RNA–Protein interactions for RNA: ENST00000528653.1

EIF3F-202, Transcript of eukaryotic translation initiation factor 3 subunit F, humanhuman

TSL 2

Gene EIF3F, Length 739 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3F-202ENST00000528653 PKD1L3Q7Z443 1732 aa18.25■□□□□ 0.51
EIF3F-202ENST00000528653 TNS2Q63HR2 1409 aa18.24■□□□□ 0.51
EIF3F-202ENST00000528653 CCER2I3L3R5 266 aa18.24■□□□□ 0.51
EIF3F-202ENST00000528653 TATP17735 454 aaPredicted RBP18.24■□□□□ 0.51
EIF3F-202ENST00000528653 SHANK3Q9BYB0 1731 aa18.23■□□□□ 0.51
EIF3F-202ENST00000528653 BRWD3Q6RI45 1802 aa18.23■□□□□ 0.51
EIF3F-202ENST00000528653 CDCA7Q9BWT1 371 aaPredicted RBP18.23■□□□□ 0.51
EIF3F-202ENST00000528653 SEPT12Q8IYM1 358 aa18.22■□□□□ 0.51
EIF3F-202ENST00000528653 RSPH6AQ9H0K4 717 aa18.22■□□□□ 0.51
EIF3F-202ENST00000528653 ONECUT3O60422 494 aaPredicted RBP18.21■□□□□ 0.51
EIF3F-202ENST00000528653 PRKAR2BP31323 418 aa18.21■□□□□ 0.51
EIF3F-202ENST00000528653 PNISRQ8TF01 805 aaKnown RBP18.2■□□□□ 0.5
EIF3F-202ENST00000528653 FCHSD2O94868 740 aa18.19■□□□□ 0.5
EIF3F-202ENST00000528653 DDB1Q16531 1140 aa18.19■□□□□ 0.5
EIF3F-202ENST00000528653 PLEKHG2Q9H7P9 1386 aa18.18■□□□□ 0.5
EIF3F-202ENST00000528653 ADAMTS8Q9UP79 889 aa18.18■□□□□ 0.5
EIF3F-202ENST00000528653 ZCRB1Q8TBF4 217 aaKnown RBP18.17■□□□□ 0.5
EIF3F-202ENST00000528653 EXOC5O00471 708 aa18.16■□□□□ 0.5
EIF3F-202ENST00000528653 CCDC146Q8IYE0 955 aa18.16■□□□□ 0.5
EIF3F-202ENST00000528653 FAM9BQ8IZU0 186 aa18.16■□□□□ 0.5
EIF3F-202ENST00000528653 SPG7Q9UQ90 795 aa18.16■□□□□ 0.5
EIF3F-202ENST00000528653 PLEKHO1Q53GL0 409 aaPredicted RBP18.15■□□□□ 0.5
EIF3F-202ENST00000528653 PCDH11XQ9BZA7 1347 aa18.15■□□□□ 0.5
EIF3F-202ENST00000528653 PCDH11YQ9BZA8 1340 aa18.15■□□□□ 0.5
EIF3F-202ENST00000528653 MAPK8IP3Q9UPT6 1336 aa18.15■□□□□ 0.5
EIF3F-202ENST00000528653 PDE3BQ13370 1112 aa18.14■□□□□ 0.49
EIF3F-202ENST00000528653 AMOTQ4VCS5 1084 aa18.14■□□□□ 0.49
EIF3F-202ENST00000528653 ZNF530Q6P9A1 599 aaPredicted RBP18.14■□□□□ 0.49
EIF3F-202ENST00000528653 DDX54Q8TDD1 881 aaKnown RBP18.14■□□□□ 0.49
EIF3F-202ENST00000528653 PHACTR3Q96KR7 559 aa18.14■□□□□ 0.49
EIF3F-202ENST00000528653 PLEKHF1Q96S99 279 aa18.14■□□□□ 0.49
EIF3F-202ENST00000528653 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.14■□□□□ 0.49
EIF3F-202ENST00000528653 EP400Q96L91 3159 aa18.14■□□□□ 0.49
EIF3F-202ENST00000528653 NEFMP07197 916 aa18.13■□□□□ 0.49
EIF3F-202ENST00000528653 MTHFSDQ2M296 383 aaKnown RBP18.13■□□□□ 0.49
EIF3F-202ENST00000528653 KRT27Q7Z3Y8 459 aa18.13■□□□□ 0.49
EIF3F-202ENST00000528653 PNNQ9H307 717 aaKnown RBP18.13■□□□□ 0.49
EIF3F-202ENST00000528653 CYP27B1O15528 508 aa18.12■□□□□ 0.49
EIF3F-202ENST00000528653 MARCH10Q8NA82 808 aaPredicted RBP18.12■□□□□ 0.49
EIF3F-202ENST00000528653 FAM182BQ5T319 152 aa18.11■□□□□ 0.49
EIF3F-202ENST00000528653 GAS2L2Q8NHY3 880 aa18.11■□□□□ 0.49
EIF3F-202ENST00000528653 RUNDC1Q96C34 613 aa18.11■□□□□ 0.49
EIF3F-202ENST00000528653 DOT1LQ8TEK3 1739 aa18.11■□□□□ 0.49
EIF3F-202ENST00000528653 DLG5Q8TDM6 1919 aa18.11■□□□□ 0.49
EIF3F-202ENST00000528653 TOGARAM1Q9Y4F4 1720 aa18.1■□□□□ 0.49
EIF3F-202ENST00000528653 PHKG2P15735 406 aa18.1■□□□□ 0.49
EIF3F-202ENST00000528653 C1orf141Q5JVX7 400 aa18.1■□□□□ 0.49
EIF3F-202ENST00000528653 MAP3K5Q99683 1374 aa18.09■□□□□ 0.49
EIF3F-202ENST00000528653 IFNL2Q8IZJ0 200 aa18.09■□□□□ 0.49
EIF3F-202ENST00000528653 VIRMAQ69YN4 1812 aaKnown RBP18.09■□□□□ 0.49
EIF3F-202ENST00000528653 KDM6AO15550 1401 aaPredicted RBP18.07■□□□□ 0.48
EIF3F-202ENST00000528653 NFE2L2Q16236 605 aa18.07■□□□□ 0.48
EIF3F-202ENST00000528653 AKAP4Q5JQC9 854 aa18.07■□□□□ 0.48
EIF3F-202ENST00000528653 RRP7AQ9Y3A4 280 aaKnown RBP18.07■□□□□ 0.48
EIF3F-202ENST00000528653 KAT6BQ8WYB5 2073 aa18.07■□□□□ 0.48
EIF3F-202ENST00000528653 SENP3-EIF4A1A0A087X0R7 540 aa18.06■□□□□ 0.48
EIF3F-202ENST00000528653 APAF1O14727 1248 aa18.06■□□□□ 0.48
EIF3F-202ENST00000528653 SBF2Q86WG5 1849 aa18.06■□□□□ 0.48
EIF3F-202ENST00000528653 SCN11AQ9UI33 1791 aa18.06■□□□□ 0.48
EIF3F-202ENST00000528653 NHSQ6T4R5 1651 aa18.06■□□□□ 0.48
EIF3F-202ENST00000528653 ADAMTS7Q9UKP4 1686 aa18.06■□□□□ 0.48
EIF3F-202ENST00000528653 BCL9O00512 1426 aa18.05■□□□□ 0.48
EIF3F-202ENST00000528653 HSP90AB1P08238 724 aaKnown RBP18.04■□□□□ 0.48
EIF3F-202ENST00000528653 TMPOP42166 694 aaKnown RBP18.04■□□□□ 0.48
EIF3F-202ENST00000528653 MPRIPQ6WCQ1 1025 aa18.04■□□□□ 0.48
EIF3F-202ENST00000528653 GNAT3A8MTJ3 354 aa18.03■□□□□ 0.48
EIF3F-202ENST00000528653 NKX1-1Q15270 411 aaPredicted RBP18.03■□□□□ 0.48
EIF3F-202ENST00000528653 NEUROD2Q15784 382 aa18.03■□□□□ 0.48
EIF3F-202ENST00000528653 SRCAPQ6ZRS2 3230 aa18.03■□□□□ 0.48
EIF3F-202ENST00000528653 ITGB4P16144 1822 aa18.02■□□□□ 0.48
EIF3F-202ENST00000528653 RIPK4P57078 832 aa18.02■□□□□ 0.48
EIF3F-202ENST00000528653 FAM196AQ6ZSG2 479 aa18.02■□□□□ 0.48
EIF3F-202ENST00000528653 ACSBG1Q96GR2 724 aa18.02■□□□□ 0.48
EIF3F-202ENST00000528653 DCAF5Q96JK2 942 aa18.02■□□□□ 0.48
EIF3F-202ENST00000528653 MRC1P22897 1456 aa18.01■□□□□ 0.47
EIF3F-202ENST00000528653 RTF1Q92541 710 aaKnown RBP18.01■□□□□ 0.47
EIF3F-202ENST00000528653 RNMTO43148 476 aaKnown RBP18■□□□□ 0.47
EIF3F-202ENST00000528653 DCTN1Q14203 1278 aa18■□□□□ 0.47
EIF3F-202ENST00000528653 MCM10Q7L590 875 aa18■□□□□ 0.47
EIF3F-202ENST00000528653 LGR6Q9HBX8 967 aa18■□□□□ 0.47
EIF3F-202ENST00000528653 TNS1Q9HBL0 1735 aaKnown RBP18■□□□□ 0.47
EIF3F-202ENST00000528653 IL17REQ8NFR9 667 aa17.99■□□□□ 0.47
EIF3F-202ENST00000528653 SYTL4Q96C24 671 aaPredicted RBP17.99■□□□□ 0.47
EIF3F-202ENST00000528653 BTAF1O14981 1849 aa17.99■□□□□ 0.47
EIF3F-202ENST00000528653 SIPA1L3O60292 1781 aaPredicted RBP17.99■□□□□ 0.47
EIF3F-202ENST00000528653 KCNQ2O43526 872 aa17.98■□□□□ 0.47
EIF3F-202ENST00000528653 HTATSF1O43719 755 aaKnown RBP17.98■□□□□ 0.47
EIF3F-202ENST00000528653 PRIM1P49642 420 aaKnown RBP17.98■□□□□ 0.47
EIF3F-202ENST00000528653 LMOD3Q0VAK6 560 aa17.98■□□□□ 0.47
EIF3F-202ENST00000528653 THUMPD2Q9BTF0 503 aaKnown RBP17.98■□□□□ 0.47
EIF3F-202ENST00000528653 CEMIPQ8WUJ3 1361 aa17.98■□□□□ 0.47
EIF3F-202ENST00000528653 TRIM37O94972 964 aa17.97■□□□□ 0.47
EIF3F-202ENST00000528653 PTF1AQ7RTS3 328 aa17.97■□□□□ 0.47
EIF3F-202ENST00000528653 SALL2Q9Y467 1007 aaPredicted RBP17.97■□□□□ 0.47
EIF3F-202ENST00000528653 ERVV-2B6SEH9 535 aa17.96■□□□□ 0.47
EIF3F-202ENST00000528653 CABP4P57796 275 aa17.96■□□□□ 0.47
EIF3F-202ENST00000528653 TMOD3Q9NYL9 352 aa17.96■□□□□ 0.47
EIF3F-202ENST00000528653 TRIM35Q9UPQ4 493 aa17.96■□□□□ 0.47
EIF3F-202ENST00000528653 TEFQ10587 303 aa17.95■□□□□ 0.46
EIF3F-202ENST00000528653 SLC52A2Q9HAB3 445 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms