RNA–Protein interactions for RNA: ENST00000527133.2

CLNS1A-207, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-207ENST00000527133 TERF2IPQ9NYB0 399 aa18.49■□□□□ 0.55
CLNS1A-207ENST00000527133 A0A1W2PP64 1363 aa18.49■□□□□ 0.55
CLNS1A-207ENST00000527133 DOT1LQ8TEK3 1739 aa18.49■□□□□ 0.55
CLNS1A-207ENST00000527133 FAM208AQ9UK61 1670 aaKnown RBP18.48■□□□□ 0.55
CLNS1A-207ENST00000527133 NSD2O96028 1365 aa18.48■□□□□ 0.55
CLNS1A-207ENST00000527133 MSH5O43196 834 aa18.48■□□□□ 0.55
CLNS1A-207ENST00000527133 YBX3P16989 372 aaKnown RBP eCLIP18.48■□□□□ 0.55
CLNS1A-207ENST00000527133 CARD11Q9BXL7 1154 aa18.48■□□□□ 0.55
CLNS1A-207ENST00000527133 CCNL1Q9UK58 526 aaPredicted RBP18.47■□□□□ 0.55
CLNS1A-207ENST00000527133 LY75O60449 1722 aa18.46■□□□□ 0.55
CLNS1A-207ENST00000527133 GRIN3BO60391 1043 aa18.46■□□□□ 0.55
CLNS1A-207ENST00000527133 IFFO2Q5TF58 517 aa18.45■□□□□ 0.54
CLNS1A-207ENST00000527133 ZCRB1Q8TBF4 217 aaKnown RBP18.45■□□□□ 0.54
CLNS1A-207ENST00000527133 MAP3K19Q56UN5 1328 aa18.45■□□□□ 0.54
CLNS1A-207ENST00000527133 HOXC9P31274 260 aa18.44■□□□□ 0.54
CLNS1A-207ENST00000527133 MSL1Q68DK7 614 aa18.44■□□□□ 0.54
CLNS1A-207ENST00000527133 COL23A1Q86Y22 540 aaPredicted RBP18.44■□□□□ 0.54
CLNS1A-207ENST00000527133 MEGF6O75095 1541 aa18.44■□□□□ 0.54
CLNS1A-207ENST00000527133 AMPHP49418 695 aa18.43■□□□□ 0.54
CLNS1A-207ENST00000527133 USP47Q96K76 1375 aa18.42■□□□□ 0.54
CLNS1A-207ENST00000527133 FBLN1P23142 703 aa18.42■□□□□ 0.54
CLNS1A-207ENST00000527133 COG3Q96JB2 828 aa18.42■□□□□ 0.54
CLNS1A-207ENST00000527133 RGPD2P0DJD1 1756 aa18.41■□□□□ 0.54
CLNS1A-207ENST00000527133 ATP10DQ9P241 1426 aa18.4■□□□□ 0.54
CLNS1A-207ENST00000527133 USHBP1Q8N6Y0 703 aa18.38■□□□□ 0.53
CLNS1A-207ENST00000527133 PUS7Q96PZ0 661 aaKnown RBP18.38■□□□□ 0.53
CLNS1A-207ENST00000527133 NBPF6Q5VWK0 638 aa18.37■□□□□ 0.53
CLNS1A-207ENST00000527133 NBPF4Q96M43 638 aa18.37■□□□□ 0.53
CLNS1A-207ENST00000527133 C5P01031 1676 aa18.36■□□□□ 0.53
CLNS1A-207ENST00000527133 RAPGEF4Q8WZA2 1011 aa18.36■□□□□ 0.53
CLNS1A-207ENST00000527133 GPBP1L1Q9HC44 474 aaPredicted RBP18.36■□□□□ 0.53
CLNS1A-207ENST00000527133 CD2APQ9Y5K6 639 aa18.36■□□□□ 0.53
CLNS1A-207ENST00000527133 RTL1A6NKG5 1358 aa18.35■□□□□ 0.53
CLNS1A-207ENST00000527133 RRS1Q15050 365 aaKnown RBP18.35■□□□□ 0.53
CLNS1A-207ENST00000527133 ZNF526Q8TF50 670 aaPredicted RBP18.35■□□□□ 0.53
CLNS1A-207ENST00000527133 CGNL1Q0VF96 1302 aa18.34■□□□□ 0.53
CLNS1A-207ENST00000527133 PALLDQ8WX93 1383 aa18.33■□□□□ 0.53
CLNS1A-207ENST00000527133 FLAD1Q8NFF5 587 aa18.33■□□□□ 0.52
CLNS1A-207ENST00000527133 SMG6Q86US8 1419 aaKnown RBP18.32■□□□□ 0.52
CLNS1A-207ENST00000527133 TATP17735 454 aaPredicted RBP18.32■□□□□ 0.52
CLNS1A-207ENST00000527133 MPRIPQ6WCQ1 1025 aa18.32■□□□□ 0.52
CLNS1A-207ENST00000527133 TESK2Q96S53 571 aa18.32■□□□□ 0.52
CLNS1A-207ENST00000527133 ADCY9O60503 1353 aa18.31■□□□□ 0.52
CLNS1A-207ENST00000527133 PCDH11XQ9BZA7 1347 aa18.31■□□□□ 0.52
CLNS1A-207ENST00000527133 PCDH11YQ9BZA8 1340 aa18.31■□□□□ 0.52
CLNS1A-207ENST00000527133 WWC3Q9ULE0 1092 aa18.31■□□□□ 0.52
CLNS1A-207ENST00000527133 ST20-MTHFSA0A0A6YYL1 179 aa18.3■□□□□ 0.52
CLNS1A-207ENST00000527133 AK7Q96M32 723 aa18.3■□□□□ 0.52
CLNS1A-207ENST00000527133 GGNBP2Q9H3C7 697 aa18.3■□□□□ 0.52
CLNS1A-207ENST00000527133 TAF1LQ8IZX4 1826 aa18.3■□□□□ 0.52
CLNS1A-207ENST00000527133 PHF14O94880 888 aa18.29■□□□□ 0.52
CLNS1A-207ENST00000527133 HSPA6P17066 643 aa18.29■□□□□ 0.52
CLNS1A-207ENST00000527133 HMGB2P26583 209 aaKnown RBP18.29■□□□□ 0.52
CLNS1A-207ENST00000527133 AMIGO3Q86WK7 504 aa18.29■□□□□ 0.52
CLNS1A-207ENST00000527133 TONSLQ96HA7 1378 aa18.29■□□□□ 0.52
CLNS1A-207ENST00000527133 IGSF1Q8N6C5 1336 aa18.28■□□□□ 0.52
CLNS1A-207ENST00000527133 FYB1O15117 783 aa18.28■□□□□ 0.52
CLNS1A-207ENST00000527133 HSP90AB2PQ58FF8 381 aa18.28■□□□□ 0.52
CLNS1A-207ENST00000527133 SMIM5Q71RC9 77 aa18.28■□□□□ 0.52
CLNS1A-207ENST00000527133 C4BP0C0L5 1744 aa18.28■□□□□ 0.52
CLNS1A-207ENST00000527133 CYP27B1O15528 508 aa18.27■□□□□ 0.52
CLNS1A-207ENST00000527133 SMARCC1Q92922 1105 aaPredicted RBP18.26■□□□□ 0.51
CLNS1A-207ENST00000527133 INSRP06213 1382 aa18.26■□□□□ 0.51
CLNS1A-207ENST00000527133 TOGARAM1Q9Y4F4 1720 aa18.26■□□□□ 0.51
CLNS1A-207ENST00000527133 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.25■□□□□ 0.51
CLNS1A-207ENST00000527133 FLT4P35916 1363 aa18.24■□□□□ 0.51
CLNS1A-207ENST00000527133 ITGB4P16144 1822 aa18.23■□□□□ 0.51
CLNS1A-207ENST00000527133 UBR3Q6ZT12 1888 aa18.23■□□□□ 0.51
CLNS1A-207ENST00000527133 SLC24A1O60721 1099 aa18.23■□□□□ 0.51
CLNS1A-207ENST00000527133 PIGBQ92521 554 aa18.23■□□□□ 0.51
CLNS1A-207ENST00000527133 NSD3Q9BZ95 1437 aa18.23■□□□□ 0.51
CLNS1A-207ENST00000527133 SSFA2P28290 1259 aa18.21■□□□□ 0.51
CLNS1A-207ENST00000527133 LINC00116Q8NCU8 138 aa18.21■□□□□ 0.51
CLNS1A-207ENST00000527133 LOC102724428A0A0B4J2F2 783 aa18.2■□□□□ 0.5
CLNS1A-207ENST00000527133 KIF3CO14782 793 aa18.2■□□□□ 0.5
CLNS1A-207ENST00000527133 SIK1P57059 783 aa18.2■□□□□ 0.5
CLNS1A-207ENST00000527133 PKD1L3Q7Z443 1732 aa18.2■□□□□ 0.5
CLNS1A-207ENST00000527133 KIF24Q5T7B8 1368 aa18.19■□□□□ 0.5
CLNS1A-207ENST00000527133 KIF20BQ96Q89 1820 aa18.19■□□□□ 0.5
CLNS1A-207ENST00000527133 GNPATO15228 680 aa18.18■□□□□ 0.5
CLNS1A-207ENST00000527133 TMF1P82094 1093 aa18.18■□□□□ 0.5
CLNS1A-207ENST00000527133 EMILIN1Q9Y6C2 1016 aa18.18■□□□□ 0.5
CLNS1A-207ENST00000527133 MAP2P11137 1827 aaKnown RBP18.17■□□□□ 0.5
CLNS1A-207ENST00000527133 NKX1-1Q15270 411 aaPredicted RBP18.17■□□□□ 0.5
CLNS1A-207ENST00000527133 TMOD3Q9NYL9 352 aa18.17■□□□□ 0.5
CLNS1A-207ENST00000527133 SPG7Q9UQ90 795 aa18.17■□□□□ 0.5
CLNS1A-207ENST00000527133 PPM1GO15355 546 aaPredicted RBP18.16■□□□□ 0.5
CLNS1A-207ENST00000527133 MMP10P09238 476 aa18.16■□□□□ 0.5
CLNS1A-207ENST00000527133 ITPK1Q13572 414 aa18.16■□□□□ 0.5
CLNS1A-207ENST00000527133 ASAP1Q9ULH1 1129 aa18.16■□□□□ 0.5
CLNS1A-207ENST00000527133 CICQ96RK0 1608 aaPredicted RBP18.16■□□□□ 0.5
CLNS1A-207ENST00000527133 ATP6V1AP38606 617 aa18.15■□□□□ 0.5
CLNS1A-207ENST00000527133 NCAPD2Q15021 1401 aa18.15■□□□□ 0.5
CLNS1A-207ENST00000527133 PXDNLA1KZ92 1463 aa18.14■□□□□ 0.5
CLNS1A-207ENST00000527133 APLP1P51693 650 aa18.13■□□□□ 0.49
CLNS1A-207ENST00000527133 CARD14Q9BXL6 1004 aa18.12■□□□□ 0.49
CLNS1A-207ENST00000527133 BCS1LQ9Y276 419 aa18.12■□□□□ 0.49
CLNS1A-207ENST00000527133 A0A0G2JLW4 131 aa18.11■□□□□ 0.49
CLNS1A-207ENST00000527133 EYA1Q99502 592 aa18.11■□□□□ 0.49
CLNS1A-207ENST00000527133 ATG3Q9NT62 314 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms