RNA–Protein interactions for RNA: ENST00000528900.5

RDX-206, Transcript of radixin, humanhuman

TSL 1 (best) BASIC

Gene RDX, Length 1,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-206ENST00000528900 AAMPQ13685 434 aa35.71■■■■□ 3.31
RDX-206ENST00000528900 VAMP4O75379 141 aa35.7■■■■□ 3.31
RDX-206ENST00000528900 USHBP1Q8N6Y0 703 aa35.7■■■■□ 3.31
RDX-206ENST00000528900 ZC3H6P61129 1189 aaKnown RBP35.69■■■■□ 3.3
RDX-206ENST00000528900 KIF16BQ96L93 1317 aa35.69■■■■□ 3.3
RDX-206ENST00000528900 MAP3K5Q99683 1374 aa35.68■■■■□ 3.3
RDX-206ENST00000528900 HAP1P54257 671 aaPredicted RBP35.68■■■■□ 3.3
RDX-206ENST00000528900 LRRC37A3O60309 1634 aa35.67■■■■□ 3.3
RDX-206ENST00000528900 PANK1Q8TE04 598 aa35.67■■■■□ 3.3
RDX-206ENST00000528900 AXIN2Q9Y2T1 843 aa35.67■■■■□ 3.3
RDX-206ENST00000528900 CPDO75976 1380 aa35.67■■■■□ 3.3
RDX-206ENST00000528900 COL18A1P39060 1754 aa35.67■■■■□ 3.3
RDX-206ENST00000528900 RGPD5Q99666 1765 aa35.66■■■■□ 3.3
RDX-206ENST00000528900 IPO8O15397 1037 aaKnown RBP35.66■■■■□ 3.3
RDX-206ENST00000528900 TWISTNBQ3B726 338 aaPredicted RBP35.66■■■■□ 3.3
RDX-206ENST00000528900 LRRC59Q96AG4 307 aaKnown RBP35.66■■■■□ 3.3
RDX-206ENST00000528900 KIAA0232Q92628 1395 aa35.65■■■■□ 3.3
RDX-206ENST00000528900 NHSL1Q5SYE7 1610 aa35.65■■■■□ 3.3
RDX-206ENST00000528900 ERBB3P21860 1342 aa35.64■■■■□ 3.3
RDX-206ENST00000528900 LMO7Q8WWI1 1683 aa35.62■■■■□ 3.29
RDX-206ENST00000528900 TSPYL6Q8N831 410 aa35.62■■■■□ 3.29
RDX-206ENST00000528900 COG6Q9Y2V7 657 aa35.62■■■■□ 3.29
RDX-206ENST00000528900 AMOTQ4VCS5 1084 aa35.62■■■■□ 3.29
RDX-206ENST00000528900 DZIP1LQ8IYY4 767 aaKnown RBP35.62■■■■□ 3.29
RDX-206ENST00000528900 C8orf58Q8NAV2 365 aa35.62■■■■□ 3.29
RDX-206ENST00000528900 PLEKHO1Q53GL0 409 aaPredicted RBP35.61■■■■□ 3.29
RDX-206ENST00000528900 ATF7IPQ6VMQ6 1270 aa35.61■■■■□ 3.29
RDX-206ENST00000528900 CABLES1Q8TDN4 633 aa35.61■■■■□ 3.29
RDX-206ENST00000528900 FAM208AQ9UK61 1670 aaKnown RBP35.6■■■■□ 3.29
RDX-206ENST00000528900 FTSJ3Q8IY81 847 aaKnown RBP35.6■■■■□ 3.29
RDX-206ENST00000528900 TSHZ2Q9NRE2 1034 aa35.6■■■■□ 3.29
RDX-206ENST00000528900 BABAM1Q9NWV8 329 aa35.6■■■■□ 3.29
RDX-206ENST00000528900 NOB1Q9ULX3 412 aaKnown RBP35.6■■■■□ 3.29
RDX-206ENST00000528900 RLBP1P12271 317 aa35.58■■■■□ 3.29
RDX-206ENST00000528900 TRIM27P14373 513 aa35.56■■■■□ 3.28
RDX-206ENST00000528900 MRPL50Q8N5N7 158 aaKnown RBP35.56■■■■□ 3.28
RDX-206ENST00000528900 CLUAP1Q96AJ1 413 aa35.56■■■■□ 3.28
RDX-206ENST00000528900 ARHGAP45Q92619 1136 aa35.55■■■■□ 3.28
RDX-206ENST00000528900 TSPYL4Q9UJ04 414 aa35.55■■■■□ 3.28
RDX-206ENST00000528900 MVPQ14764 893 aaKnown RBP35.55■■■■□ 3.28
RDX-206ENST00000528900 CENPQQ7L2Z9 268 aaPredicted RBP35.55■■■■□ 3.28
RDX-206ENST00000528900 IL17REQ8NFR9 667 aa35.55■■■■□ 3.28
RDX-206ENST00000528900 TNNQ9UQP3 1299 aa35.55■■■■□ 3.28
RDX-206ENST00000528900 ELL2O00472 640 aaPredicted RBP35.54■■■■□ 3.28
RDX-206ENST00000528900 PLEKHG2Q9H7P9 1386 aa35.53■■■■□ 3.28
RDX-206ENST00000528900 KDM2BQ8NHM5 1336 aa35.53■■■■□ 3.28
RDX-206ENST00000528900 AKAP4Q5JQC9 854 aa35.53■■■■□ 3.28
RDX-206ENST00000528900 LTBP4Q8N2S1 1624 aa35.52■■■■□ 3.28
RDX-206ENST00000528900 CEMIPQ8WUJ3 1361 aa35.52■■■■□ 3.28
RDX-206ENST00000528900 TAF7Q15545 349 aaPredicted RBP35.5■■■■□ 3.27
RDX-206ENST00000528900 ABCA3Q99758 1704 aa35.49■■■■□ 3.27
RDX-206ENST00000528900 ZNF530Q6P9A1 599 aaPredicted RBP35.49■■■■□ 3.27
RDX-206ENST00000528900 NLRP2Q9NX02 1062 aa35.48■■■■□ 3.27
RDX-206ENST00000528900 CHRNA2Q15822 529 aa35.47■■■■□ 3.27
RDX-206ENST00000528900 DDX19BQ9UMR2 479 aa35.47■■■■□ 3.27
RDX-206ENST00000528900 SOS1Q07889 1333 aaPredicted RBP35.47■■■■□ 3.27
RDX-206ENST00000528900 OVOS2A0A0G2JMS6 1433 aa35.47■■■■□ 3.27
RDX-206ENST00000528900 C1orf141Q5JVX7 400 aa35.46■■■■□ 3.27
RDX-206ENST00000528900 CSB-PGBD3P0DP91 1061 aa35.45■■■■□ 3.27
RDX-206ENST00000528900 RAPGEF4Q8WZA2 1011 aa35.45■■■■□ 3.27
RDX-206ENST00000528900 MIS18AQ9NYP9 233 aa35.45■■■■□ 3.27
RDX-206ENST00000528900 PRDM11Q9NQV5 511 aa35.43■■■■□ 3.26
RDX-206ENST00000528900 KRT24Q2M2I5 525 aa35.42■■■■□ 3.26
RDX-206ENST00000528900 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP35.42■■■■□ 3.264e-7■■■□□ 17.5
RDX-206ENST00000528900 API5Q9BZZ5 524 aaKnown RBP35.41■■■■□ 3.26
RDX-206ENST00000528900 TATP17735 454 aaPredicted RBP35.41■■■■□ 3.26
RDX-206ENST00000528900 ROBO1Q9Y6N7 1651 aa35.4■■■■□ 3.26
RDX-206ENST00000528900 ITPRIPQ8IWB1 547 aa35.4■■■■□ 3.26
RDX-206ENST00000528900 AHDC1Q5TGY3 1603 aaPredicted RBP35.39■■■■□ 3.26
RDX-206ENST00000528900 TMEM57Q8N5G2 664 aa35.39■■■■□ 3.26
RDX-206ENST00000528900 CHMP4BQ9H444 224 aaKnown RBP35.38■■■■□ 3.25
RDX-206ENST00000528900 LGR6Q9HBX8 967 aa35.36■■■■□ 3.25
RDX-206ENST00000528900 SPG7Q9UQ90 795 aa35.36■■■■□ 3.25
RDX-206ENST00000528900 ADAMTS7Q9UKP4 1686 aa35.36■■■■□ 3.25
RDX-206ENST00000528900 TCERG1O14776 1098 aaKnown RBP35.36■■■■□ 3.25
RDX-206ENST00000528900 RNMTO43148 476 aaKnown RBP35.36■■■■□ 3.25
RDX-206ENST00000528900 TEFQ10587 303 aa35.36■■■■□ 3.25
RDX-206ENST00000528900 VIRMAQ69YN4 1812 aaKnown RBP35.36■■■■□ 3.25
RDX-206ENST00000528900 ABCC4O15439 1325 aa35.35■■■■□ 3.25
RDX-206ENST00000528900 WDR17Q8IZU2 1322 aa35.35■■■■□ 3.25
RDX-206ENST00000528900 KDM3BQ7LBC6 1761 aa35.34■■■■□ 3.25
RDX-206ENST00000528900 PTPRCP08575 1304 aa35.33■■■■□ 3.25
RDX-206ENST00000528900 MPRIPQ6WCQ1 1025 aa35.32■■■■□ 3.25
RDX-206ENST00000528900 MEGF6O75095 1541 aa35.32■■■■□ 3.24
RDX-206ENST00000528900 COL5A2P05997 1499 aaPredicted RBP35.32■■■■□ 3.24
RDX-206ENST00000528900 PCDHB15Q9Y5E8 787 aa35.32■■■■□ 3.24
RDX-206ENST00000528900 IGHDP01880 384 aa35.3■■■■□ 3.24
RDX-206ENST00000528900 PKD1L3Q7Z443 1732 aa35.3■■■■□ 3.24
RDX-206ENST00000528900 CHMP4AQ9BY43 222 aa35.29■■■■□ 3.24
RDX-206ENST00000528900 CCDC30Q5VVM6 783 aa35.29■■■■□ 3.24
RDX-206ENST00000528900 RWDD1Q9H446 243 aaPredicted RBP35.29■■■■□ 3.24
RDX-206ENST00000528900 ZBTB40Q9NUA8 1239 aa35.29■■■■□ 3.24
RDX-206ENST00000528900 CACNA1FO60840 1977 aa35.28■■■■□ 3.24
RDX-206ENST00000528900 COL22A1Q8NFW1 1626 aaPredicted RBP35.27■■■■□ 3.24
RDX-206ENST00000528900 HOXB7P09629 217 aa35.27■■■■□ 3.24
RDX-206ENST00000528900 STK31Q9BXU1 1019 aa35.27■■■■□ 3.24
RDX-206ENST00000528900 SLC4A2P04920 1241 aa35.26■■■■□ 3.24
RDX-206ENST00000528900 SIPA1L3O60292 1781 aaPredicted RBP35.26■■■■□ 3.23
RDX-206ENST00000528900 BTBD11A6QL63 1104 aa35.25■■■■□ 3.23
RDX-206ENST00000528900 PARP4Q9UKK3 1724 aaKnown RBP35.25■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms