RNA–Protein interactions for RNA: ENST00000527921.1

CHD7-207, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 4

Gene CHD7, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-207ENST00000527921 GOLGB1Q14789 3259 aaKnown RBP16.86■□□□□ 0.29
CHD7-207ENST00000527921 LY75O60449 1722 aa16.85■□□□□ 0.29
CHD7-207ENST00000527921 QSER1Q2KHR3 1735 aa16.85■□□□□ 0.29
CHD7-207ENST00000527921 CARD14Q9BXL6 1004 aa16.85■□□□□ 0.29
CHD7-207ENST00000527921 YY1P25490 414 aa16.84■□□□□ 0.29
CHD7-207ENST00000527921 PRIM1P49642 420 aaKnown RBP16.84■□□□□ 0.29
CHD7-207ENST00000527921 ZCRB1Q8TBF4 217 aaKnown RBP16.84■□□□□ 0.29
CHD7-207ENST00000527921 COL24A1Q17RW2 1714 aa16.84■□□□□ 0.29
CHD7-207ENST00000527921 SLC27A3Q5K4L6 730 aa16.83■□□□□ 0.28
CHD7-207ENST00000527921 FHDC1Q9C0D6 1143 aaPredicted RBP16.83■□□□□ 0.28
CHD7-207ENST00000527921 TUBGCP6Q96RT7 1819 aa16.82■□□□□ 0.28
CHD7-207ENST00000527921 INSRP06213 1382 aa16.82■□□□□ 0.28
CHD7-207ENST00000527921 HSP90AB2PQ58FF8 381 aa16.82■□□□□ 0.28
CHD7-207ENST00000527921 USHBP1Q8N6Y0 703 aa16.82■□□□□ 0.28
CHD7-207ENST00000527921 SYT17Q9BSW7 474 aa16.82■□□□□ 0.28
CHD7-207ENST00000527921 KIF24Q5T7B8 1368 aa16.81■□□□□ 0.28
CHD7-207ENST00000527921 KCNQ4P56696 695 aa16.81■□□□□ 0.28
CHD7-207ENST00000527921 CDCA8Q53HL2 280 aa16.81■□□□□ 0.28
CHD7-207ENST00000527921 FLT4P35916 1363 aa16.8■□□□□ 0.28
CHD7-207ENST00000527921 CGNL1Q0VF96 1302 aa16.8■□□□□ 0.28
CHD7-207ENST00000527921 TIMELESSQ9UNS1 1208 aa16.8■□□□□ 0.28
CHD7-207ENST00000527921 NSD3Q9BZ95 1437 aa16.79■□□□□ 0.28
CHD7-207ENST00000527921 ANKRD26Q9UPS8 1709 aa16.79■□□□□ 0.28
CHD7-207ENST00000527921 MAP3K5Q99683 1374 aa16.79■□□□□ 0.28
CHD7-207ENST00000527921 PNPLA7Q6ZV29 1317 aa16.79■□□□□ 0.28
CHD7-207ENST00000527921 SYTL4Q96C24 671 aaPredicted RBP16.79■□□□□ 0.28
CHD7-207ENST00000527921 NCAPD2Q15021 1401 aa16.79■□□□□ 0.28
CHD7-207ENST00000527921 SMG6Q86US8 1419 aaKnown RBP16.79■□□□□ 0.28
CHD7-207ENST00000527921 ARXQ96QS3 562 aa16.78■□□□□ 0.28
CHD7-207ENST00000527921 EMILIN1Q9Y6C2 1016 aa16.77■□□□□ 0.28
CHD7-207ENST00000527921 CLSPNQ9HAW4 1339 aa16.76■□□□□ 0.27
CHD7-207ENST00000527921 DCAF8L1A6NGE4 600 aa16.76■□□□□ 0.27
CHD7-207ENST00000527921 SLC16A10Q8TF71 515 aa16.76■□□□□ 0.27
CHD7-207ENST00000527921 RAPGEF4Q8WZA2 1011 aa16.76■□□□□ 0.27
CHD7-207ENST00000527921 PKD1L3Q7Z443 1732 aa16.76■□□□□ 0.27
CHD7-207ENST00000527921 TOGARAM1Q9Y4F4 1720 aa16.76■□□□□ 0.27
CHD7-207ENST00000527921 CYP27B1O15528 508 aa16.74■□□□□ 0.27
CHD7-207ENST00000527921 TATP17735 454 aaPredicted RBP16.74■□□□□ 0.27
CHD7-207ENST00000527921 PCDH11XQ9BZA7 1347 aa16.73■□□□□ 0.27
CHD7-207ENST00000527921 PCDH11YQ9BZA8 1340 aa16.73■□□□□ 0.27
CHD7-207ENST00000527921 TFCP2L1Q9NZI6 479 aa16.73■□□□□ 0.27
CHD7-207ENST00000527921 CCNL1Q9UK58 526 aaPredicted RBP16.73■□□□□ 0.27
CHD7-207ENST00000527921 MAP2P11137 1827 aaKnown RBP16.72■□□□□ 0.27
CHD7-207ENST00000527921 C5P01031 1676 aa16.72■□□□□ 0.27
CHD7-207ENST00000527921 WASHC2AQ641Q2 1341 aa16.71■□□□□ 0.27
CHD7-207ENST00000527921 ITGB4P16144 1822 aa16.71■□□□□ 0.27
CHD7-207ENST00000527921 TAF1LQ8IZX4 1826 aa16.71■□□□□ 0.27
CHD7-207ENST00000527921 NKX1-1Q15270 411 aaPredicted RBP16.7■□□□□ 0.26
CHD7-207ENST00000527921 COL23A1Q86Y22 540 aaPredicted RBP16.7■□□□□ 0.26
CHD7-207ENST00000527921 POLKQ9UBT6 870 aa16.7■□□□□ 0.26
CHD7-207ENST00000527921 CHD4Q14839 1912 aa16.69■□□□□ 0.26
CHD7-207ENST00000527921 EYA1Q99502 592 aa16.69■□□□□ 0.26
CHD7-207ENST00000527921 PALLDQ8WX93 1383 aa16.68■□□□□ 0.26
CHD7-207ENST00000527921 ZNF784Q8NCA9 323 aaPredicted RBP16.68■□□□□ 0.26
CHD7-207ENST00000527921 PPM1GO15355 546 aaPredicted RBP16.67■□□□□ 0.26
CHD7-207ENST00000527921 POLD1P28340 1107 aa16.67■□□□□ 0.26
CHD7-207ENST00000527921 MPRIPQ6WCQ1 1025 aa16.67■□□□□ 0.26
CHD7-207ENST00000527921 PCGF6Q9BYE7 350 aa16.67■□□□□ 0.26
CHD7-207ENST00000527921 NLGN2Q8NFZ4 835 aa16.66■□□□□ 0.26
CHD7-207ENST00000527921 PIGBQ92521 554 aa16.66■□□□□ 0.26
CHD7-207ENST00000527921 C4BP0C0L5 1744 aa16.65■□□□□ 0.26
CHD7-207ENST00000527921 AMIGO3Q86WK7 504 aa16.65■□□□□ 0.26
CHD7-207ENST00000527921 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.65■□□□□ 0.262e-8■■■□□ 16.4
CHD7-207ENST00000527921 HSPA5P11021 654 aaKnown RBP16.63■□□□□ 0.25
CHD7-207ENST00000527921 EIF4A2Q14240 407 aaKnown RBP16.63■□□□□ 0.25
CHD7-207ENST00000527921 SPG7Q9UQ90 795 aa16.63■□□□□ 0.25
CHD7-207ENST00000527921 UBR3Q6ZT12 1888 aa16.63■□□□□ 0.25
CHD7-207ENST00000527921 SMARCC1Q92922 1105 aaPredicted RBP16.62■□□□□ 0.25
CHD7-207ENST00000527921 PLEKHG2Q9H7P9 1386 aa16.62■□□□□ 0.25
CHD7-207ENST00000527921 MSH5O43196 834 aa16.61■□□□□ 0.25
CHD7-207ENST00000527921 PHKG2P15735 406 aa16.61■□□□□ 0.25
CHD7-207ENST00000527921 EIF4G2P78344 907 aaKnown RBP eCLIP16.61■□□□□ 0.25
CHD7-207ENST00000527921 GPR162Q16538 588 aa16.61■□□□□ 0.25
CHD7-207ENST00000527921 MSL1Q68DK7 614 aa16.61■□□□□ 0.25
CHD7-207ENST00000527921 KLHL34Q8N239 644 aa16.61■□□□□ 0.25
CHD7-207ENST00000527921 IGSF1Q8N6C5 1336 aa16.61■□□□□ 0.25
CHD7-207ENST00000527921 TNNT2P45379 298 aaPredicted RBP16.6■□□□□ 0.25
CHD7-207ENST00000527921 PANK3Q9H999 370 aa16.6■□□□□ 0.25
CHD7-207ENST00000527921 LOC102724428A0A0B4J2F2 783 aa16.59■□□□□ 0.25
CHD7-207ENST00000527921 YBX3P16989 372 aaKnown RBP eCLIP16.59■□□□□ 0.25
CHD7-207ENST00000527921 HMGB2P26583 209 aaKnown RBP16.59■□□□□ 0.25
CHD7-207ENST00000527921 SIK1P57059 783 aa16.59■□□□□ 0.25
CHD7-207ENST00000527921 SMIM5Q71RC9 77 aa16.59■□□□□ 0.25
CHD7-207ENST00000527921 IFNL2Q8IZJ0 200 aa16.59■□□□□ 0.25
CHD7-207ENST00000527921 LINC00116Q8NCU8 138 aa16.59■□□□□ 0.25
CHD7-207ENST00000527921 FLAD1Q8NFF5 587 aa16.59■□□□□ 0.25
CHD7-207ENST00000527921 POLR3GLQ9BT43 218 aa16.59■□□□□ 0.25
CHD7-207ENST00000527921 ASAP1Q9ULH1 1129 aa16.59■□□□□ 0.25
CHD7-207ENST00000527921 ITPK1Q13572 414 aa16.58■□□□□ 0.24
CHD7-207ENST00000527921 ATG3Q9NT62 314 aa16.57■□□□□ 0.24
CHD7-207ENST00000527921 TMOD3Q9NYL9 352 aa16.57■□□□□ 0.24
CHD7-207ENST00000527921 AK7Q96M32 723 aa16.56■□□□□ 0.24
CHD7-207ENST00000527921 CD2APQ9Y5K6 639 aa16.56■□□□□ 0.24
CHD7-207ENST00000527921 KDRP35968 1356 aa16.55■□□□□ 0.24
CHD7-207ENST00000527921 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.55■□□□□ 0.24
CHD7-207ENST00000527921 SSFA2P28290 1259 aa16.55■□□□□ 0.24
CHD7-207ENST00000527921 ZNF831Q5JPB2 1677 aa16.55■□□□□ 0.24
CHD7-207ENST00000527921 PELP1Q8IZL8 1130 aaKnown RBP16.54■□□□□ 0.24
CHD7-207ENST00000527921 SLC4A9Q96Q91 983 aa16.54■□□□□ 0.24
CHD7-207ENST00000527921 KDM6AO15550 1401 aaPredicted RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms