RNA–Protein interactions for RNA: ENST00000529008.5

SSR2-215, Transcript of signal sequence receptor subunit 2, human

TSL 5 BASIC

Gene SSR2, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSR2-215	ENST00000529008	PRIM1	P49642	420 aa	Known RBP	11.37	□□□□□ -0.59
SSR2-215	ENST00000529008	PUS7	Q96PZ0	661 aa	Known RBP	11.37	□□□□□ -0.59
SSR2-215	ENST00000529008	TFCP2L1	Q9NZI6	479 aa		11.37	□□□□□ -0.59
SSR2-215	ENST00000529008	ANKRD36B	Q8N2N9	1353 aa		11.37	□□□□□ -0.59
SSR2-215	ENST00000529008	BTAF1	O14981	1849 aa		11.37	□□□□□ -0.59
SSR2-215	ENST00000529008	PNPLA7	Q6ZV29	1317 aa		11.36	□□□□□ -0.59
SSR2-215	ENST00000529008	CENPB	P07199	599 aa	Predicted RBP	11.36	□□□□□ -0.59
SSR2-215	ENST00000529008	POLD1	P28340	1107 aa		11.36	□□□□□ -0.59
SSR2-215	ENST00000529008	PELP1	Q8IZL8	1130 aa	Known RBP	11.36	□□□□□ -0.59
SSR2-215	ENST00000529008	NSD2	O96028	1365 aa		11.36	□□□□□ -0.59
SSR2-215	ENST00000529008	RRS1	Q15050	365 aa	Known RBP	11.35	□□□□□ -0.59
SSR2-215	ENST00000529008	GPR162	Q16538	588 aa		11.35	□□□□□ -0.59
SSR2-215	ENST00000529008	USHBP1	Q8N6Y0	703 aa		11.35	□□□□□ -0.59
SSR2-215	ENST00000529008	CCNL1	Q9UK58	526 aa	Predicted RBP	11.35	□□□□□ -0.59
SSR2-215	ENST00000529008	RTL1	A6NKG5	1358 aa		11.35	□□□□□ -0.59
SSR2-215	ENST00000529008	ZCRB1	Q8TBF4	217 aa	Known RBP	11.34	□□□□□ -0.59
SSR2-215	ENST00000529008	GGNBP2	Q9H3C7	697 aa		11.34	□□□□□ -0.59
SSR2-215	ENST00000529008	SMG6	Q86US8	1419 aa	Known RBP	11.34	□□□□□ -0.59
SSR2-215	ENST00000529008	FAM208A	Q9UK61	1670 aa	Known RBP	11.33	□□□□□ -0.6
SSR2-215	ENST00000529008	USP47	Q96K76	1375 aa		11.33	□□□□□ -0.6
SSR2-215	ENST00000529008	MSH5	O43196	834 aa		11.33	□□□□□ -0.6
SSR2-215	ENST00000529008	SLC16A10	Q8TF71	515 aa		11.33	□□□□□ -0.6
SSR2-215	ENST00000529008	DOT1L	Q8TEK3	1739 aa		11.32	□□□□□ -0.6
SSR2-215	ENST00000529008	NBPF6	Q5VWK0	638 aa		11.32	□□□□□ -0.6
SSR2-215	ENST00000529008	NLGN2	Q8NFZ4	835 aa		11.32	□□□□□ -0.6
SSR2-215	ENST00000529008	RAPGEF4	Q8WZA2	1011 aa		11.32	□□□□□ -0.6
SSR2-215	ENST00000529008	NBPF4	Q96M43	638 aa		11.32	□□□□□ -0.6
SSR2-215	ENST00000529008	SENP3-EIF4A1	A0A087X0R7	540 aa		11.31	□□□□□ -0.6
SSR2-215	ENST00000529008	TMF1	P82094	1093 aa		11.31	□□□□□ -0.6
SSR2-215	ENST00000529008	MSL1	Q68DK7	614 aa		11.31	□□□□□ -0.6
SSR2-215	ENST00000529008	FYB1	O15117	783 aa		11.3	□□□□□ -0.6
SSR2-215	ENST00000529008	PCDH11X	Q9BZA7	1347 aa		11.3	□□□□□ -0.6
SSR2-215	ENST00000529008	PCDH11Y	Q9BZA8	1340 aa		11.3	□□□□□ -0.6
SSR2-215	ENST00000529008	SLC24A1	O60721	1099 aa		11.29	□□□□□ -0.6
SSR2-215	ENST00000529008	TAT	P17735	454 aa	Predicted RBP	11.29	□□□□□ -0.6
SSR2-215	ENST00000529008	C1QTNF8	P60827	252 aa		11.29	□□□□□ -0.6
SSR2-215	ENST00000529008	HSP90AB2P	Q58FF8	381 aa		11.29	□□□□□ -0.6
SSR2-215	ENST00000529008	COL23A1	Q86Y22	540 aa	Predicted RBP	11.29	□□□□□ -0.6
SSR2-215	ENST00000529008	CGNL1	Q0VF96	1302 aa		11.29	□□□□□ -0.6
SSR2-215	ENST00000529008	FLT4	P35916	1363 aa		11.28	□□□□□ -0.6
SSR2-215	ENST00000529008	PALLD	Q8WX93	1383 aa		11.28	□□□□□ -0.6
SSR2-215	ENST00000529008	SHANK3	Q9BYB0	1731 aa		11.28	□□□□□ -0.6
SSR2-215	ENST00000529008	INSR	P06213	1382 aa		11.28	□□□□□ -0.6
SSR2-215	ENST00000529008	GIGYF1	O75420	1035 aa	Predicted RBP	11.27	□□□□□ -0.61
SSR2-215	ENST00000529008	YBX3	P16989	372 aa	Known RBP eCLIP	11.27	□□□□□ -0.61	5e-9	■■□□□ 13.9
SSR2-215	ENST00000529008	MPRIP	Q6WCQ1	1025 aa		11.27	□□□□□ -0.61
SSR2-215	ENST00000529008	NSD3	Q9BZ95	1437 aa		11.26	□□□□□ -0.61
SSR2-215	ENST00000529008	EMILIN1	Q9Y6C2	1016 aa		11.26	□□□□□ -0.61
SSR2-215	ENST00000529008	QSER1	Q2KHR3	1735 aa		11.26	□□□□□ -0.61
SSR2-215	ENST00000529008	PPM1G	O15355	546 aa	Predicted RBP	11.25	□□□□□ -0.61
SSR2-215	ENST00000529008	CYP27B1	O15528	508 aa		11.25	□□□□□ -0.61
SSR2-215	ENST00000529008	PHF14	O94880	888 aa		11.25	□□□□□ -0.61
SSR2-215	ENST00000529008	CDCA8	Q53HL2	280 aa		11.25	□□□□□ -0.61
SSR2-215	ENST00000529008	LY75	O60449	1722 aa		11.25	□□□□□ -0.61
SSR2-215	ENST00000529008	TUBGCP6	Q96RT7	1819 aa		11.25	□□□□□ -0.61
SSR2-215	ENST00000529008	KIF24	Q5T7B8	1368 aa		11.25	□□□□□ -0.61
SSR2-215	ENST00000529008	AK7	Q96M32	723 aa		11.24	□□□□□ -0.61
SSR2-215	ENST00000529008	RGPD2	P0DJD1	1756 aa		11.23	□□□□□ -0.61
SSR2-215	ENST00000529008	GRIN3B	O60391	1043 aa		11.23	□□□□□ -0.61
SSR2-215	ENST00000529008	AMIGO3	Q86WK7	504 aa		11.23	□□□□□ -0.61
SSR2-215	ENST00000529008	CARD14	Q9BXL6	1004 aa		11.23	□□□□□ -0.61
SSR2-215	ENST00000529008	WWC3	Q9ULE0	1092 aa		11.23	□□□□□ -0.61
SSR2-215	ENST00000529008	COL24A1	Q17RW2	1714 aa		11.22	□□□□□ -0.61
SSR2-215	ENST00000529008	SMIM5	Q71RC9	77 aa		11.22	□□□□□ -0.61
SSR2-215	ENST00000529008	MIER1	Q8N108	512 aa		11.22	□□□□□ -0.61
SSR2-215	ENST00000529008	FLAD1	Q8NFF5	587 aa		11.22	□□□□□ -0.61
SSR2-215	ENST00000529008	PIGB	Q92521	554 aa		11.22	□□□□□ -0.61
SSR2-215	ENST00000529008	SMARCC1	Q92922	1105 aa	Predicted RBP	11.22	□□□□□ -0.61
SSR2-215	ENST00000529008	C5	P01031	1676 aa		11.21	□□□□□ -0.61
SSR2-215	ENST00000529008	ATP10D	Q9P241	1426 aa		11.21	□□□□□ -0.61
SSR2-215	ENST00000529008	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	11.21	□□□□□ -0.61
SSR2-215	ENST00000529008	CD2AP	Q9Y5K6	639 aa		11.21	□□□□□ -0.61
SSR2-215	ENST00000529008	TOGARAM1	Q9Y4F4	1720 aa		11.21	□□□□□ -0.62
SSR2-215	ENST00000529008	NCAPD2	Q15021	1401 aa		11.2	□□□□□ -0.62
SSR2-215	ENST00000529008	POLR3GL	Q9BT43	218 aa		11.2	□□□□□ -0.62
SSR2-215	ENST00000529008	SPG7	Q9UQ90	795 aa		11.2	□□□□□ -0.62
SSR2-215	ENST00000529008	KIF20B	Q96Q89	1820 aa		11.2	□□□□□ -0.62
SSR2-215	ENST00000529008	C4B	P0C0L5	1744 aa		11.19	□□□□□ -0.62
SSR2-215	ENST00000529008	LOC102724428	A0A0B4J2F2	783 aa		11.19	□□□□□ -0.62
SSR2-215	ENST00000529008	HMGB2	P26583	209 aa	Known RBP	11.19	□□□□□ -0.62
SSR2-215	ENST00000529008	SIK1	P57059	783 aa		11.19	□□□□□ -0.62
SSR2-215	ENST00000529008	LINC00116	Q8NCU8	138 aa		11.19	□□□□□ -0.62
SSR2-215	ENST00000529008	ZNF526	Q8TF50	670 aa	Predicted RBP	11.19	□□□□□ -0.62
SSR2-215	ENST00000529008	EYA1	Q99502	592 aa		11.19	□□□□□ -0.62
SSR2-215	ENST00000529008	TMOD3	Q9NYL9	352 aa		11.19	□□□□□ -0.62
SSR2-215	ENST00000529008	KAT6B	Q8WYB5	2073 aa		11.19	□□□□□ -0.62
SSR2-215	ENST00000529008	CEP350	Q5VT06	3117 aa		11.19	□□□□□ -0.62
SSR2-215	ENST00000529008	WASHC2A	Q641Q2	1341 aa		11.18	□□□□□ -0.62
SSR2-215	ENST00000529008	IGSF1	Q8N6C5	1336 aa		11.18	□□□□□ -0.62
SSR2-215	ENST00000529008	CHD4	Q14839	1912 aa		11.18	□□□□□ -0.62
SSR2-215	ENST00000529008	GNPAT	O15228	680 aa		11.18	□□□□□ -0.62
SSR2-215	ENST00000529008	SSFA2	P28290	1259 aa		11.18	□□□□□ -0.62
SSR2-215	ENST00000529008	TNNT2	P45379	298 aa	Predicted RBP	11.18	□□□□□ -0.62
SSR2-215	ENST00000529008	NKX1-1	Q15270	411 aa	Predicted RBP	11.18	□□□□□ -0.62
SSR2-215	ENST00000529008	PKD1L3	Q7Z443	1732 aa		11.18	□□□□□ -0.62
SSR2-215	ENST00000529008	ITPK1	Q13572	414 aa		11.17	□□□□□ -0.62
SSR2-215	ENST00000529008	GPBP1L1	Q9HC44	474 aa	Predicted RBP	11.17	□□□□□ -0.62
SSR2-215	ENST00000529008	ASAP1	Q9ULH1	1129 aa		11.17	□□□□□ -0.62
SSR2-215	ENST00000529008	ADCY9	O60503	1353 aa		11.16	□□□□□ -0.62
SSR2-215	ENST00000529008	PHKG2	P15735	406 aa		11.16	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms