RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 CEP126Q9P2H0 1117 aa9.5□□□□□ -0.89
CSDE1-212ENST00000529046 PTGIRP43119 386 aa9.49□□□□□ -0.89
CSDE1-212ENST00000529046 VEGFBP49765 207 aa9.49□□□□□ -0.89
CSDE1-212ENST00000529046 ERVK-9P63128 1117 aa9.49□□□□□ -0.89
CSDE1-212ENST00000529046 FIGNL2A6NMB9 653 aa9.48□□□□□ -0.89
CSDE1-212ENST00000529046 CTSOP43234 321 aaPredicted RBP9.48□□□□□ -0.89
CSDE1-212ENST00000529046 KDF1Q8NAX2 398 aaPredicted RBP9.48□□□□□ -0.89
CSDE1-212ENST00000529046 ATP5J2-PTCD1G3V325 749 aa9.47□□□□□ -0.89
CSDE1-212ENST00000529046 H3BM21 787 aa9.47□□□□□ -0.89
CSDE1-212ENST00000529046 ABCC9O60706 1549 aa9.46□□□□□ -0.89
CSDE1-212ENST00000529046 IRF7Q92985 503 aa9.46□□□□□ -0.9
CSDE1-212ENST00000529046 ESF1Q9H501 851 aaKnown RBP9.46□□□□□ -0.9
CSDE1-212ENST00000529046 SCTRP47872 440 aa9.45□□□□□ -0.9
CSDE1-212ENST00000529046 SLFNL1Q499Z3 407 aa9.45□□□□□ -0.9
CSDE1-212ENST00000529046 LCE2CQ5TA81 110 aa9.45□□□□□ -0.9
CSDE1-212ENST00000529046 CYP2U1Q7Z449 544 aa9.45□□□□□ -0.9
CSDE1-212ENST00000529046 WWC1Q8IX03 1113 aa9.45□□□□□ -0.9
CSDE1-212ENST00000529046 CCDC85AQ96PX6 553 aaPredicted RBP9.45□□□□□ -0.9
CSDE1-212ENST00000529046 SOX11P35716 441 aa9.44□□□□□ -0.9
CSDE1-212ENST00000529046 RNF217Q8TC41 542 aa9.44□□□□□ -0.9
CSDE1-212ENST00000529046 PTSQ03393 145 aa9.43□□□□□ -0.9
CSDE1-212ENST00000529046 SEMA3FQ13275 785 aa9.43□□□□□ -0.9
CSDE1-212ENST00000529046 FOXD4L5Q5VV16 416 aaPredicted RBP9.43□□□□□ -0.9
CSDE1-212ENST00000529046 RNF135Q8IUD6 432 aa9.43□□□□□ -0.9
CSDE1-212ENST00000529046 WIPF1O43516 503 aa9.42□□□□□ -0.9
CSDE1-212ENST00000529046 PPFIA3O75145 1194 aa9.42□□□□□ -0.9
CSDE1-212ENST00000529046 MYCP01106 439 aaPredicted RBP9.42□□□□□ -0.9
CSDE1-212ENST00000529046 CDCA7Q9BWT1 371 aaPredicted RBP9.42□□□□□ -0.9
CSDE1-212ENST00000529046 OSBPL3Q9H4L5 887 aa9.42□□□□□ -0.9
CSDE1-212ENST00000529046 DOLKQ9UPQ8 538 aa9.42□□□□□ -0.9
CSDE1-212ENST00000529046 A0A1W2PRU2 124 aa9.41□□□□□ -0.9
CSDE1-212ENST00000529046 MEN1O00255 615 aa9.41□□□□□ -0.9
CSDE1-212ENST00000529046 PHTF2Q8N3S3 785 aa9.41□□□□□ -0.9
CSDE1-212ENST00000529046 ERBB4Q15303 1308 aa9.4□□□□□ -0.9
CSDE1-212ENST00000529046 RNF144AP50876 292 aaPredicted RBP9.4□□□□□ -0.9
CSDE1-212ENST00000529046 C1orf115Q9H7X2 142 aa9.4□□□□□ -0.9
CSDE1-212ENST00000529046 POM121CA8CG34 1229 aa9.39□□□□□ -0.91
CSDE1-212ENST00000529046 LYSMD3Q7Z3D4 306 aa9.39□□□□□ -0.91
CSDE1-212ENST00000529046 ADAMTS19Q8TE59 1207 aa9.39□□□□□ -0.91
CSDE1-212ENST00000529046 NLRP3Q96P20 1036 aa9.39□□□□□ -0.91
CSDE1-212ENST00000529046 ARHGEF10LQ9HCE6 1279 aa9.39□□□□□ -0.91
CSDE1-212ENST00000529046 VSIG8P0DPA2 414 aa9.38□□□□□ -0.91
CSDE1-212ENST00000529046 GPC1P35052 558 aa9.38□□□□□ -0.91
CSDE1-212ENST00000529046 GMPRP36959 345 aa9.38□□□□□ -0.91
CSDE1-212ENST00000529046 CLN3Q13286 438 aa9.38□□□□□ -0.91
CSDE1-212ENST00000529046 TSGA10IPQ3SY00 556 aa9.38□□□□□ -0.91
CSDE1-212ENST00000529046 OXLD1Q5BKU9 147 aa9.38□□□□□ -0.91
CSDE1-212ENST00000529046 CCDC155Q8N6L0 562 aa9.38□□□□□ -0.91
CSDE1-212ENST00000529046 ALG2Q9H553 416 aa9.38□□□□□ -0.91
CSDE1-212ENST00000529046 SLC35F4A4IF30 521 aa9.37□□□□□ -0.91
CSDE1-212ENST00000529046 GNRH1P01148 92 aa9.37□□□□□ -0.91
CSDE1-212ENST00000529046 USP4Q13107 963 aa9.37□□□□□ -0.91
CSDE1-212ENST00000529046 RAB6BQ9NRW1 208 aa9.37□□□□□ -0.91
CSDE1-212ENST00000529046 CHIC2Q9UKJ5 165 aa9.37□□□□□ -0.91
CSDE1-212ENST00000529046 INSM1Q01101 510 aaPredicted RBP9.36□□□□□ -0.91
CSDE1-212ENST00000529046 MAP7D1Q3KQU3 841 aa9.36□□□□□ -0.91
CSDE1-212ENST00000529046 PRICKLE2Q7Z3G6 844 aa9.36□□□□□ -0.91
CSDE1-212ENST00000529046 PLPP7Q8NBV4 271 aa9.36□□□□□ -0.91
CSDE1-212ENST00000529046 SIRT1Q96EB6 747 aa9.36□□□□□ -0.91
CSDE1-212ENST00000529046 STK17AQ9UEE5 414 aa9.36□□□□□ -0.91
CSDE1-212ENST00000529046 SLC27A3Q5K4L6 730 aa9.35□□□□□ -0.91
CSDE1-212ENST00000529046 RHOQP17081 205 aa9.34□□□□□ -0.91
CSDE1-212ENST00000529046 SENP3-EIF4A1A0A087X0R7 540 aa9.33□□□□□ -0.92
CSDE1-212ENST00000529046 ITGA6P23229 1130 aa9.33□□□□□ -0.92
CSDE1-212ENST00000529046 CNKSR1Q969H4 720 aa9.33□□□□□ -0.92
CSDE1-212ENST00000529046 ESYT1Q9BSJ8 1104 aa9.33□□□□□ -0.92
CSDE1-212ENST00000529046 ZNF777Q9ULD5 760 aaPredicted RBP9.33□□□□□ -0.92
CSDE1-212ENST00000529046 PIK3CDO00329 1044 aa9.32□□□□□ -0.92
CSDE1-212ENST00000529046 IL2RAP01589 272 aa9.32□□□□□ -0.92
CSDE1-212ENST00000529046 ESCO1Q5FWF5 840 aa9.32□□□□□ -0.92
CSDE1-212ENST00000529046 GLMNQ92990 594 aa9.32□□□□□ -0.92
CSDE1-212ENST00000529046 GRIP2Q9C0E4 1043 aa9.32□□□□□ -0.92
CSDE1-212ENST00000529046 SUPT5HO00267 1087 aaKnown RBP9.31□□□□□ -0.92
CSDE1-212ENST00000529046 NANOS1Q8WY41 292 aaKnown RBP9.31□□□□□ -0.92
CSDE1-212ENST00000529046 ARID3CA6NKF2 412 aa9.3□□□□□ -0.92
CSDE1-212ENST00000529046 SKIP12755 728 aa9.3□□□□□ -0.92
CSDE1-212ENST00000529046 POU4F2Q12837 409 aa9.3□□□□□ -0.92
CSDE1-212ENST00000529046 HDGFL1Q5TGJ6 251 aa9.3□□□□□ -0.92
CSDE1-212ENST00000529046 CDC14CA4D256 554 aa9.29□□□□□ -0.92
CSDE1-212ENST00000529046 CENPCQ03188 943 aa9.29□□□□□ -0.92
CSDE1-212ENST00000529046 NFATC2IPQ8NCF5 419 aa9.29□□□□□ -0.92
CSDE1-212ENST00000529046 XAGE2Q96GT9 111 aa9.29□□□□□ -0.92
CSDE1-212ENST00000529046 UCN2Q96RP3 112 aa9.29□□□□□ -0.92
CSDE1-212ENST00000529046 SPATA31C2B4DYI2 1134 aa9.28□□□□□ -0.92
CSDE1-212ENST00000529046 EML3Q32P44 896 aa9.28□□□□□ -0.92
CSDE1-212ENST00000529046 NBPF10Q6P3W6 841 aaKnown RBP9.28□□□□□ -0.92
CSDE1-212ENST00000529046 SV2AQ7L0J3 742 aa9.28□□□□□ -0.92
CSDE1-212ENST00000529046 NBPF15Q8N660 670 aa9.28□□□□□ -0.92
CSDE1-212ENST00000529046 ETNK1Q9HBU6 452 aa9.28□□□□□ -0.92
CSDE1-212ENST00000529046 HRH3Q9Y5N1 445 aa9.28□□□□□ -0.92
CSDE1-212ENST00000529046 WASLO00401 505 aaPredicted RBP9.27□□□□□ -0.93
CSDE1-212ENST00000529046 STAU1O95793 577 aaKnown RBP9.27□□□□□ -0.93
CSDE1-212ENST00000529046 GTF2E1P29083 439 aaPredicted RBP9.27□□□□□ -0.93
CSDE1-212ENST00000529046 TAS1R3Q7RTX0 852 aa9.27□□□□□ -0.93
CSDE1-212ENST00000529046 VWA5B2Q8N398 1253 aa9.27□□□□□ -0.93
CSDE1-212ENST00000529046 GPR161Q8N6U8 529 aaKnown RBP9.27□□□□□ -0.93
CSDE1-212ENST00000529046 ZSCAN10Q96SZ4 725 aaPredicted RBP9.27□□□□□ -0.93
CSDE1-212ENST00000529046 LZTS3O60299 673 aaPredicted RBP9.26□□□□□ -0.93
CSDE1-212ENST00000529046 GDF10P55107 478 aa9.26□□□□□ -0.93
CSDE1-212ENST00000529046 WDR44Q5JSH3 913 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms