RNA–Protein interactions for RNA: ENST00000529670.5

LRP8-212, Transcript of LDL receptor related protein 8, humanhuman

TSL 5

Gene LRP8, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-212ENST00000529670 WASLO00401 505 aaPredicted RBP7.25□□□□□ -1.25
LRP8-212ENST00000529670 TBC1D12O60347 775 aa7.25□□□□□ -1.25
LRP8-212ENST00000529670 SAFB2Q14151 953 aaKnown RBP eCLIP7.25□□□□□ -1.25
LRP8-212ENST00000529670 FAM196AQ6ZSG2 479 aa7.25□□□□□ -1.25
LRP8-212ENST00000529670 NGDNQ8NEJ9 315 aaKnown RBP7.25□□□□□ -1.25
LRP8-212ENST00000529670 PRDM11Q9NQV5 511 aa7.25□□□□□ -1.25
LRP8-212ENST00000529670 PCDHGA4Q9Y5G9 962 aa7.25□□□□□ -1.25
LRP8-212ENST00000529670 THSD7AQ9UPZ6 1657 aa7.25□□□□□ -1.25
LRP8-212ENST00000529670 PAXIP1Q6ZW49 1069 aaPredicted RBP7.24□□□□□ -1.25
LRP8-212ENST00000529670 DDX27Q96GQ7 796 aaKnown RBP7.24□□□□□ -1.25
LRP8-212ENST00000529670 CFAP44Q96MT7 982 aa7.24□□□□□ -1.25
LRP8-212ENST00000529670 LARP6Q9BRS8 491 aaKnown RBP7.24□□□□□ -1.25
LRP8-212ENST00000529670 SPATA31A1Q5TZJ5 1347 aa7.24□□□□□ -1.25
LRP8-212ENST00000529670 ITSN1Q15811 1721 aa7.24□□□□□ -1.25
LRP8-212ENST00000529670 PSDA5PKW4 1024 aaPredicted RBP7.23□□□□□ -1.25
LRP8-212ENST00000529670 EN1Q05925 392 aaPredicted RBP7.23□□□□□ -1.25
LRP8-212ENST00000529670 VARS2Q5ST30 1063 aaKnown RBP7.23□□□□□ -1.25
LRP8-212ENST00000529670 BARGINQ6ZT62 677 aa7.23□□□□□ -1.25
LRP8-212ENST00000529670 PTCD2Q8WV60 388 aaKnown RBP7.23□□□□□ -1.25
LRP8-212ENST00000529670 TRAK1Q9UPV9 953 aa7.23□□□□□ -1.25
LRP8-212ENST00000529670 MINK1Q8N4C8 1332 aaPredicted RBP7.23□□□□□ -1.25
LRP8-212ENST00000529670 PRR36Q9H6K5 1346 aa7.23□□□□□ -1.25
LRP8-212ENST00000529670 BRD4O60885 1362 aaPredicted RBP7.22□□□□□ -1.25
LRP8-212ENST00000529670 CRYBG1Q9Y4K1 1723 aa7.22□□□□□ -1.25
LRP8-212ENST00000529670 NUDT7P0C024 238 aa7.22□□□□□ -1.25
LRP8-212ENST00000529670 R3HDM1Q15032 1099 aaKnown RBP7.22□□□□□ -1.25
LRP8-212ENST00000529670 NBPF8Q3BBV2 869 aa7.22□□□□□ -1.25
LRP8-212ENST00000529670 NBPF14Q5TI25 921 aa7.22□□□□□ -1.25
LRP8-212ENST00000529670 HIRIP3Q9BW71 556 aaPredicted RBP7.22□□□□□ -1.25
LRP8-212ENST00000529670 POLR3AO14802 1390 aaPredicted RBP7.21□□□□□ -1.25
LRP8-212ENST00000529670 KIAA0232Q92628 1395 aa7.21□□□□□ -1.25
LRP8-212ENST00000529670 ZNF316A6NFI3 1004 aaPredicted RBP7.21□□□□□ -1.26
LRP8-212ENST00000529670 EVA1CP58658 441 aa7.21□□□□□ -1.26
LRP8-212ENST00000529670 TRIM26Q12899 539 aaPredicted RBP7.21□□□□□ -1.26
LRP8-212ENST00000529670 PDE3BQ13370 1112 aa7.21□□□□□ -1.26
LRP8-212ENST00000529670 MFSD10Q14728 455 aa7.21□□□□□ -1.26
LRP8-212ENST00000529670 DCAF11Q8TEB1 546 aa7.21□□□□□ -1.26
LRP8-212ENST00000529670 KHSRPQ92945 711 aaKnown RBP eCLIP7.21□□□□□ -1.26
LRP8-212ENST00000529670 NUDT16Q96DE0 195 aaKnown RBP7.21□□□□□ -1.26
LRP8-212ENST00000529670 CAMKK2Q96RR4 588 aa7.21□□□□□ -1.26
LRP8-212ENST00000529670 THRAP3Q9Y2W1 955 aaKnown RBP7.21□□□□□ -1.26
LRP8-212ENST00000529670 TNS1Q9HBL0 1735 aaKnown RBP7.21□□□□□ -1.26
LRP8-212ENST00000529670 CPDO75976 1380 aa7.2□□□□□ -1.26
LRP8-212ENST00000529670 PLEKHG3A1L390 1219 aa7.2□□□□□ -1.26
LRP8-212ENST00000529670 APBA3O96018 575 aa7.2□□□□□ -1.26
LRP8-212ENST00000529670 TCP11L2Q8N4U5 519 aa7.2□□□□□ -1.26
LRP8-212ENST00000529670 RAB3GAP2Q9H2M9 1393 aa7.2□□□□□ -1.26
LRP8-212ENST00000529670 SSH2Q76I76 1423 aa7.19□□□□□ -1.26
LRP8-212ENST00000529670 TRIM37O94972 964 aa7.19□□□□□ -1.26
LRP8-212ENST00000529670 EZH2Q15910 746 aaKnown RBP7.19□□□□□ -1.26
LRP8-212ENST00000529670 NLRP13Q86W25 1043 aa7.19□□□□□ -1.26
LRP8-212ENST00000529670 STRN4Q9NRL3 753 aa7.19□□□□□ -1.26
LRP8-212ENST00000529670 KDM2AQ9Y2K7 1162 aa7.19□□□□□ -1.26
LRP8-212ENST00000529670 USP19O94966 1318 aa7.19□□□□□ -1.26
LRP8-212ENST00000529670 PHRF1Q9P1Y6 1649 aaKnown RBP7.19□□□□□ -1.26
LRP8-212ENST00000529670 ARHGEF28Q8N1W1 1705 aaKnown RBP7.18□□□□□ -1.26
LRP8-212ENST00000529670 POTEB3A0JP26 581 aa7.18□□□□□ -1.26
LRP8-212ENST00000529670 SLC24A1O60721 1099 aa7.18□□□□□ -1.26
LRP8-212ENST00000529670 FAM182BQ5T319 152 aa7.18□□□□□ -1.26
LRP8-212ENST00000529670 POTEBQ6S5H4 581 aa7.18□□□□□ -1.26
LRP8-212ENST00000529670 OXER1Q8TDS5 423 aa7.18□□□□□ -1.26
LRP8-212ENST00000529670 CDK19Q9BWU1 502 aa7.18□□□□□ -1.26
LRP8-212ENST00000529670 PLSCR2Q9NRY7 297 aa7.18□□□□□ -1.26
LRP8-212ENST00000529670 ACEP12821 1306 aa7.18□□□□□ -1.26
LRP8-212ENST00000529670 KIAA1210Q9ULL0 1709 aa7.18□□□□□ -1.26
LRP8-212ENST00000529670 TOPAZ1Q8N9V7 1692 aa7.17□□□□□ -1.26
LRP8-212ENST00000529670 RREB1Q92766 1687 aa7.17□□□□□ -1.26
LRP8-212ENST00000529670 ZC3H6P61129 1189 aaKnown RBP7.17□□□□□ -1.26
LRP8-212ENST00000529670 CHRNA2Q15822 529 aa7.17□□□□□ -1.26
LRP8-212ENST00000529670 ZNF687Q8N1G0 1237 aa7.17□□□□□ -1.26
LRP8-212ENST00000529670 ABTB2Q8N961 1025 aa7.17□□□□□ -1.26
LRP8-212ENST00000529670 CDCA7Q9BWT1 371 aaPredicted RBP7.17□□□□□ -1.26
LRP8-212ENST00000529670 SPON1Q9HCB6 807 aa7.17□□□□□ -1.26
LRP8-212ENST00000529670 LHX6Q9UPM6 363 aa7.17□□□□□ -1.26
LRP8-212ENST00000529670 NINLQ9Y2I6 1382 aa7.17□□□□□ -1.26
LRP8-212ENST00000529670 NRKQ7Z2Y5 1582 aa7.16□□□□□ -1.26
LRP8-212ENST00000529670 RGPD3A6NKT7 1758 aaPredicted RBP7.16□□□□□ -1.26
LRP8-212ENST00000529670 RGPD4Q7Z3J3 1758 aa7.16□□□□□ -1.26
LRP8-212ENST00000529670 PLSCR1O15162 318 aa7.16□□□□□ -1.26
LRP8-212ENST00000529670 KCNQ2O43526 872 aa7.16□□□□□ -1.26
LRP8-212ENST00000529670 GCP02774 474 aa7.16□□□□□ -1.26
LRP8-212ENST00000529670 PPP1R1BQ9UD71 204 aaPredicted RBP7.16□□□□□ -1.26
LRP8-212ENST00000529670 AATKQ6ZMQ8 1374 aa7.16□□□□□ -1.26
LRP8-212ENST00000529670 OVOS2A0A0G2JMS6 1433 aa7.16□□□□□ -1.26
LRP8-212ENST00000529670 OVOS2A0A0J9YW53 1432 aa7.16□□□□□ -1.26
LRP8-212ENST00000529670 CRB1P82279 1406 aa7.16□□□□□ -1.26
LRP8-212ENST00000529670 OVOS2Q6IE36 1432 aa7.16□□□□□ -1.26
LRP8-212ENST00000529670 LMO7Q8WWI1 1683 aa7.16□□□□□ -1.26
LRP8-212ENST00000529670 CAMTA1Q9Y6Y1 1673 aa7.16□□□□□ -1.26
LRP8-212ENST00000529670 PARP4Q9UKK3 1724 aaKnown RBP7.15□□□□□ -1.26
LRP8-212ENST00000529670 YY1P25490 414 aa7.15□□□□□ -1.26
LRP8-212ENST00000529670 LARP1Q6PKG0 1096 aaKnown RBP7.15□□□□□ -1.26
LRP8-212ENST00000529670 USP35Q9P2H5 1018 aa7.15□□□□□ -1.26
LRP8-212ENST00000529670 BCL9O00512 1426 aa7.15□□□□□ -1.27
LRP8-212ENST00000529670 NUP188Q5SRE5 1749 aa7.15□□□□□ -1.27
LRP8-212ENST00000529670 COL5A2P05997 1499 aaPredicted RBP7.14□□□□□ -1.27
LRP8-212ENST00000529670 SRPK2P78362 688 aaKnown RBP7.14□□□□□ -1.27
LRP8-212ENST00000529670 NUTM2GQ5VZR2 741 aa7.14□□□□□ -1.27
LRP8-212ENST00000529670 PPIP5K1Q6PFW1 1433 aa7.14□□□□□ -1.27
LRP8-212ENST00000529670 PCGF6Q9BYE7 350 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms