RNA–Protein interactions for RNA: ENST00000529054.5

MS4A6A-210, Transcript of membrane spanning 4-domains A6A, humanhuman

TSL 5 BASIC

Gene MS4A6A, Length 1,160 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6A-210ENST00000529054 PCDHB11Q9Y5F2 797 aa11.69□□□□□ -0.54
MS4A6A-210ENST00000529054 ATP5J2-PTCD1G3V325 749 aa11.68□□□□□ -0.54
MS4A6A-210ENST00000529054 CC2D2BQ6DHV5 1058 aa11.68□□□□□ -0.54
MS4A6A-210ENST00000529054 CCDC155Q8N6L0 562 aa11.68□□□□□ -0.54
MS4A6A-210ENST00000529054 SLC35F4A4IF30 521 aa11.67□□□□□ -0.54
MS4A6A-210ENST00000529054 GDPD2Q9HCC8 539 aa11.67□□□□□ -0.54
MS4A6A-210ENST00000529054 CEP126Q9P2H0 1117 aa11.67□□□□□ -0.54
MS4A6A-210ENST00000529054 STK17AQ9UEE5 414 aa11.67□□□□□ -0.54
MS4A6A-210ENST00000529054 ZNF592Q92610 1267 aa11.66□□□□□ -0.54
MS4A6A-210ENST00000529054 EIF4G1Q04637 1599 aaKnown RBP11.66□□□□□ -0.54
MS4A6A-210ENST00000529054 SENP3-EIF4A1A0A087X0R7 540 aa11.65□□□□□ -0.54
MS4A6A-210ENST00000529054 CCDC125Q86Z20 511 aa11.65□□□□□ -0.54
MS4A6A-210ENST00000529054 GPR161Q8N6U8 529 aaKnown RBP11.65□□□□□ -0.54
MS4A6A-210ENST00000529054 CCDC85AQ96PX6 553 aaPredicted RBP11.65□□□□□ -0.54
MS4A6A-210ENST00000529054 A0A1W2PRU2 124 aa11.64□□□□□ -0.55
MS4A6A-210ENST00000529054 MEN1O00255 615 aa11.64□□□□□ -0.55
MS4A6A-210ENST00000529054 ABL2P42684 1182 aa11.64□□□□□ -0.55
MS4A6A-210ENST00000529054 VAC14Q08AM6 782 aa11.64□□□□□ -0.55
MS4A6A-210ENST00000529054 CDCA7Q9BWT1 371 aaPredicted RBP11.64□□□□□ -0.55
MS4A6A-210ENST00000529054 RNF144AP50876 292 aaPredicted RBP11.63□□□□□ -0.55
MS4A6A-210ENST00000529054 FLIIQ13045 1269 aa11.63□□□□□ -0.55
MS4A6A-210ENST00000529054 TRIM52Q96A61 297 aa11.63□□□□□ -0.55
MS4A6A-210ENST00000529054 OSBPL3Q9H4L5 887 aa11.63□□□□□ -0.55
MS4A6A-210ENST00000529054 LYSMD3Q7Z3D4 306 aa11.62□□□□□ -0.55
MS4A6A-210ENST00000529054 PRICKLE2Q7Z3G6 844 aa11.62□□□□□ -0.55
MS4A6A-210ENST00000529054 ZSCAN1Q8NBB4 408 aa11.62□□□□□ -0.55
MS4A6A-210ENST00000529054 TRAK2O60296 914 aa11.61□□□□□ -0.55
MS4A6A-210ENST00000529054 ITGA6P23229 1130 aa11.61□□□□□ -0.55
MS4A6A-210ENST00000529054 TSGA10IPQ3SY00 556 aa11.61□□□□□ -0.55
MS4A6A-210ENST00000529054 RHOQP17081 205 aa11.6□□□□□ -0.55
MS4A6A-210ENST00000529054 EIF4G2P78344 907 aaKnown RBP eCLIP11.6□□□□□ -0.55
MS4A6A-210ENST00000529054 CYP2U1Q7Z449 544 aa11.6□□□□□ -0.55
MS4A6A-210ENST00000529054 SHROOM4Q9ULL8 1493 aa11.59□□□□□ -0.55
MS4A6A-210ENST00000529054 KRT76Q01546 638 aa11.59□□□□□ -0.55
MS4A6A-210ENST00000529054 NANOS1Q8WY41 292 aaKnown RBP11.59□□□□□ -0.55
MS4A6A-210ENST00000529054 ARHGEF10LQ9HCE6 1279 aa11.59□□□□□ -0.55
MS4A6A-210ENST00000529054 VWA5B2Q8N398 1253 aa11.58□□□□□ -0.56
MS4A6A-210ENST00000529054 PHTF2Q8N3S3 785 aa11.58□□□□□ -0.56
MS4A6A-210ENST00000529054 RAB6BQ9NRW1 208 aa11.58□□□□□ -0.56
MS4A6A-210ENST00000529054 CUX2O14529 1486 aa11.57□□□□□ -0.56
MS4A6A-210ENST00000529054 CDC14CA4D256 554 aa11.57□□□□□ -0.56
MS4A6A-210ENST00000529054 ESF1Q9H501 851 aaKnown RBP11.57□□□□□ -0.56
MS4A6A-210ENST00000529054 RAD21O60216 631 aa11.56□□□□□ -0.56
MS4A6A-210ENST00000529054 UBTFP17480 764 aaKnown RBP11.56□□□□□ -0.56
MS4A6A-210ENST00000529054 GPC1P35052 558 aa11.56□□□□□ -0.56
MS4A6A-210ENST00000529054 CLN3Q13286 438 aa11.56□□□□□ -0.56
MS4A6A-210ENST00000529054 NLRP3Q96P20 1036 aa11.56□□□□□ -0.56
MS4A6A-210ENST00000529054 CUEDC1Q9NWM3 386 aaPredicted RBP11.56□□□□□ -0.56
MS4A6A-210ENST00000529054 COG6Q9Y2V7 657 aa11.56□□□□□ -0.56
MS4A6A-210ENST00000529054 WASHC4Q2M389 1173 aa11.55□□□□□ -0.56
MS4A6A-210ENST00000529054 CNTNAP3BQ96NU0 1288 aa11.55□□□□□ -0.56
MS4A6A-210ENST00000529054 COL25A1Q9BXS0 654 aaPredicted RBP11.55□□□□□ -0.56
MS4A6A-210ENST00000529054 CNTNAP3Q9BZ76 1288 aa11.55□□□□□ -0.56
MS4A6A-210ENST00000529054 MYO15BQ96JP2 1530 aa11.55□□□□□ -0.56
MS4A6A-210ENST00000529054 POU4F2Q12837 409 aa11.54□□□□□ -0.56
MS4A6A-210ENST00000529054 SLFNL1Q499Z3 407 aa11.54□□□□□ -0.56
MS4A6A-210ENST00000529054 RNFT1Q5M7Z0 435 aa11.54□□□□□ -0.56
MS4A6A-210ENST00000529054 RNF135Q8IUD6 432 aa11.54□□□□□ -0.56
MS4A6A-210ENST00000529054 WWC1Q8IX03 1113 aa11.54□□□□□ -0.56
MS4A6A-210ENST00000529054 DOLKQ9UPQ8 538 aa11.54□□□□□ -0.56
MS4A6A-210ENST00000529054 MYCP01106 439 aaPredicted RBP11.53□□□□□ -0.56
MS4A6A-210ENST00000529054 IL2RAP01589 272 aa11.53□□□□□ -0.56
MS4A6A-210ENST00000529054 SLC27A3Q5K4L6 730 aa11.53□□□□□ -0.56
MS4A6A-210ENST00000529054 POM121Q96HA1 1249 aa11.53□□□□□ -0.56
MS4A6A-210ENST00000529054 GRIP2Q9C0E4 1043 aa11.53□□□□□ -0.56
MS4A6A-210ENST00000529054 GNRH1P01148 92 aa11.52□□□□□ -0.57
MS4A6A-210ENST00000529054 SV2AQ7L0J3 742 aa11.52□□□□□ -0.57
MS4A6A-210ENST00000529054 STAU1O95793 577 aaKnown RBP11.51□□□□□ -0.57
MS4A6A-210ENST00000529054 CNKSR1Q969H4 720 aa11.51□□□□□ -0.57
MS4A6A-210ENST00000529054 OXLD1Q5BKU9 147 aa11.5□□□□□ -0.57
MS4A6A-210ENST00000529054 CHIC2Q9UKJ5 165 aa11.5□□□□□ -0.57
MS4A6A-210ENST00000529054 FAM181BA6NEQ2 426 aa11.49□□□□□ -0.57
MS4A6A-210ENST00000529054 ESYT1Q9BSJ8 1104 aa11.49□□□□□ -0.57
MS4A6A-210ENST00000529054 CENPCQ03188 943 aa11.48□□□□□ -0.57
MS4A6A-210ENST00000529054 SEMA3FQ13275 785 aa11.48□□□□□ -0.57
MS4A6A-210ENST00000529054 NBPF10Q6P3W6 841 aaKnown RBP11.48□□□□□ -0.57
MS4A6A-210ENST00000529054 NBPF15Q8N660 670 aa11.48□□□□□ -0.57
MS4A6A-210ENST00000529054 HRH3Q9Y5N1 445 aa11.48□□□□□ -0.57
MS4A6A-210ENST00000529054 USP4Q13107 963 aa11.47□□□□□ -0.57
MS4A6A-210ENST00000529054 SPATA31C2B4DYI2 1134 aa11.46□□□□□ -0.57
MS4A6A-210ENST00000529054 PIK3CDO00329 1044 aa11.46□□□□□ -0.57
MS4A6A-210ENST00000529054 RIPOR1Q6ZS17 1223 aa11.46□□□□□ -0.57
MS4A6A-210ENST00000529054 PLPP7Q8NBV4 271 aa11.46□□□□□ -0.57
MS4A6A-210ENST00000529054 XAGE2Q96GT9 111 aa11.46□□□□□ -0.57
MS4A6A-210ENST00000529054 GAS2L1Q99501 681 aaPredicted RBP11.46□□□□□ -0.57
MS4A6A-210ENST00000529054 DYRK1BQ9Y463 629 aa11.46□□□□□ -0.57
MS4A6A-210ENST00000529054 SOX11P35716 441 aa11.45□□□□□ -0.58
MS4A6A-210ENST00000529054 ZNF837Q96EG3 531 aaPredicted RBP11.45□□□□□ -0.58
MS4A6A-210ENST00000529054 ETNK1Q9HBU6 452 aa11.45□□□□□ -0.58
MS4A6A-210ENST00000529054 WASLO00401 505 aaPredicted RBP11.44□□□□□ -0.58
MS4A6A-210ENST00000529054 DBN1Q16643 649 aa11.44□□□□□ -0.58
MS4A6A-210ENST00000529054 TAS1R3Q7RTX0 852 aa11.44□□□□□ -0.58
MS4A6A-210ENST00000529054 TRIM22Q8IYM9 498 aa11.44□□□□□ -0.58
MS4A6A-210ENST00000529054 FHDC1Q9C0D6 1143 aaPredicted RBP11.44□□□□□ -0.58
MS4A6A-210ENST00000529054 PHKA2P46019 1235 aa11.43□□□□□ -0.58
MS4A6A-210ENST00000529054 GAS6Q14393 721 aa11.43□□□□□ -0.58
MS4A6A-210ENST00000529054 TIMMDC1Q9NPL8 285 aa11.43□□□□□ -0.58
MS4A6A-210ENST00000529054 GPR25O00155 361 aa11.42□□□□□ -0.58
MS4A6A-210ENST00000529054 WHAMMQ8TF30 809 aa11.42□□□□□ -0.58
MS4A6A-210ENST00000529054 ZSCAN10Q96SZ4 725 aaPredicted RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms