RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 RUNDC1Q96C34 613 aa10.47□□□□□ -0.73
SSBP3-211ENST00000528787 NBPF4Q96M43 638 aa10.47□□□□□ -0.73
SSBP3-211ENST00000528787 USP35Q9P2H5 1018 aa10.47□□□□□ -0.73
SSBP3-211ENST00000528787 PCDH11XQ9BZA7 1347 aa10.47□□□□□ -0.73
SSBP3-211ENST00000528787 PCDH11YQ9BZA8 1340 aa10.47□□□□□ -0.73
SSBP3-211ENST00000528787 RGPD2P0DJD1 1756 aa10.47□□□□□ -0.73
SSBP3-211ENST00000528787 ONECUT3O60422 494 aaPredicted RBP10.46□□□□□ -0.73
SSBP3-211ENST00000528787 CALD1Q05682 793 aaKnown RBP10.46□□□□□ -0.73
SSBP3-211ENST00000528787 PDE3BQ13370 1112 aa10.46□□□□□ -0.73
SSBP3-211ENST00000528787 DDB1Q16531 1140 aa10.46□□□□□ -0.73
SSBP3-211ENST00000528787 PNISRQ8TF01 805 aaKnown RBP10.46□□□□□ -0.73
SSBP3-211ENST00000528787 OVOS2A0A0G2JMS6 1433 aa10.46□□□□□ -0.74
SSBP3-211ENST00000528787 HTATSF1O43719 755 aaKnown RBP10.45□□□□□ -0.74
SSBP3-211ENST00000528787 ZCRB1Q8TBF4 217 aaKnown RBP10.45□□□□□ -0.74
SSBP3-211ENST00000528787 PKD1L3Q7Z443 1732 aa10.44□□□□□ -0.74
SSBP3-211ENST00000528787 PRKAR2BP31323 418 aa10.44□□□□□ -0.74
SSBP3-211ENST00000528787 IFNL2Q8IZJ0 200 aa10.44□□□□□ -0.74
SSBP3-211ENST00000528787 FAM9BQ8IZU0 186 aa10.44□□□□□ -0.74
SSBP3-211ENST00000528787 RTF1Q92541 710 aaKnown RBP10.44□□□□□ -0.74
SSBP3-211ENST00000528787 RSPH6AQ9H0K4 717 aa10.44□□□□□ -0.74
SSBP3-211ENST00000528787 TNS2Q63HR2 1409 aa10.43□□□□□ -0.74
SSBP3-211ENST00000528787 HMOX1P09601 288 aa10.43□□□□□ -0.74
SSBP3-211ENST00000528787 AKAP4Q5JQC9 854 aa10.43□□□□□ -0.74
SSBP3-211ENST00000528787 ADAMTS8Q9UP79 889 aa10.43□□□□□ -0.74
SSBP3-211ENST00000528787 DISP2A7MBM2 1401 aa10.42□□□□□ -0.74
SSBP3-211ENST00000528787 THSD7AQ9UPZ6 1657 aa10.42□□□□□ -0.74
SSBP3-211ENST00000528787 FAM98CQ17RN3 349 aaKnown RBP10.42□□□□□ -0.74
SSBP3-211ENST00000528787 GLI3P10071 1580 aa10.42□□□□□ -0.74
SSBP3-211ENST00000528787 GNAT3A8MTJ3 354 aa10.41□□□□□ -0.74
SSBP3-211ENST00000528787 ZNF530Q6P9A1 599 aaPredicted RBP10.41□□□□□ -0.74
SSBP3-211ENST00000528787 DCAF5Q96JK2 942 aa10.41□□□□□ -0.74
SSBP3-211ENST00000528787 CHMP4AQ9BY43 222 aa10.41□□□□□ -0.74
SSBP3-211ENST00000528787 LRRC37A3O60309 1634 aa10.4□□□□□ -0.74
SSBP3-211ENST00000528787 NFE2L2Q16236 605 aa10.4□□□□□ -0.74
SSBP3-211ENST00000528787 SEPT12Q8IYM1 358 aa10.4□□□□□ -0.74
SSBP3-211ENST00000528787 USHBP1Q8N6Y0 703 aa10.4□□□□□ -0.74
SSBP3-211ENST00000528787 BCL9O00512 1426 aa10.4□□□□□ -0.75
SSBP3-211ENST00000528787 MAP3K5Q99683 1374 aa10.39□□□□□ -0.75
SSBP3-211ENST00000528787 MEGF6O75095 1541 aa10.39□□□□□ -0.75
SSBP3-211ENST00000528787 KAT6BQ8WYB5 2073 aa10.39□□□□□ -0.75
SSBP3-211ENST00000528787 CCDC27Q2M243 656 aa10.39□□□□□ -0.75
SSBP3-211ENST00000528787 FAM196AQ6ZSG2 479 aa10.39□□□□□ -0.75
SSBP3-211ENST00000528787 KRT27Q7Z3Y8 459 aa10.39□□□□□ -0.75
SSBP3-211ENST00000528787 AEBP1Q8IUX7 1158 aa10.39□□□□□ -0.75
SSBP3-211ENST00000528787 PLEKHF1Q96S99 279 aa10.39□□□□□ -0.75
SSBP3-211ENST00000528787 ERVV-2B6SEH9 535 aa10.38□□□□□ -0.75
SSBP3-211ENST00000528787 TMPOP42166 694 aaKnown RBP10.38□□□□□ -0.75
SSBP3-211ENST00000528787 RIPK4P57078 832 aa10.38□□□□□ -0.75
SSBP3-211ENST00000528787 NKX1-1Q15270 411 aaPredicted RBP10.38□□□□□ -0.75
SSBP3-211ENST00000528787 BABAM1Q9NWV8 329 aa10.38□□□□□ -0.75
SSBP3-211ENST00000528787 PHKG2P15735 406 aa10.37□□□□□ -0.75
SSBP3-211ENST00000528787 TEFQ10587 303 aa10.37□□□□□ -0.75
SSBP3-211ENST00000528787 MTHFSDQ2M296 383 aaKnown RBP10.37□□□□□ -0.75
SSBP3-211ENST00000528787 CCDC125Q86Z20 511 aa10.37□□□□□ -0.75
SSBP3-211ENST00000528787 DDX54Q8TDD1 881 aaKnown RBP10.37□□□□□ -0.75
SSBP3-211ENST00000528787 DLG5Q8TDM6 1919 aa10.37□□□□□ -0.75
SSBP3-211ENST00000528787 SCN11AQ9UI33 1791 aa10.37□□□□□ -0.75
SSBP3-211ENST00000528787 VIRMAQ69YN4 1812 aaKnown RBP10.36□□□□□ -0.75
SSBP3-211ENST00000528787 CCDC184Q52MB2 194 aa10.36□□□□□ -0.75
SSBP3-211ENST00000528787 RGS17Q9UGC6 210 aaPredicted RBP10.36□□□□□ -0.75
SSBP3-211ENST00000528787 APAF1O14727 1248 aa10.35□□□□□ -0.75
SSBP3-211ENST00000528787 SF3B2Q13435 895 aaKnown RBP10.35□□□□□ -0.75
SSBP3-211ENST00000528787 POTEAQ6S8J7 498 aa10.35□□□□□ -0.75
SSBP3-211ENST00000528787 WDR63Q8IWG1 891 aa10.35□□□□□ -0.75
SSBP3-211ENST00000528787 CCDC146Q8IYE0 955 aa10.35□□□□□ -0.75
SSBP3-211ENST00000528787 TMOD3Q9NYL9 352 aa10.35□□□□□ -0.75
SSBP3-211ENST00000528787 SHANK3Q9BYB0 1731 aa10.35□□□□□ -0.75
SSBP3-211ENST00000528787 BRWD3Q6RI45 1802 aa10.35□□□□□ -0.75
SSBP3-211ENST00000528787 IL16Q14005 1332 aa10.34□□□□□ -0.75
SSBP3-211ENST00000528787 CABP4P57796 275 aa10.34□□□□□ -0.75
SSBP3-211ENST00000528787 SMARCC1Q92922 1105 aaPredicted RBP10.34□□□□□ -0.75
SSBP3-211ENST00000528787 PHACTR3Q96KR7 559 aa10.34□□□□□ -0.75
SSBP3-211ENST00000528787 RGS12O14924 1447 aa10.33□□□□□ -0.76
SSBP3-211ENST00000528787 CYP27B1O15528 508 aa10.33□□□□□ -0.76
SSBP3-211ENST00000528787 GNAI1P63096 354 aa10.33□□□□□ -0.76
SSBP3-211ENST00000528787 MYH16Q9H6N6 1097 aa10.33□□□□□ -0.76
SSBP3-211ENST00000528787 ADAMTS7Q9UKP4 1686 aa10.33□□□□□ -0.76
SSBP3-211ENST00000528787 SOS1Q07889 1333 aaPredicted RBP10.33□□□□□ -0.76
SSBP3-211ENST00000528787 CEMIPQ8WUJ3 1361 aa10.32□□□□□ -0.76
SSBP3-211ENST00000528787 RNMTO43148 476 aaKnown RBP10.32□□□□□ -0.76
SSBP3-211ENST00000528787 HNRNPUQ00839 825 aaKnown RBP eCLIP10.32□□□□□ -0.76
SSBP3-211ENST00000528787 NEUROD2Q15784 382 aa10.32□□□□□ -0.76
SSBP3-211ENST00000528787 TTC5Q8N0Z6 440 aa10.32□□□□□ -0.76
SSBP3-211ENST00000528787 MARCH10Q8NA82 808 aaPredicted RBP10.32□□□□□ -0.76
SSBP3-211ENST00000528787 SLC52A2Q9HAB3 445 aa10.32□□□□□ -0.76
SSBP3-211ENST00000528787 ZBED9Q6R2W3 1325 aa10.32□□□□□ -0.76
SSBP3-211ENST00000528787 NHSQ6T4R5 1651 aa10.31□□□□□ -0.76
SSBP3-211ENST00000528787 MRC1P22897 1456 aa10.31□□□□□ -0.76
SSBP3-211ENST00000528787 ITGB4P16144 1822 aa10.31□□□□□ -0.76
SSBP3-211ENST00000528787 SBF2Q86WG5 1849 aa10.31□□□□□ -0.76
SSBP3-211ENST00000528787 DOT1LQ8TEK3 1739 aa10.31□□□□□ -0.76
SSBP3-211ENST00000528787 TAF7Q15545 349 aaPredicted RBP10.31□□□□□ -0.76
SSBP3-211ENST00000528787 BCL11BQ9C0K0 894 aaPredicted RBP10.31□□□□□ -0.76
SSBP3-211ENST00000528787 IFT57Q9NWB7 429 aa10.31□□□□□ -0.76
SSBP3-211ENST00000528787 E9PSI1 815 aa10.3□□□□□ -0.76
SSBP3-211ENST00000528787 GOLGA2Q08379 1002 aa10.3□□□□□ -0.76
SSBP3-211ENST00000528787 MPRIPQ6WCQ1 1025 aa10.3□□□□□ -0.76
SSBP3-211ENST00000528787 WWC1Q8IX03 1113 aa10.3□□□□□ -0.76
SSBP3-211ENST00000528787 SYTL4Q96C24 671 aaPredicted RBP10.3□□□□□ -0.76
SSBP3-211ENST00000528787 CFAP44Q96MT7 982 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms