RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 RBM6P78332 1123 aaKnown RBP8.56□□□□□ -1.04
ATPAF1-209ENST00000529214 VPS72Q15906 364 aa8.56□□□□□ -1.04
ATPAF1-209ENST00000529214 KCNV2Q8TDN2 545 aa8.56□□□□□ -1.04
ATPAF1-209ENST00000529214 AXIN2Q9Y2T1 843 aa8.56□□□□□ -1.04
ATPAF1-209ENST00000529214 OVOS2A0A0J9YW53 1432 aa8.55□□□□□ -1.04
ATPAF1-209ENST00000529214 OVOS2Q6IE36 1432 aa8.55□□□□□ -1.04
ATPAF1-209ENST00000529214 MYOM1P52179 1685 aa8.55□□□□□ -1.04
ATPAF1-209ENST00000529214 AATKQ6ZMQ8 1374 aa8.55□□□□□ -1.04
ATPAF1-209ENST00000529214 EVA1CP58658 441 aa8.55□□□□□ -1.04
ATPAF1-209ENST00000529214 RNF25Q96BH1 459 aaPredicted RBP8.55□□□□□ -1.04
ATPAF1-209ENST00000529214 KNSTRNQ9Y448 316 aa8.55□□□□□ -1.04
ATPAF1-209ENST00000529214 ABCA3Q99758 1704 aa8.55□□□□□ -1.04
ATPAF1-209ENST00000529214 MARF1Q9Y4F3 1742 aaKnown RBP8.55□□□□□ -1.04
ATPAF1-209ENST00000529214 ATRNO75882 1429 aa8.55□□□□□ -1.04
ATPAF1-209ENST00000529214 PHRF1Q9P1Y6 1649 aaKnown RBP8.55□□□□□ -1.04
ATPAF1-209ENST00000529214 MIER1Q8N108 512 aa8.54□□□□□ -1.04
ATPAF1-209ENST00000529214 ONECUT3O60422 494 aaPredicted RBP8.53□□□□□ -1.04
ATPAF1-209ENST00000529214 IP6K1Q92551 441 aa8.53□□□□□ -1.04
ATPAF1-209ENST00000529214 STRN4Q9NRL3 753 aa8.53□□□□□ -1.04
ATPAF1-209ENST00000529214 COL14A1Q05707 1796 aaKnown RBP8.53□□□□□ -1.04
ATPAF1-209ENST00000529214 NFAT5O94916 1531 aa8.53□□□□□ -1.04
ATPAF1-209ENST00000529214 CAMTA1Q9Y6Y1 1673 aa8.53□□□□□ -1.04
ATPAF1-209ENST00000529214 LARP1Q6PKG0 1096 aaKnown RBP8.52□□□□□ -1.05
ATPAF1-209ENST00000529214 USP54Q70EL1 1684 aa8.52□□□□□ -1.05
ATPAF1-209ENST00000529214 MAP3K19Q56UN5 1328 aa8.52□□□□□ -1.05
ATPAF1-209ENST00000529214 SPATA31A5Q5VU36 1347 aa8.52□□□□□ -1.05
ATPAF1-209ENST00000529214 SPATA31A7Q8IWB4 1347 aa8.52□□□□□ -1.05
ATPAF1-209ENST00000529214 AMPHP49418 695 aa8.51□□□□□ -1.05
ATPAF1-209ENST00000529214 RRS1Q15050 365 aaKnown RBP8.51□□□□□ -1.05
ATPAF1-209ENST00000529214 C1orf115Q9H7X2 142 aa8.51□□□□□ -1.05
ATPAF1-209ENST00000529214 NWD2Q9ULI1 1742 aa8.51□□□□□ -1.05
ATPAF1-209ENST00000529214 SPATA31A1Q5TZJ5 1347 aa8.51□□□□□ -1.05
ATPAF1-209ENST00000529214 HOXC9P31274 260 aa8.51□□□□□ -1.05
ATPAF1-209ENST00000529214 MORC1Q86VD1 984 aa8.51□□□□□ -1.05
ATPAF1-209ENST00000529214 RYDENQ9NUL5 291 aaKnown RBP8.51□□□□□ -1.05
ATPAF1-209ENST00000529214 ZBTB47Q9UFB7 747 aaPredicted RBP8.51□□□□□ -1.05
ATPAF1-209ENST00000529214 NSD2O96028 1365 aa8.5□□□□□ -1.05
ATPAF1-209ENST00000529214 PLCH1Q4KWH8 1693 aa8.5□□□□□ -1.05
ATPAF1-209ENST00000529214 LMO7Q8WWI1 1683 aa8.5□□□□□ -1.05
ATPAF1-209ENST00000529214 WDR17Q8IZU2 1322 aa8.5□□□□□ -1.05
ATPAF1-209ENST00000529214 COL18A1P39060 1754 aa8.5□□□□□ -1.05
ATPAF1-209ENST00000529214 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.5□□□□□ -1.05
ATPAF1-209ENST00000529214 TAF7LQ5H9L4 462 aa8.5□□□□□ -1.05
ATPAF1-209ENST00000529214 MAMSTRQ6ZN01 415 aa8.5□□□□□ -1.05
ATPAF1-209ENST00000529214 TOM1L2Q6ZVM7 507 aa8.5□□□□□ -1.05
ATPAF1-209ENST00000529214 USP35Q9P2H5 1018 aa8.5□□□□□ -1.05
ATPAF1-209ENST00000529214 POLKQ9UBT6 870 aa8.5□□□□□ -1.05
ATPAF1-209ENST00000529214 THRAP3Q9Y2W1 955 aaKnown RBP8.5□□□□□ -1.05
ATPAF1-209ENST00000529214 COL5A2P05997 1499 aaPredicted RBP8.5□□□□□ -1.05
ATPAF1-209ENST00000529214 CDK12Q9NYV4 1490 aaPredicted RBP8.5□□□□□ -1.05
ATPAF1-209ENST00000529214 ERBB3P21860 1342 aa8.49□□□□□ -1.05
ATPAF1-209ENST00000529214 CSB-PGBD3P0DP91 1061 aa8.49□□□□□ -1.05
ATPAF1-209ENST00000529214 TNNT2P45379 298 aaPredicted RBP8.49□□□□□ -1.05
ATPAF1-209ENST00000529214 FAM98CQ17RN3 349 aaKnown RBP8.49□□□□□ -1.05
ATPAF1-209ENST00000529214 HSP90AB2PQ58FF8 381 aa8.49□□□□□ -1.05
ATPAF1-209ENST00000529214 CC2D1BQ5T0F9 858 aaKnown RBP8.49□□□□□ -1.05
ATPAF1-209ENST00000529214 BARGINQ6ZT62 677 aa8.49□□□□□ -1.05
ATPAF1-209ENST00000529214 SEPT12Q8IYM1 358 aa8.49□□□□□ -1.05
ATPAF1-209ENST00000529214 TCP11L2Q8N4U5 519 aa8.49□□□□□ -1.05
ATPAF1-209ENST00000529214 ANKRD24Q8TF21 1146 aa8.49□□□□□ -1.05
ATPAF1-209ENST00000529214 CARD10Q9BWT7 1032 aa8.49□□□□□ -1.05
ATPAF1-209ENST00000529214 CHMP4AQ9BY43 222 aa8.49□□□□□ -1.05
ATPAF1-209ENST00000529214 WDR70Q9NW82 654 aa8.49□□□□□ -1.05
ATPAF1-209ENST00000529214 EMILIN1Q9Y6C2 1016 aa8.49□□□□□ -1.05
ATPAF1-209ENST00000529214 KIF24Q5T7B8 1368 aa8.49□□□□□ -1.05
ATPAF1-209ENST00000529214 NPC1L1Q9UHC9 1359 aa8.49□□□□□ -1.05
ATPAF1-209ENST00000529214 CRB1P82279 1406 aa8.48□□□□□ -1.05
ATPAF1-209ENST00000529214 GLI3P10071 1580 aa8.48□□□□□ -1.05
ATPAF1-209ENST00000529214 DDX10Q13206 875 aaKnown RBP8.48□□□□□ -1.05
ATPAF1-209ENST00000529214 NRAPQ86VF7 1730 aa8.48□□□□□ -1.05
ATPAF1-209ENST00000529214 BLMP54132 1417 aaPredicted RBP8.48□□□□□ -1.05
ATPAF1-209ENST00000529214 KIF20BQ96Q89 1820 aa8.47□□□□□ -1.05
ATPAF1-209ENST00000529214 ZNF316A6NFI3 1004 aaPredicted RBP8.47□□□□□ -1.05
ATPAF1-209ENST00000529214 STK25O00506 426 aa8.47□□□□□ -1.05
ATPAF1-209ENST00000529214 RIOK3O14730 519 aaKnown RBP8.47□□□□□ -1.05
ATPAF1-209ENST00000529214 PPM1GO15355 546 aaPredicted RBP8.47□□□□□ -1.05
ATPAF1-209ENST00000529214 LTV1Q96GA3 475 aaPredicted RBP8.47□□□□□ -1.05
ATPAF1-209ENST00000529214 CREBZFQ9NS37 354 aa8.47□□□□□ -1.05
ATPAF1-209ENST00000529214 ABCC6O95255 1503 aa8.47□□□□□ -1.05
ATPAF1-209ENST00000529214 RGS12O14924 1447 aa8.47□□□□□ -1.05
ATPAF1-209ENST00000529214 RTL1A6NKG5 1358 aa8.46□□□□□ -1.05
ATPAF1-209ENST00000529214 INSRP06213 1382 aa8.46□□□□□ -1.05
ATPAF1-209ENST00000529214 FLT4P35916 1363 aa8.46□□□□□ -1.05
ATPAF1-209ENST00000529214 SOCS7O14512 581 aa8.46□□□□□ -1.05
ATPAF1-209ENST00000529214 NLRP2Q9NX02 1062 aa8.46□□□□□ -1.05
ATPAF1-209ENST00000529214 A0A0G2JS52 829 aa8.45□□□□□ -1.06
ATPAF1-209ENST00000529214 CNGB1Q14028 1251 aaPredicted RBP8.45□□□□□ -1.06
ATPAF1-209ENST00000529214 NBPF6Q5VWK0 638 aa8.45□□□□□ -1.06
ATPAF1-209ENST00000529214 NBPF4Q96M43 638 aa8.45□□□□□ -1.06
ATPAF1-209ENST00000529214 CDCA7Q9BWT1 371 aaPredicted RBP8.45□□□□□ -1.06
ATPAF1-209ENST00000529214 LTN1O94822 1766 aa8.45□□□□□ -1.06
ATPAF1-209ENST00000529214 RGPD5Q99666 1765 aa8.45□□□□□ -1.06
ATPAF1-209ENST00000529214 C7P10643 843 aa8.45□□□□□ -1.06
ATPAF1-209ENST00000529214 MTHFSP49914 203 aa8.45□□□□□ -1.06
ATPAF1-209ENST00000529214 KRT27Q7Z3Y8 459 aa8.45□□□□□ -1.06
ATPAF1-209ENST00000529214 SLC39A7Q92504 469 aa8.45□□□□□ -1.06
ATPAF1-209ENST00000529214 NECTIN2Q92692 538 aa8.45□□□□□ -1.06
ATPAF1-209ENST00000529214 METRNQ9UJH8 293 aa8.45□□□□□ -1.06
ATPAF1-209ENST00000529214 BRD2P25440 801 aaKnown RBP8.44□□□□□ -1.06
ATPAF1-209ENST00000529214 PHF12Q96QT6 1004 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms