RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 TBC1D9Q6ZT07 1266 aa15.52■□□□□ 0.07
CAPN1-208ENST00000527323 GOLGA6L22H0YM25 854 aa15.51■□□□□ 0.07
CAPN1-208ENST00000527323 K7ELQ4 463 aaPredicted RBP15.51■□□□□ 0.07
CAPN1-208ENST00000527323 ZBTB7BO15156 539 aaPredicted RBP15.51■□□□□ 0.07
CAPN1-208ENST00000527323 FCHSD2O94868 740 aa15.51■□□□□ 0.07
CAPN1-208ENST00000527323 CD2BP2O95400 341 aaKnown RBP15.51■□□□□ 0.07
CAPN1-208ENST00000527323 ATP7BP35670 1465 aa15.5■□□□□ 0.07
CAPN1-208ENST00000527323 PHF8Q9UPP1 1060 aa15.5■□□□□ 0.07
CAPN1-208ENST00000527323 PTMSP20962 102 aa15.49■□□□□ 0.07
CAPN1-208ENST00000527323 AEBP1Q8IUX7 1158 aa15.49■□□□□ 0.07
CAPN1-208ENST00000527323 KIF2CQ99661 725 aa15.49■□□□□ 0.07
CAPN1-208ENST00000527323 ADGRB2O60241 1585 aa15.49■□□□□ 0.07
CAPN1-208ENST00000527323 SSFA2P28290 1259 aa15.49■□□□□ 0.07
CAPN1-208ENST00000527323 USP32Q8NFA0 1604 aa15.49■□□□□ 0.07
CAPN1-208ENST00000527323 FAM135BQ49AJ0 1406 aa15.49■□□□□ 0.07
CAPN1-208ENST00000527323 TMEM94Q12767 1356 aa15.48■□□□□ 0.07
CAPN1-208ENST00000527323 VAMP4O75379 141 aa15.48■□□□□ 0.07
CAPN1-208ENST00000527323 USHBP1Q8N6Y0 703 aa15.48■□□□□ 0.07
CAPN1-208ENST00000527323 TSPYL6Q8N831 410 aa15.48■□□□□ 0.07
CAPN1-208ENST00000527323 ANP32BQ92688 251 aaKnown RBP15.48■□□□□ 0.07
CAPN1-208ENST00000527323 ZNF428Q96B54 188 aa15.48■□□□□ 0.07
CAPN1-208ENST00000527323 NCOA3Q9Y6Q9 1424 aa15.48■□□□□ 0.07
CAPN1-208ENST00000527323 MRPL50Q8N5N7 158 aaKnown RBP15.47■□□□□ 0.07
CAPN1-208ENST00000527323 DDX49Q9Y6V7 483 aaKnown RBP15.47■□□□□ 0.07
CAPN1-208ENST00000527323 NCLP19338 710 aaKnown RBP15.47■□□□□ 0.07
CAPN1-208ENST00000527323 GAS2L2Q8NHY3 880 aa15.47■□□□□ 0.07
CAPN1-208ENST00000527323 TECPR2O15040 1411 aa15.47■□□□□ 0.07
CAPN1-208ENST00000527323 PLCB2Q00722 1185 aa15.47■□□□□ 0.07
CAPN1-208ENST00000527323 PHACTR3Q96KR7 559 aa15.47■□□□□ 0.07
CAPN1-208ENST00000527323 CDC45O75419 566 aa15.46■□□□□ 0.07
CAPN1-208ENST00000527323 ATF3P18847 181 aa15.46■□□□□ 0.07
CAPN1-208ENST00000527323 CALD1Q05682 793 aaKnown RBP15.46■□□□□ 0.07
CAPN1-208ENST00000527323 HSP90AA2PQ14568 343 aaPredicted RBP15.46■□□□□ 0.07
CAPN1-208ENST00000527323 GLIPR1L2Q4G1C9 344 aa15.46■□□□□ 0.07
CAPN1-208ENST00000527323 ERBB4Q15303 1308 aa15.46■□□□□ 0.07
CAPN1-208ENST00000527323 ZC3H6P61129 1189 aaKnown RBP15.46■□□□□ 0.07
CAPN1-208ENST00000527323 DCTN1Q14203 1278 aa15.45■□□□□ 0.06
CAPN1-208ENST00000527323 NFE2L2Q16236 605 aa15.45■□□□□ 0.06
CAPN1-208ENST00000527323 GNAI1P63096 354 aa15.45■□□□□ 0.06
CAPN1-208ENST00000527323 DLC1Q96QB1 1528 aa15.45■□□□□ 0.06
CAPN1-208ENST00000527323 SIRT2Q8IXJ6 389 aa15.45■□□□□ 0.06
CAPN1-208ENST00000527323 ARHGAP45Q92619 1136 aa15.45■□□□□ 0.06
CAPN1-208ENST00000527323 AMPHP49418 695 aa15.44■□□□□ 0.06
CAPN1-208ENST00000527323 TWISTNBQ3B726 338 aaPredicted RBP15.44■□□□□ 0.06
CAPN1-208ENST00000527323 SIRT1Q96EB6 747 aa15.44■□□□□ 0.06
CAPN1-208ENST00000527323 PLEKHG3A1L390 1219 aa15.43■□□□□ 0.06
CAPN1-208ENST00000527323 NASPP49321 788 aaPredicted RBP15.43■□□□□ 0.06
CAPN1-208ENST00000527323 DIP2AQ14689 1571 aa15.43■□□□□ 0.06
CAPN1-208ENST00000527323 COL3A1P02461 1466 aaPredicted RBP15.43■□□□□ 0.06
CAPN1-208ENST00000527323 CPSF1Q10570 1443 aaKnown RBP15.43■□□□□ 0.06
CAPN1-208ENST00000527323 FAM83GA6ND36 823 aa15.43■□□□□ 0.06
CAPN1-208ENST00000527323 ZBTB22O15209 634 aa15.43■□□□□ 0.06
CAPN1-208ENST00000527323 MBIPQ9NS73 344 aa15.43■□□□□ 0.06
CAPN1-208ENST00000527323 BRPF1P55201 1214 aaPredicted RBP15.42■□□□□ 0.06
CAPN1-208ENST00000527323 APBB1O00213 710 aa15.42■□□□□ 0.06
CAPN1-208ENST00000527323 BAG4O95429 457 aaKnown RBP15.42■□□□□ 0.06
CAPN1-208ENST00000527323 MCTP1Q6DN14 999 aa15.42■□□□□ 0.06
CAPN1-208ENST00000527323 API5Q9BZZ5 524 aaKnown RBP15.42■□□□□ 0.06
CAPN1-208ENST00000527323 MAP3K19Q56UN5 1328 aa15.41■□□□□ 0.06
CAPN1-208ENST00000527323 SULT6B1Q6IMI4 303 aa15.41■□□□□ 0.06
CAPN1-208ENST00000527323 C19orf44Q9H6X5 657 aa15.41■□□□□ 0.06
CAPN1-208ENST00000527323 IFT57Q9NWB7 429 aa15.41■□□□□ 0.06
CAPN1-208ENST00000527323 C8orf58Q8NAV2 365 aa15.4■□□□□ 0.06
CAPN1-208ENST00000527323 USP6P35125 1406 aa15.4■□□□□ 0.06
CAPN1-208ENST00000527323 PNPLA6Q8IY17 1366 aa15.4■□□□□ 0.06
CAPN1-208ENST00000527323 CCDC173Q0VFZ6 552 aa15.4■□□□□ 0.06
CAPN1-208ENST00000527323 RABEP1Q15276 862 aa15.4■□□□□ 0.06
CAPN1-208ENST00000527323 CHRNA2Q15822 529 aa15.4■□□□□ 0.06
CAPN1-208ENST00000527323 C16orf71Q8IYS4 520 aaPredicted RBP15.4■□□□□ 0.06
CAPN1-208ENST00000527323 GSPT1P15170 499 aaKnown RBP15.4■□□□□ 0.06
CAPN1-208ENST00000527323 KRT28Q7Z3Y7 464 aa15.4■□□□□ 0.06
CAPN1-208ENST00000527323 PLEKHM2Q8IWE5 1019 aa15.4■□□□□ 0.06
CAPN1-208ENST00000527323 LMTK3Q96Q04 1460 aa15.39■□□□□ 0.05
CAPN1-208ENST00000527323 EDC4Q6P2E9 1401 aaKnown RBP15.39■□□□□ 0.05
CAPN1-208ENST00000527323 KLHL40Q2TBA0 621 aa15.39■□□□□ 0.05
CAPN1-208ENST00000527323 LRRC59Q96AG4 307 aaKnown RBP15.39■□□□□ 0.05
CAPN1-208ENST00000527323 EIF4A2Q14240 407 aaKnown RBP15.38■□□□□ 0.05
CAPN1-208ENST00000527323 CAVIN1Q6NZI2 390 aaKnown RBP15.38■□□□□ 0.05
CAPN1-208ENST00000527323 PTCH1Q13635 1447 aa15.38■□□□□ 0.05
CAPN1-208ENST00000527323 MAP2P11137 1827 aaKnown RBP15.38■□□□□ 0.05
CAPN1-208ENST00000527323 RRP9O43818 475 aaKnown RBP15.38■□□□□ 0.05
CAPN1-208ENST00000527323 NUCB2P80303 420 aa15.38■□□□□ 0.05
CAPN1-208ENST00000527323 ABCC4O15439 1325 aa15.38■□□□□ 0.05
CAPN1-208ENST00000527323 CFAP44Q96MT7 982 aa15.37■□□□□ 0.05
CAPN1-208ENST00000527323 MSNP26038 577 aaKnown RBP15.37■□□□□ 0.05
CAPN1-208ENST00000527323 LMOD3Q0VAK6 560 aa15.37■□□□□ 0.05
CAPN1-208ENST00000527323 INTS3Q68E01 1043 aaKnown RBP15.37■□□□□ 0.05
CAPN1-208ENST00000527323 CASC1Q6TDU7 716 aa15.37■□□□□ 0.05
CAPN1-208ENST00000527323 MIS18AQ9NYP9 233 aa15.37■□□□□ 0.05
CAPN1-208ENST00000527323 NALCNQ8IZF0 1738 aa15.36■□□□□ 0.05
CAPN1-208ENST00000527323 PIP4K2BP78356 416 aa15.36■□□□□ 0.05
CAPN1-208ENST00000527323 TTC22Q5TAA0 569 aa15.36■□□□□ 0.05
CAPN1-208ENST00000527323 CHD2O14647 1828 aaKnown RBP15.36■□□□□ 0.05
CAPN1-208ENST00000527323 VSIG10Q8N0Z9 540 aa15.36■□□□□ 0.05
CAPN1-208ENST00000527323 DCTPP1Q9H773 170 aa15.36■□□□□ 0.05
CAPN1-208ENST00000527323 USP26Q9BXU7 913 aa15.35■□□□□ 0.05
CAPN1-208ENST00000527323 ZSCAN30Q86W11 494 aa15.35■□□□□ 0.05
CAPN1-208ENST00000527323 ZNF853P0CG23 659 aa15.35■□□□□ 0.05
CAPN1-208ENST00000527323 IL13P35225 146 aa15.35■□□□□ 0.05
CAPN1-208ENST00000527323 OTUD7AQ8TE49 926 aaPredicted RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms