RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 SIL1Q9H173 461 aa9□□□□□ -0.97
CTNND1-223ENST00000529986 PDRG1Q9NUG6 133 aa9□□□□□ -0.97
CTNND1-223ENST00000529986 TMEM132EQ6IEE7 984 aa9□□□□□ -0.97
CTNND1-223ENST00000529986 CWC27Q6UX04 472 aaKnown RBP9□□□□□ -0.97
CTNND1-223ENST00000529986 BBXQ8WY36 941 aaPredicted RBP9□□□□□ -0.97
CTNND1-223ENST00000529986 SLC4A2P04920 1241 aa8.99□□□□□ -0.97
CTNND1-223ENST00000529986 SEPT7Q16181 437 aaKnown RBP8.99□□□□□ -0.97
CTNND1-223ENST00000529986 ARHGAP29Q52LW3 1261 aa8.99□□□□□ -0.97
CTNND1-223ENST00000529986 CDK5RAP3Q96JB5 506 aa8.99□□□□□ -0.97
CTNND1-223ENST00000529986 CRACR2AQ9BSW2 395 aa8.99□□□□□ -0.97
CTNND1-223ENST00000529986 GDPD2Q9HCC8 539 aa8.99□□□□□ -0.97
CTNND1-223ENST00000529986 RBM27Q9P2N5 1060 aaKnown RBP8.99□□□□□ -0.97
CTNND1-223ENST00000529986 CDK13Q14004 1512 aaKnown RBP8.99□□□□□ -0.97
CTNND1-223ENST00000529986 ATF7IPQ6VMQ6 1270 aa8.99□□□□□ -0.97
CTNND1-223ENST00000529986 KIF18AQ8NI77 898 aa8.99□□□□□ -0.97
CTNND1-223ENST00000529986 JMYQ8N9B5 988 aa8.99□□□□□ -0.97
CTNND1-223ENST00000529986 DDX54Q8TDD1 881 aaKnown RBP8.99□□□□□ -0.97
CTNND1-223ENST00000529986 TXLNAP40222 546 aa8.98□□□□□ -0.97
CTNND1-223ENST00000529986 ZNF830Q96NB3 372 aaPredicted RBP8.98□□□□□ -0.97
CTNND1-223ENST00000529986 IL1RAPL2Q9NP60 686 aa8.98□□□□□ -0.97
CTNND1-223ENST00000529986 SHTN1A0MZ66 631 aa8.98□□□□□ -0.97
CTNND1-223ENST00000529986 EPB41L2O43491 1005 aaKnown RBP8.98□□□□□ -0.97
CTNND1-223ENST00000529986 PANK2Q9BZ23 570 aa8.98□□□□□ -0.97
CTNND1-223ENST00000529986 WDR97A6NE52 1622 aa8.98□□□□□ -0.97
CTNND1-223ENST00000529986 SART3Q15020 963 aaKnown RBP8.98□□□□□ -0.97
CTNND1-223ENST00000529986 CKAP2LQ8IYA6 745 aa8.98□□□□□ -0.97
CTNND1-223ENST00000529986 SFPQP23246 707 aaKnown RBP eCLIP8.98□□□□□ -0.971e-8■■■□□ 15.1
CTNND1-223ENST00000529986 RNF187Q5TA31 235 aaPredicted RBP8.98□□□□□ -0.97
CTNND1-223ENST00000529986 CCDC83Q8IWF9 413 aa8.98□□□□□ -0.97
CTNND1-223ENST00000529986 ZHX3Q9H4I2 956 aa8.98□□□□□ -0.97
CTNND1-223ENST00000529986 CLIP2Q9UDT6 1046 aa8.98□□□□□ -0.97
CTNND1-223ENST00000529986 IGSF3O75054 1194 aa8.98□□□□□ -0.97
CTNND1-223ENST00000529986 KRT18P05783 430 aaKnown RBP8.98□□□□□ -0.97
CTNND1-223ENST00000529986 KIAA1328Q86T90 577 aa8.98□□□□□ -0.97
CTNND1-223ENST00000529986 PIP4K2AP48426 406 aaPredicted RBP8.97□□□□□ -0.97
CTNND1-223ENST00000529986 NBPF1Q3BBV0 1214 aa8.97□□□□□ -0.97
CTNND1-223ENST00000529986 BLOC1S2Q6QNY1 142 aa8.97□□□□□ -0.97
CTNND1-223ENST00000529986 CCAR1Q8IX12 1150 aaKnown RBP8.97□□□□□ -0.97
CTNND1-223ENST00000529986 DACH1Q9UI36 760 aa8.97□□□□□ -0.97
CTNND1-223ENST00000529986 CCDC30Q5VVM6 783 aa8.97□□□□□ -0.97
CTNND1-223ENST00000529986 LARP6Q9BRS8 491 aaKnown RBP8.97□□□□□ -0.97
CTNND1-223ENST00000529986 CASTP20810 708 aaKnown RBP8.97□□□□□ -0.97
CTNND1-223ENST00000529986 DHX8Q14562 1220 aaKnown RBP8.97□□□□□ -0.97
CTNND1-223ENST00000529986 SYCP1Q15431 976 aa8.97□□□□□ -0.97
CTNND1-223ENST00000529986 ZRSR2Q15696 482 aaKnown RBP8.97□□□□□ -0.97
CTNND1-223ENST00000529986 NBPF8Q3BBV2 869 aa8.97□□□□□ -0.97
CTNND1-223ENST00000529986 ZBTB9Q96C00 473 aa8.97□□□□□ -0.97
CTNND1-223ENST00000529986 FAM177BA6PVY3 158 aa8.97□□□□□ -0.97
CTNND1-223ENST00000529986 HIP1O00291 1037 aa8.97□□□□□ -0.97
CTNND1-223ENST00000529986 CASQ1P31415 396 aa8.97□□□□□ -0.97
CTNND1-223ENST00000529986 LMAN1P49257 510 aa8.97□□□□□ -0.97
CTNND1-223ENST00000529986 EVA1CP58658 441 aa8.97□□□□□ -0.97
CTNND1-223ENST00000529986 ANKRD1Q15327 319 aa8.97□□□□□ -0.97
CTNND1-223ENST00000529986 NAIPQ13075 1403 aa8.96□□□□□ -0.97
CTNND1-223ENST00000529986 CCDC183Q5T5S1 534 aa8.96□□□□□ -0.97
CTNND1-223ENST00000529986 ADCY5O95622 1261 aa8.96□□□□□ -0.97
CTNND1-223ENST00000529986 CCDC113Q9H0I3 377 aa8.96□□□□□ -0.97
CTNND1-223ENST00000529986 CFAP45Q9UL16 551 aa8.96□□□□□ -0.97
CTNND1-223ENST00000529986 GOLGA6L10A0A0M3HER8 536 aa8.96□□□□□ -0.98
CTNND1-223ENST00000529986 SMARCA5O60264 1052 aaPredicted RBP8.96□□□□□ -0.98
CTNND1-223ENST00000529986 KIF4BQ2VIQ3 1234 aa8.96□□□□□ -0.98
CTNND1-223ENST00000529986 RBM33Q96EV2 1170 aaKnown RBP8.96□□□□□ -0.98
CTNND1-223ENST00000529986 SEPT11Q9NVA2 429 aaKnown RBP8.96□□□□□ -0.98
CTNND1-223ENST00000529986 SCAPERQ9BY12 1400 aa8.96□□□□□ -0.98
CTNND1-223ENST00000529986 DNA2P51530 1060 aa8.96□□□□□ -0.98
CTNND1-223ENST00000529986 TMEM57Q8N5G2 664 aa8.96□□□□□ -0.98
CTNND1-223ENST00000529986 NUP133Q8WUM0 1156 aa8.96□□□□□ -0.98
CTNND1-223ENST00000529986 INCENPQ9NQS7 918 aa8.96□□□□□ -0.98
CTNND1-223ENST00000529986 KIF14Q15058 1648 aa8.96□□□□□ -0.98
CTNND1-223ENST00000529986 JAKMIP3Q5VZ66 844 aa8.96□□□□□ -0.98
CTNND1-223ENST00000529986 RAI14Q9P0K7 980 aa8.96□□□□□ -0.98
CTNND1-223ENST00000529986 SMTNL1A8MU46 457 aa8.95□□□□□ -0.98
CTNND1-223ENST00000529986 DYNC1I1O14576 645 aa8.95□□□□□ -0.98
CTNND1-223ENST00000529986 SRRTQ9BXP5 876 aaKnown RBP8.95□□□□□ -0.98
CTNND1-223ENST00000529986 IKQ13123 557 aaPredicted RBP8.95□□□□□ -0.98
CTNND1-223ENST00000529986 NUTM1Q86Y26 1132 aa8.95□□□□□ -0.98
CTNND1-223ENST00000529986 CCDC148Q8NFR7 591 aa8.95□□□□□ -0.98
CTNND1-223ENST00000529986 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.95□□□□□ -0.98
CTNND1-223ENST00000529986 XRCC6P12956 609 aaKnown RBP eCLIP8.95□□□□□ -0.982e-8■□□□□ 8.5
CTNND1-223ENST00000529986 EIF5P55010 431 aaKnown RBP8.95□□□□□ -0.98
CTNND1-223ENST00000529986 IQCEQ6IPM2 695 aa8.95□□□□□ -0.98
CTNND1-223ENST00000529986 ZSWIM4Q9H7M6 989 aa8.95□□□□□ -0.98
CTNND1-223ENST00000529986 TBC1D2BQ9UPU7 963 aa8.95□□□□□ -0.98
CTNND1-223ENST00000529986 PHF23Q9BUL5 403 aaPredicted RBP8.95□□□□□ -0.98
CTNND1-223ENST00000529986 PPP6R1Q9UPN7 881 aa8.95□□□□□ -0.98
CTNND1-223ENST00000529986 CAMSAP2Q08AD1 1489 aa8.95□□□□□ -0.98
CTNND1-223ENST00000529986 STIM1Q13586 685 aa8.94□□□□□ -0.98
CTNND1-223ENST00000529986 CPLX3Q8WVH0 158 aa8.94□□□□□ -0.98
CTNND1-223ENST00000529986 TIGD1Q96MW7 591 aa8.94□□□□□ -0.98
CTNND1-223ENST00000529986 BCCIPQ9P287 314 aaKnown RBP eCLIP8.94□□□□□ -0.981e-6■■■■□ 21.2
CTNND1-223ENST00000529986 KLHL10Q6JEL2 608 aa8.94□□□□□ -0.98
CTNND1-223ENST00000529986 CNKSR2Q8WXI2 1034 aa8.94□□□□□ -0.98
CTNND1-223ENST00000529986 PIBF1Q8WXW3 757 aa8.94□□□□□ -0.98
CTNND1-223ENST00000529986 LUC7LQ9NQ29 371 aaKnown RBP8.94□□□□□ -0.98
CTNND1-223ENST00000529986 MAP2K1Q02750 393 aaPredicted RBP8.94□□□□□ -0.98
CTNND1-223ENST00000529986 GBP3Q9H0R5 595 aa8.94□□□□□ -0.98
CTNND1-223ENST00000529986 EXOC6BQ9Y2D4 811 aa8.94□□□□□ -0.98
CTNND1-223ENST00000529986 KIF2AO00139 706 aaPredicted RBP8.94□□□□□ -0.98
CTNND1-223ENST00000529986 CLCN1P35523 988 aa8.94□□□□□ -0.98
CTNND1-223ENST00000529986 ZSCAN31Q96LW9 406 aaPredicted RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms