RNA–Protein interactions for RNA: ENST00000527409.1

LMNB2-204, Transcript of lamin B2, humanhuman

TSL 5

Gene LMNB2, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-204ENST00000527409 ZCRB1Q8TBF4 217 aaKnown RBP30.75■■■□□ 2.51
LMNB2-204ENST00000527409 TATP17735 454 aaPredicted RBP30.73■■■□□ 2.51
LMNB2-204ENST00000527409 PTF1AQ7RTS3 328 aa30.73■■■□□ 2.51
LMNB2-204ENST00000527409 DDX54Q8TDD1 881 aaKnown RBP30.73■■■□□ 2.51
LMNB2-204ENST00000527409 KAT6BQ8WYB5 2073 aa30.73■■■□□ 2.51
LMNB2-204ENST00000527409 PER1O15534 1290 aaPredicted RBP30.72■■■□□ 2.51
LMNB2-204ENST00000527409 BTAF1O14981 1849 aa30.69■■■□□ 2.5
LMNB2-204ENST00000527409 KCNQ2O43526 872 aa30.69■■■□□ 2.5
LMNB2-204ENST00000527409 ACSBG1Q96GR2 724 aa30.69■■■□□ 2.5
LMNB2-204ENST00000527409 PKD1L3Q7Z443 1732 aa30.68■■■□□ 2.5
LMNB2-204ENST00000527409 DOT1LQ8TEK3 1739 aa30.67■■■□□ 2.5
LMNB2-204ENST00000527409 EIF4A2Q14240 407 aaKnown RBP30.67■■■□□ 2.5
LMNB2-204ENST00000527409 EYA1Q99502 592 aa30.67■■■□□ 2.5
LMNB2-204ENST00000527409 NPC1L1Q9UHC9 1359 aa30.66■■■□□ 2.5
LMNB2-204ENST00000527409 PSDA5PKW4 1024 aaPredicted RBP30.65■■■□□ 2.5
LMNB2-204ENST00000527409 PCDH11XQ9BZA7 1347 aa30.65■■■□□ 2.5
LMNB2-204ENST00000527409 PCDH11YQ9BZA8 1340 aa30.65■■■□□ 2.5
LMNB2-204ENST00000527409 NBPF14Q5TI25 921 aa30.64■■■□□ 2.5
LMNB2-204ENST00000527409 R3HDM1Q15032 1099 aaKnown RBP30.63■■■□□ 2.49
LMNB2-204ENST00000527409 SRCAPQ6ZRS2 3230 aa30.63■■■□□ 2.49
LMNB2-204ENST00000527409 PLEKHG2Q9H7P9 1386 aa30.61■■■□□ 2.49
LMNB2-204ENST00000527409 CC2D1BQ5T0F9 858 aaKnown RBP30.6■■■□□ 2.49
LMNB2-204ENST00000527409 IGSF1Q8N6C5 1336 aa30.6■■■□□ 2.49
LMNB2-204ENST00000527409 TXNRD1Q16881 649 aa30.58■■■□□ 2.49
LMNB2-204ENST00000527409 PROM2Q8N271 834 aa30.57■■■□□ 2.48
LMNB2-204ENST00000527409 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.57■■■□□ 2.48
LMNB2-204ENST00000527409 SPG7Q9UQ90 795 aa30.57■■■□□ 2.48
LMNB2-204ENST00000527409 LRP5O75197 1615 aa30.57■■■□□ 2.48
LMNB2-204ENST00000527409 PRIM1P49642 420 aaKnown RBP30.55■■■□□ 2.48
LMNB2-204ENST00000527409 SYTL4Q96C24 671 aaPredicted RBP30.55■■■□□ 2.48
LMNB2-204ENST00000527409 CYP27B1O15528 508 aa30.54■■■□□ 2.48
LMNB2-204ENST00000527409 MTHFSP49914 203 aa30.52■■■□□ 2.48
LMNB2-204ENST00000527409 TOGARAM1Q9Y4F4 1720 aa30.5■■■□□ 2.47
LMNB2-204ENST00000527409 LY75O60449 1722 aa30.5■■■□□ 2.47
LMNB2-204ENST00000527409 IL13P35225 146 aa30.49■■■□□ 2.47
LMNB2-204ENST00000527409 ANO8Q9HCE9 1232 aaPredicted RBP30.49■■■□□ 2.47
LMNB2-204ENST00000527409 PAPPAQ13219 1627 aa30.48■■■□□ 2.47
LMNB2-204ENST00000527409 ITGB4P16144 1822 aa30.48■■■□□ 2.47
LMNB2-204ENST00000527409 NKX1-1Q15270 411 aaPredicted RBP30.47■■■□□ 2.47
LMNB2-204ENST00000527409 KDRP35968 1356 aa30.45■■■□□ 2.47
LMNB2-204ENST00000527409 CNGB1Q14028 1251 aaPredicted RBP30.45■■■□□ 2.47
LMNB2-204ENST00000527409 SLC27A3Q5K4L6 730 aa30.45■■■□□ 2.47
LMNB2-204ENST00000527409 IFNL2Q8IZJ0 200 aa30.45■■■□□ 2.47
LMNB2-204ENST00000527409 STK32BQ9NY57 414 aa30.44■■■□□ 2.46
LMNB2-204ENST00000527409 PHKG2P15735 406 aa30.43■■■□□ 2.46
LMNB2-204ENST00000527409 PLEKHO1Q53GL0 409 aaPredicted RBP30.42■■■□□ 2.46
LMNB2-204ENST00000527409 SULT6B1Q6IMI4 303 aa30.42■■■□□ 2.46
LMNB2-204ENST00000527409 AEBP1Q8IUX7 1158 aa30.42■■■□□ 2.46
LMNB2-204ENST00000527409 CASZ1Q86V15 1759 aa30.41■■■□□ 2.46
LMNB2-204ENST00000527409 SLC15A2Q16348 729 aa30.41■■■□□ 2.46
LMNB2-204ENST00000527409 AMOTQ4VCS5 1084 aa30.41■■■□□ 2.46
LMNB2-204ENST00000527409 DIAPH1O60610 1272 aaKnown RBP30.4■■■□□ 2.46
LMNB2-204ENST00000527409 LRRC4BQ9NT99 713 aa30.4■■■□□ 2.46
LMNB2-204ENST00000527409 COL3A1P02461 1466 aaPredicted RBP30.39■■■□□ 2.46
LMNB2-204ENST00000527409 MPRIPQ6WCQ1 1025 aa30.39■■■□□ 2.46
LMNB2-204ENST00000527409 HSP90AB1P08238 724 aaKnown RBP30.36■■■□□ 2.45
LMNB2-204ENST00000527409 QSER1Q2KHR3 1735 aa30.34■■■□□ 2.45
LMNB2-204ENST00000527409 ZNF530Q6P9A1 599 aaPredicted RBP30.34■■■□□ 2.45
LMNB2-204ENST00000527409 CCNL1Q9UK58 526 aaPredicted RBP30.34■■■□□ 2.45
LMNB2-204ENST00000527409 PALLDQ8WX93 1383 aa30.33■■■□□ 2.45
LMNB2-204ENST00000527409 SMARCC1Q92922 1105 aaPredicted RBP30.33■■■□□ 2.45
LMNB2-204ENST00000527409 TMOD3Q9NYL9 352 aa30.33■■■□□ 2.45
LMNB2-204ENST00000527409 PIGBQ92521 554 aa30.32■■■□□ 2.44
LMNB2-204ENST00000527409 DCAF5Q96JK2 942 aa30.32■■■□□ 2.44
LMNB2-204ENST00000527409 C5P01031 1676 aa30.31■■■□□ 2.44
LMNB2-204ENST00000527409 HMGB2P26583 209 aaKnown RBP30.31■■■□□ 2.44
LMNB2-204ENST00000527409 C1orf141Q5JVX7 400 aa30.31■■■□□ 2.44
LMNB2-204ENST00000527409 CFAP53Q96M91 514 aa30.31■■■□□ 2.44
LMNB2-204ENST00000527409 SPON1Q9HCB6 807 aa30.31■■■□□ 2.44
LMNB2-204ENST00000527409 HMOX1P09601 288 aa30.3■■■□□ 2.44
LMNB2-204ENST00000527409 ZNF827Q17R98 1081 aa30.3■■■□□ 2.44
LMNB2-204ENST00000527409 ERVV-2B6SEH9 535 aa30.29■■■□□ 2.44
LMNB2-204ENST00000527409 PPP2R1AP30153 589 aa30.29■■■□□ 2.44
LMNB2-204ENST00000527409 AKT1S1Q96B36 256 aa30.29■■■□□ 2.44
LMNB2-204ENST00000527409 TAF1LQ8IZX4 1826 aa30.29■■■□□ 2.44
LMNB2-204ENST00000527409 ZEB1P37275 1124 aaPredicted RBP30.28■■■□□ 2.44
LMNB2-204ENST00000527409 KCNQ4P56696 695 aa30.28■■■□□ 2.44
LMNB2-204ENST00000527409 KDM6AO15550 1401 aaPredicted RBP30.28■■■□□ 2.44
LMNB2-204ENST00000527409 TUBGCP6Q96RT7 1819 aa30.27■■■□□ 2.44
LMNB2-204ENST00000527409 PDGFDQ9GZP0 370 aaPredicted RBP30.27■■■□□ 2.44
LMNB2-204ENST00000527409 SCN11AQ9UI33 1791 aa30.26■■■□□ 2.43
LMNB2-204ENST00000527409 U2SURPO15042 1029 aaKnown RBP30.25■■■□□ 2.43
LMNB2-204ENST00000527409 AKAP4Q5JQC9 854 aa30.23■■■□□ 2.43
LMNB2-204ENST00000527409 TFCP2L1Q9NZI6 479 aa30.22■■■□□ 2.43
LMNB2-204ENST00000527409 VIRMAQ69YN4 1812 aaKnown RBP30.22■■■□□ 2.43
LMNB2-204ENST00000527409 ZBTB7AO95365 584 aa30.21■■■□□ 2.43
LMNB2-204ENST00000527409 CABP4P57796 275 aa30.2■■■□□ 2.43
LMNB2-204ENST00000527409 MTFR1LQ9H019 292 aa30.2■■■□□ 2.43
LMNB2-204ENST00000527409 ASAP1Q9ULH1 1129 aa30.2■■■□□ 2.43
LMNB2-204ENST00000527409 NUDCQ9Y266 331 aa30.2■■■□□ 2.43
LMNB2-204ENST00000527409 C4BP0C0L5 1744 aa30.19■■■□□ 2.42
LMNB2-204ENST00000527409 PNPLA7Q6ZV29 1317 aa30.19■■■□□ 2.42
LMNB2-204ENST00000527409 ZNF831Q5JPB2 1677 aa30.18■■■□□ 2.42
LMNB2-204ENST00000527409 LOC102724428A0A0B4J2F2 783 aa30.18■■■□□ 2.42
LMNB2-204ENST00000527409 SIK1P57059 783 aa30.18■■■□□ 2.42
LMNB2-204ENST00000527409 ATG3Q9NT62 314 aa30.18■■■□□ 2.42
LMNB2-204ENST00000527409 PPP1R1BQ9UD71 204 aaPredicted RBP30.17■■■□□ 2.42
LMNB2-204ENST00000527409 DDX10Q13206 875 aaKnown RBP30.16■■■□□ 2.42
LMNB2-204ENST00000527409 MTHFSDQ2M296 383 aaKnown RBP30.16■■■□□ 2.42
LMNB2-204ENST00000527409 SLC16A10Q8TF71 515 aa30.16■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms