RNA–Protein interactions for RNA: ENST00000529469.1

SOX6-212, Transcript of SRY-box 6, humanhuman

TSL 4

Gene SOX6, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-212ENST00000529469 ARID3AQ99856 593 aa8.67□□□□□ -1.02
SOX6-212ENST00000529469 OSBPL3Q9H4L5 887 aa8.67□□□□□ -1.02
SOX6-212ENST00000529469 MYCP01106 439 aaPredicted RBP8.66□□□□□ -1.02
SOX6-212ENST00000529469 BMP1P13497 986 aa8.66□□□□□ -1.02
SOX6-212ENST00000529469 Q6ZVU0 165 aa8.66□□□□□ -1.02
SOX6-212ENST00000529469 AAASQ9NRG9 546 aa8.66□□□□□ -1.02
SOX6-212ENST00000529469 AXIN1O15169 862 aa8.65□□□□□ -1.02
SOX6-212ENST00000529469 ADH1AP07327 375 aa8.65□□□□□ -1.02
SOX6-212ENST00000529469 RFX1P22670 979 aa8.65□□□□□ -1.02
SOX6-212ENST00000529469 USP4Q13107 963 aa8.65□□□□□ -1.02
SOX6-212ENST00000529469 AGBL1Q96MI9 1066 aa8.65□□□□□ -1.02
SOX6-212ENST00000529469 LZTS3O60299 673 aaPredicted RBP8.64□□□□□ -1.03
SOX6-212ENST00000529469 KDF1Q8NAX2 398 aaPredicted RBP8.64□□□□□ -1.03
SOX6-212ENST00000529469 NOD1Q9Y239 953 aa8.64□□□□□ -1.03
SOX6-212ENST00000529469 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.63□□□□□ -1.03
SOX6-212ENST00000529469 STAU1O95793 577 aaKnown RBP8.63□□□□□ -1.03
SOX6-212ENST00000529469 KANK4Q5T7N3 995 aaPredicted RBP8.63□□□□□ -1.03
SOX6-212ENST00000529469 TRIM46Q7Z4K8 759 aa8.63□□□□□ -1.03
SOX6-212ENST00000529469 SIRT1Q96EB6 747 aa8.63□□□□□ -1.03
SOX6-212ENST00000529469 MKRN1Q9UHC7 482 aaKnown RBP8.63□□□□□ -1.03
SOX6-212ENST00000529469 DACH1Q9UI36 760 aa8.63□□□□□ -1.03
SOX6-212ENST00000529469 ATP5J2-PTCD1G3V325 749 aa8.62□□□□□ -1.03
SOX6-212ENST00000529469 GTF2IP78347 998 aa8.62□□□□□ -1.03
SOX6-212ENST00000529469 RELBQ01201 579 aa8.62□□□□□ -1.03
SOX6-212ENST00000529469 MRPL14Q6P1L8 145 aaKnown RBP8.62□□□□□ -1.03
SOX6-212ENST00000529469 CYP2U1Q7Z449 544 aa8.62□□□□□ -1.03
SOX6-212ENST00000529469 LINC00528Q8N1L1 170 aa8.62□□□□□ -1.03
SOX6-212ENST00000529469 TRIM52Q96A61 297 aa8.62□□□□□ -1.03
SOX6-212ENST00000529469 ESF1Q9H501 851 aaKnown RBP8.62□□□□□ -1.03
SOX6-212ENST00000529469 PCDHGA11Q9Y5H2 935 aa8.62□□□□□ -1.03
SOX6-212ENST00000529469 CLDN10P78369 228 aa8.61□□□□□ -1.03
SOX6-212ENST00000529469 CDCA8Q53HL2 280 aa8.61□□□□□ -1.03
SOX6-212ENST00000529469 KIAA1024Q9UPX6 916 aa8.61□□□□□ -1.03
SOX6-212ENST00000529469 SRPK2P78362 688 aaKnown RBP8.6□□□□□ -1.03
SOX6-212ENST00000529469 CRTC2Q53ET0 693 aaPredicted RBP8.6□□□□□ -1.03
SOX6-212ENST00000529469 C6orf118Q5T5N4 469 aa8.6□□□□□ -1.03
SOX6-212ENST00000529469 TSEN34Q9BSV6 310 aaKnown RBP8.6□□□□□ -1.03
SOX6-212ENST00000529469 ARHGEF10LQ9HCE6 1279 aa8.6□□□□□ -1.03
SOX6-212ENST00000529469 ATP13A2Q9NQ11 1180 aa8.6□□□□□ -1.03
SOX6-212ENST00000529469 RAB6BQ9NRW1 208 aa8.6□□□□□ -1.03
SOX6-212ENST00000529469 PTGIRP43119 386 aa8.59□□□□□ -1.03
SOX6-212ENST00000529469 TRIM50Q86XT4 487 aa8.59□□□□□ -1.03
SOX6-212ENST00000529469 OGFOD1Q8N543 542 aa8.59□□□□□ -1.03
SOX6-212ENST00000529469 ZNF594Q96JF6 807 aaPredicted RBP8.59□□□□□ -1.03
SOX6-212ENST00000529469 PURBQ96QR8 312 aaKnown RBP8.59□□□□□ -1.03
SOX6-212ENST00000529469 ZNF395Q9H8N7 513 aaPredicted RBP8.59□□□□□ -1.03
SOX6-212ENST00000529469 VRTNQ9H8Y1 702 aa8.59□□□□□ -1.03
SOX6-212ENST00000529469 BMP2P12643 396 aa8.58□□□□□ -1.04
SOX6-212ENST00000529469 RASA1P20936 1047 aa8.58□□□□□ -1.04
SOX6-212ENST00000529469 SCNN1DP51172 638 aa8.58□□□□□ -1.04
SOX6-212ENST00000529469 PSME1Q06323 249 aa8.58□□□□□ -1.04
SOX6-212ENST00000529469 PBXIP1Q96AQ6 731 aa8.58□□□□□ -1.04
SOX6-212ENST00000529469 ETNK1Q9HBU6 452 aa8.58□□□□□ -1.04
SOX6-212ENST00000529469 A0A1W2PRU2 124 aa8.57□□□□□ -1.04
SOX6-212ENST00000529469 USP17L15C9J2P7 530 aa8.57□□□□□ -1.04
SOX6-212ENST00000529469 USP17L10C9JJH3 530 aa8.57□□□□□ -1.04
SOX6-212ENST00000529469 USP17L13C9JLJ4 530 aa8.57□□□□□ -1.04
SOX6-212ENST00000529469 USP17L12C9JPN9 530 aa8.57□□□□□ -1.04
SOX6-212ENST00000529469 USP17L11C9JVI0 530 aa8.57□□□□□ -1.04
SOX6-212ENST00000529469 USP17L21D6R901 530 aa8.57□□□□□ -1.04
SOX6-212ENST00000529469 USP17L18D6R9N7 530 aa8.57□□□□□ -1.04
SOX6-212ENST00000529469 USP17L22D6RA61 530 aa8.57□□□□□ -1.04
SOX6-212ENST00000529469 USP17L17D6RBQ6 530 aa8.57□□□□□ -1.04
SOX6-212ENST00000529469 USP17L19D6RCP7 530 aa8.57□□□□□ -1.04
SOX6-212ENST00000529469 USP17L20D6RJB6 530 aa8.57□□□□□ -1.04
SOX6-212ENST00000529469 ZBTB7BO15156 539 aaPredicted RBP8.57□□□□□ -1.04
SOX6-212ENST00000529469 UPP2O95045 317 aa8.57□□□□□ -1.04
SOX6-212ENST00000529469 GNRH1P01148 92 aa8.57□□□□□ -1.04
SOX6-212ENST00000529469 ATP1A2P50993 1020 aa8.57□□□□□ -1.04
SOX6-212ENST00000529469 USP17L24Q0WX57 530 aa8.57□□□□□ -1.04
SOX6-212ENST00000529469 TPCN2Q8NHX9 752 aa8.57□□□□□ -1.04
SOX6-212ENST00000529469 ZFP42Q96MM3 310 aa8.57□□□□□ -1.04
SOX6-212ENST00000529469 INSM2Q96T92 566 aaPredicted RBP8.57□□□□□ -1.04
SOX6-212ENST00000529469 DNAAF2Q9NVR5 837 aaKnown RBP8.57□□□□□ -1.04
SOX6-212ENST00000529469 FAM196BA6NMK8 535 aa8.56□□□□□ -1.04
SOX6-212ENST00000529469 TMEM229AB2RXF0 380 aa8.56□□□□□ -1.04
SOX6-212ENST00000529469 SPINT1O43278 529 aa8.56□□□□□ -1.04
SOX6-212ENST00000529469 IL2RAP01589 272 aa8.56□□□□□ -1.04
SOX6-212ENST00000529469 PTK7Q13308 1070 aa8.56□□□□□ -1.04
SOX6-212ENST00000529469 MEN1O00255 615 aa8.55□□□□□ -1.04
SOX6-212ENST00000529469 DKK1O94907 266 aa8.55□□□□□ -1.04
SOX6-212ENST00000529469 CTSOP43234 321 aaPredicted RBP8.55□□□□□ -1.04
SOX6-212ENST00000529469 GDF10P55107 478 aa8.55□□□□□ -1.04
SOX6-212ENST00000529469 CLN3Q13286 438 aa8.55□□□□□ -1.04
SOX6-212ENST00000529469 SCARF1Q14162 830 aa8.55□□□□□ -1.04
SOX6-212ENST00000529469 SIX5Q8N196 739 aa8.55□□□□□ -1.04
SOX6-212ENST00000529469 LARGE2Q8N3Y3 721 aa8.55□□□□□ -1.04
SOX6-212ENST00000529469 CCDC102BQ68D86 513 aa8.54□□□□□ -1.04
SOX6-212ENST00000529469 LARP1Q6PKG0 1096 aaKnown RBP8.54□□□□□ -1.04
SOX6-212ENST00000529469 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.54□□□□□ -1.04
SOX6-212ENST00000529469 ZNF358Q9NW07 568 aa8.54□□□□□ -1.04
SOX6-212ENST00000529469 WASLO00401 505 aaPredicted RBP8.53□□□□□ -1.04
SOX6-212ENST00000529469 INHAP05111 366 aa8.53□□□□□ -1.04
SOX6-212ENST00000529469 FOXD4L5Q5VV16 416 aaPredicted RBP8.53□□□□□ -1.04
SOX6-212ENST00000529469 CNKSR1Q969H4 720 aa8.53□□□□□ -1.04
SOX6-212ENST00000529469 ARXQ96QS3 562 aa8.53□□□□□ -1.04
SOX6-212ENST00000529469 POLMQ9NP87 494 aaPredicted RBP8.53□□□□□ -1.04
SOX6-212ENST00000529469 GMPR2Q9P2T1 348 aaKnown RBP8.53□□□□□ -1.04
SOX6-212ENST00000529469 ZMIZ1Q9ULJ6 1067 aa8.53□□□□□ -1.04
SOX6-212ENST00000529469 HRH3Q9Y5N1 445 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms