RNA–Protein interactions for RNA: ENST00000527243.5

CTSB-214, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-214ENST00000527243 SBF2Q86WG5 1849 aa15.24■□□□□ 0.03
CTSB-214ENST00000527243 SHANK3Q9BYB0 1731 aa15.24■□□□□ 0.03
CTSB-214ENST00000527243 TATP17735 454 aaPredicted RBP15.24■□□□□ 0.03
CTSB-214ENST00000527243 IL13P35225 146 aa15.24■□□□□ 0.03
CTSB-214ENST00000527243 APBA3O96018 575 aa15.23■□□□□ 0.03
CTSB-214ENST00000527243 PARD3Q8TEW0 1356 aa15.23■□□□□ 0.03
CTSB-214ENST00000527243 KCNQ2O43526 872 aa15.22■□□□□ 0.03
CTSB-214ENST00000527243 DDX54Q8TDD1 881 aaKnown RBP15.22■□□□□ 0.03
CTSB-214ENST00000527243 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.22■□□□□ 0.03
CTSB-214ENST00000527243 KDRP35968 1356 aa15.22■□□□□ 0.03
CTSB-214ENST00000527243 COL3A1P02461 1466 aaPredicted RBP15.21■□□□□ 0.03
CTSB-214ENST00000527243 PLSCR1O15162 318 aa15.21■□□□□ 0.03
CTSB-214ENST00000527243 CYP27B1O15528 508 aa15.21■□□□□ 0.03
CTSB-214ENST00000527243 EZH2Q15910 746 aaKnown RBP15.21■□□□□ 0.03
CTSB-214ENST00000527243 PKD1L3Q7Z443 1732 aa15.2■□□□□ 0.02
CTSB-214ENST00000527243 NHSQ6T4R5 1651 aa15.2■□□□□ 0.02
CTSB-214ENST00000527243 PCDH11XQ9BZA7 1347 aa15.19■□□□□ 0.02
CTSB-214ENST00000527243 PCDH11YQ9BZA8 1340 aa15.19■□□□□ 0.02
CTSB-214ENST00000527243 AEBP1Q8IUX7 1158 aa15.19■□□□□ 0.02
CTSB-214ENST00000527243 ACSBG1Q96GR2 724 aa15.19■□□□□ 0.02
CTSB-214ENST00000527243 NKX1-1Q15270 411 aaPredicted RBP15.18■□□□□ 0.02
CTSB-214ENST00000527243 PROM2Q8N271 834 aa15.18■□□□□ 0.02
CTSB-214ENST00000527243 RGPD3A6NKT7 1758 aaPredicted RBP15.17■□□□□ 0.02
CTSB-214ENST00000527243 RGPD4Q7Z3J3 1758 aa15.17■□□□□ 0.02
CTSB-214ENST00000527243 RREB1Q92766 1687 aa15.17■□□□□ 0.02
CTSB-214ENST00000527243 PPP2R1AP30153 589 aa15.17■□□□□ 0.02
CTSB-214ENST00000527243 CNGB1Q14028 1251 aaPredicted RBP15.16■□□□□ 0.02
CTSB-214ENST00000527243 SPG7Q9UQ90 795 aa15.16■□□□□ 0.02
CTSB-214ENST00000527243 DIAPH1O60610 1272 aaKnown RBP15.15■□□□□ 0.02
CTSB-214ENST00000527243 PRIM1P49642 420 aaKnown RBP15.15■□□□□ 0.02
CTSB-214ENST00000527243 DDX10Q13206 875 aaKnown RBP15.15■□□□□ 0.02
CTSB-214ENST00000527243 SULT6B1Q6IMI4 303 aa15.15■□□□□ 0.02
CTSB-214ENST00000527243 PHKG2P15735 406 aa15.14■□□□□ 0.01
CTSB-214ENST00000527243 NUP188Q5SRE5 1749 aa15.13■□□□□ 0.01
CTSB-214ENST00000527243 DOT1LQ8TEK3 1739 aa15.13■□□□□ 0.01
CTSB-214ENST00000527243 BTAF1O14981 1849 aa15.13■□□□□ 0.01
CTSB-214ENST00000527243 TXNRD1Q16881 649 aa15.12■□□□□ 0.01
CTSB-214ENST00000527243 AMOTQ4VCS5 1084 aa15.12■□□□□ 0.01
CTSB-214ENST00000527243 IFNL2Q8IZJ0 200 aa15.12■□□□□ 0.01
CTSB-214ENST00000527243 TOGARAM1Q9Y4F4 1720 aa15.12■□□□□ 0.01
CTSB-214ENST00000527243 PLEKHO1Q53GL0 409 aaPredicted RBP15.11■□□□□ 0.01
CTSB-214ENST00000527243 ANO8Q9HCE9 1232 aaPredicted RBP15.1■□□□□ 0.01
CTSB-214ENST00000527243 ZNF316A6NFI3 1004 aaPredicted RBP15.09■□□□□ 0.01
CTSB-214ENST00000527243 HMOX1P09601 288 aa15.09■□□□□ 0.01
CTSB-214ENST00000527243 RALBP1Q15311 655 aa15.09■□□□□ 0.01
CTSB-214ENST00000527243 ZNF530Q6P9A1 599 aaPredicted RBP15.09■□□□□ 0.01
CTSB-214ENST00000527243 CFAP53Q96M91 514 aa15.09■□□□□ 0.01
CTSB-214ENST00000527243 LRRC4BQ9NT99 713 aa15.09■□□□□ 0.01
CTSB-214ENST00000527243 KDM6AO15550 1401 aaPredicted RBP15.09■□□□□ 0.01
CTSB-214ENST00000527243 PIGBQ92521 554 aa15.08■□□□□ 0
CTSB-214ENST00000527243 SYTL4Q96C24 671 aaPredicted RBP15.08■□□□□ 0
CTSB-214ENST00000527243 KAT6BQ8WYB5 2073 aa15.07■□□□□ 0
CTSB-214ENST00000527243 PAPPAQ13219 1627 aa15.07■□□□□ 0
CTSB-214ENST00000527243 SRCAPQ6ZRS2 3230 aa15.07■□□□□ 0
CTSB-214ENST00000527243 PSDA5PKW4 1024 aaPredicted RBP15.07■□□□□ 0
CTSB-214ENST00000527243 R3HDM1Q15032 1099 aaKnown RBP15.07■□□□□ 0
CTSB-214ENST00000527243 DCAF5Q96JK2 942 aa15.07■□□□□ 0
CTSB-214ENST00000527243 U2SURPO15042 1029 aaKnown RBP15.06■□□□□ 0
CTSB-214ENST00000527243 HSP90AB1P08238 724 aaKnown RBP15.06■□□□□ 0
CTSB-214ENST00000527243 SLC27A3Q5K4L6 730 aa15.06■□□□□ 0
CTSB-214ENST00000527243 NBPF14Q5TI25 921 aa15.06■□□□□ 0
CTSB-214ENST00000527243 RSPH6AQ9H0K4 717 aa15.06■□□□□ 0
CTSB-214ENST00000527243 ERVV-2B6SEH9 535 aa15.05■□□□□ -0
CTSB-214ENST00000527243 MTHFSDQ2M296 383 aaKnown RBP15.05■□□□□ -0
CTSB-214ENST00000527243 MPRIPQ6WCQ1 1025 aa15.05■□□□□ -0
CTSB-214ENST00000527243 LY75O60449 1722 aa15.04■□□□□ -0
CTSB-214ENST00000527243 AKAP4Q5JQC9 854 aa15.04■□□□□ -0
CTSB-214ENST00000527243 NUDCQ9Y266 331 aa15.04■□□□□ -0
CTSB-214ENST00000527243 ITGB4P16144 1822 aa15.03■□□□□ -0
CTSB-214ENST00000527243 PALLDQ8WX93 1383 aa15.03■□□□□ -0
CTSB-214ENST00000527243 C1orf141Q5JVX7 400 aa15.03■□□□□ -0
CTSB-214ENST00000527243 TMOD3Q9NYL9 352 aa15.03■□□□□ -0
CTSB-214ENST00000527243 MYBBP1AQ9BQG0 1328 aaKnown RBP15.02■□□□□ -0
CTSB-214ENST00000527243 FCHSD2O94868 740 aa15.02■□□□□ -0
CTSB-214ENST00000527243 SLC15A2Q16348 729 aa15.02■□□□□ -0
CTSB-214ENST00000527243 SMARCC1Q92922 1105 aaPredicted RBP15.02■□□□□ -0
CTSB-214ENST00000527243 AKT1S1Q96B36 256 aa15.02■□□□□ -0
CTSB-214ENST00000527243 PHACTR3Q96KR7 559 aa15.02■□□□□ -0
CTSB-214ENST00000527243 PRKRIP1Q9H875 184 aaPredicted RBP15.02■□□□□ -0
CTSB-214ENST00000527243 ADAMTS7Q9UKP4 1686 aa15.02□□□□□ -0.01
CTSB-214ENST00000527243 U2AF1L5P0DN76 240 aaPredicted RBP15.01□□□□□ -0.01
CTSB-214ENST00000527243 PRKAR2BP31323 418 aa15.01□□□□□ -0.01
CTSB-214ENST00000527243 KCNQ4P56696 695 aa15.01□□□□□ -0.01
CTSB-214ENST00000527243 U2AF1Q01081 240 aaKnown RBP eCLIP15.01□□□□□ -0.01
CTSB-214ENST00000527243 ZNF827Q17R98 1081 aa15.01□□□□□ -0.01
CTSB-214ENST00000527243 ATG3Q9NT62 314 aa15.01□□□□□ -0.01
CTSB-214ENST00000527243 ASAP1Q9ULH1 1129 aa15.01□□□□□ -0.01
CTSB-214ENST00000527243 MRC1P22897 1456 aa15.01□□□□□ -0.01
CTSB-214ENST00000527243 DIEXFQ68CQ4 756 aaKnown RBP15□□□□□ -0.01
CTSB-214ENST00000527243 LGR6Q9HBX8 967 aa15□□□□□ -0.01
CTSB-214ENST00000527243 STK32BQ9NY57 414 aa15□□□□□ -0.01
CTSB-214ENST00000527243 CCNL1Q9UK58 526 aaPredicted RBP15□□□□□ -0.01
CTSB-214ENST00000527243 RNMTO43148 476 aaKnown RBP14.99□□□□□ -0.01
CTSB-214ENST00000527243 GAS2L2Q8NHY3 880 aa14.99□□□□□ -0.01
CTSB-214ENST00000527243 LOC102724428A0A0B4J2F2 783 aa14.98□□□□□ -0.01
CTSB-214ENST00000527243 SIK1P57059 783 aa14.98□□□□□ -0.01
CTSB-214ENST00000527243 CABP4P57796 275 aa14.98□□□□□ -0.01
CTSB-214ENST00000527243 PDGFDQ9GZP0 370 aaPredicted RBP14.98□□□□□ -0.01
CTSB-214ENST00000527243 CASZ1Q86V15 1759 aa14.98□□□□□ -0.01
CTSB-214ENST00000527243 SCN11AQ9UI33 1791 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms