RNA–Protein interactions for RNA: ENST00000527025.5

CCDC90B-208, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 777 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-208ENST00000527025 DEFB132Q7Z7B7 95 aa12.24□□□□□ -0.45
CCDC90B-208ENST00000527025 CCDC7Q96M83 1385 aa12.24□□□□□ -0.45
CCDC90B-208ENST00000527025 NLRP2Q9NX02 1062 aa12.24□□□□□ -0.45
CCDC90B-208ENST00000527025 ANKRD26Q9UPS8 1709 aa12.24□□□□□ -0.45
CCDC90B-208ENST00000527025 FAM208AQ9UK61 1670 aaKnown RBP12.23□□□□□ -0.45
CCDC90B-208ENST00000527025 CGNL1Q0VF96 1302 aa12.23□□□□□ -0.45
CCDC90B-208ENST00000527025 AMPHP49418 695 aa12.23□□□□□ -0.45
CCDC90B-208ENST00000527025 MARCH10Q8NA82 808 aaPredicted RBP12.23□□□□□ -0.45
CCDC90B-208ENST00000527025 POLKQ9UBT6 870 aa12.23□□□□□ -0.45
CCDC90B-208ENST00000527025 TNS1Q9HBL0 1735 aaKnown RBP12.23□□□□□ -0.45
CCDC90B-208ENST00000527025 TNNT2P45379 298 aaPredicted RBP12.22□□□□□ -0.45
CCDC90B-208ENST00000527025 AMER1Q5JTC6 1135 aaPredicted RBP12.22□□□□□ -0.45
CCDC90B-208ENST00000527025 NBPF6Q5VWK0 638 aa12.22□□□□□ -0.45
CCDC90B-208ENST00000527025 NBPF4Q96M43 638 aa12.22□□□□□ -0.45
CCDC90B-208ENST00000527025 SBF2Q86WG5 1849 aa12.21□□□□□ -0.45
CCDC90B-208ENST00000527025 TRIM37O94972 964 aa12.21□□□□□ -0.45
CCDC90B-208ENST00000527025 PDE3BQ13370 1112 aa12.21□□□□□ -0.45
CCDC90B-208ENST00000527025 DDB1Q16531 1140 aa12.21□□□□□ -0.45
CCDC90B-208ENST00000527025 CCDC125Q86Z20 511 aa12.21□□□□□ -0.45
CCDC90B-208ENST00000527025 USHBP1Q8N6Y0 703 aa12.2□□□□□ -0.46
CCDC90B-208ENST00000527025 RTL1A6NKG5 1358 aa12.19□□□□□ -0.46
CCDC90B-208ENST00000527025 INSRP06213 1382 aa12.19□□□□□ -0.46
CCDC90B-208ENST00000527025 FAM196AQ6ZSG2 479 aa12.19□□□□□ -0.46
CCDC90B-208ENST00000527025 RGPD1P0DJD0 1748 aa12.19□□□□□ -0.46
CCDC90B-208ENST00000527025 FLT4P35916 1363 aa12.18□□□□□ -0.46
CCDC90B-208ENST00000527025 SHANK3Q9BYB0 1731 aa12.18□□□□□ -0.46
CCDC90B-208ENST00000527025 PPM1GO15355 546 aaPredicted RBP12.18□□□□□ -0.46
CCDC90B-208ENST00000527025 IL2RBP14784 551 aa12.18□□□□□ -0.46
CCDC90B-208ENST00000527025 EN1Q05925 392 aaPredicted RBP12.18□□□□□ -0.46
CCDC90B-208ENST00000527025 CDCA7Q9BWT1 371 aaPredicted RBP12.18□□□□□ -0.46
CCDC90B-208ENST00000527025 MEGF6O75095 1541 aa12.17□□□□□ -0.46
CCDC90B-208ENST00000527025 EXOC5O00471 708 aa12.17□□□□□ -0.46
CCDC90B-208ENST00000527025 GABBR2O75899 941 aa12.17□□□□□ -0.46
CCDC90B-208ENST00000527025 KNSTRNQ9Y448 316 aa12.17□□□□□ -0.46
CCDC90B-208ENST00000527025 KIF24Q5T7B8 1368 aa12.17□□□□□ -0.46
CCDC90B-208ENST00000527025 PRR29P0C7W0 189 aa12.16□□□□□ -0.46
CCDC90B-208ENST00000527025 MORC1Q86VD1 984 aa12.16□□□□□ -0.46
CCDC90B-208ENST00000527025 TNS2Q63HR2 1409 aa12.16□□□□□ -0.46
CCDC90B-208ENST00000527025 NSD2O96028 1365 aa12.16□□□□□ -0.46
CCDC90B-208ENST00000527025 OVOS2A0A0G2JMS6 1433 aa12.15□□□□□ -0.46
CCDC90B-208ENST00000527025 KCNQ2O43526 872 aa12.15□□□□□ -0.46
CCDC90B-208ENST00000527025 EZH2Q15910 746 aaKnown RBP12.15□□□□□ -0.46
CCDC90B-208ENST00000527025 CC2D1BQ5T0F9 858 aaKnown RBP12.15□□□□□ -0.46
CCDC90B-208ENST00000527025 CAMKK2Q96RR4 588 aa12.15□□□□□ -0.46
CCDC90B-208ENST00000527025 EYA1Q99502 592 aa12.15□□□□□ -0.46
CCDC90B-208ENST00000527025 BCL9O00512 1426 aa12.14□□□□□ -0.47
CCDC90B-208ENST00000527025 NCAPD2Q15021 1401 aa12.14□□□□□ -0.47
CCDC90B-208ENST00000527025 SMG6Q86US8 1419 aaKnown RBP12.14□□□□□ -0.47
CCDC90B-208ENST00000527025 SRCAPQ6ZRS2 3230 aa12.14□□□□□ -0.47
CCDC90B-208ENST00000527025 APBA3O96018 575 aa12.14□□□□□ -0.47
CCDC90B-208ENST00000527025 EIF4A2Q14240 407 aaKnown RBP12.14□□□□□ -0.47
CCDC90B-208ENST00000527025 SF3B2Q13435 895 aaKnown RBP12.13□□□□□ -0.47
CCDC90B-208ENST00000527025 CNGB1Q14028 1251 aaPredicted RBP12.13□□□□□ -0.47
CCDC90B-208ENST00000527025 DDX54Q8TDD1 881 aaKnown RBP12.13□□□□□ -0.47
CCDC90B-208ENST00000527025 PROM2Q8N271 834 aa12.12□□□□□ -0.47
CCDC90B-208ENST00000527025 BAG6P46379 1132 aa12.11□□□□□ -0.47
CCDC90B-208ENST00000527025 ZCRB1Q8TBF4 217 aaKnown RBP12.11□□□□□ -0.47
CCDC90B-208ENST00000527025 ACSBG1Q96GR2 724 aa12.11□□□□□ -0.47
CCDC90B-208ENST00000527025 BCL11BQ9C0K0 894 aaPredicted RBP12.11□□□□□ -0.47
CCDC90B-208ENST00000527025 NHSQ6T4R5 1651 aa12.1□□□□□ -0.47
CCDC90B-208ENST00000527025 RREB1Q92766 1687 aa12.1□□□□□ -0.47
CCDC90B-208ENST00000527025 MTHFSP49914 203 aa12.1□□□□□ -0.47
CCDC90B-208ENST00000527025 NUP188Q5SRE5 1749 aa12.09□□□□□ -0.47
CCDC90B-208ENST00000527025 NPC1L1Q9UHC9 1359 aa12.09□□□□□ -0.47
CCDC90B-208ENST00000527025 CYP27B1O15528 508 aa12.09□□□□□ -0.47
CCDC90B-208ENST00000527025 IL13P35225 146 aa12.09□□□□□ -0.47
CCDC90B-208ENST00000527025 AEBP1Q8IUX7 1158 aa12.09□□□□□ -0.47
CCDC90B-208ENST00000527025 PKD1L3Q7Z443 1732 aa12.08□□□□□ -0.47
CCDC90B-208ENST00000527025 KAT6BQ8WYB5 2073 aa12.08□□□□□ -0.48
CCDC90B-208ENST00000527025 RAPGEF4Q8WZA2 1011 aa12.08□□□□□ -0.48
CCDC90B-208ENST00000527025 BTAF1O14981 1849 aa12.08□□□□□ -0.48
CCDC90B-208ENST00000527025 DOT1LQ8TEK3 1739 aa12.08□□□□□ -0.48
CCDC90B-208ENST00000527025 IGSF1Q8N6C5 1336 aa12.08□□□□□ -0.48
CCDC90B-208ENST00000527025 PSDA5PKW4 1024 aaPredicted RBP12.07□□□□□ -0.48
CCDC90B-208ENST00000527025 PLSCR1O15162 318 aa12.07□□□□□ -0.48
CCDC90B-208ENST00000527025 TATP17735 454 aaPredicted RBP12.07□□□□□ -0.48
CCDC90B-208ENST00000527025 TOGARAM1Q9Y4F4 1720 aa12.07□□□□□ -0.48
CCDC90B-208ENST00000527025 PRIM1P49642 420 aaKnown RBP12.06□□□□□ -0.48
CCDC90B-208ENST00000527025 COL3A1P02461 1466 aaPredicted RBP12.06□□□□□ -0.48
CCDC90B-208ENST00000527025 RGPD3A6NKT7 1758 aaPredicted RBP12.05□□□□□ -0.48
CCDC90B-208ENST00000527025 RGPD4Q7Z3J3 1758 aa12.05□□□□□ -0.48
CCDC90B-208ENST00000527025 R3HDM1Q15032 1099 aaKnown RBP12.04□□□□□ -0.48
CCDC90B-208ENST00000527025 ITGB4P16144 1822 aa12.04□□□□□ -0.48
CCDC90B-208ENST00000527025 PARD3Q8TEW0 1356 aa12.04□□□□□ -0.48
CCDC90B-208ENST00000527025 PPP2R1AP30153 589 aa12.03□□□□□ -0.48
CCDC90B-208ENST00000527025 KCNQ4P56696 695 aa12.03□□□□□ -0.48
CCDC90B-208ENST00000527025 DDX10Q13206 875 aaKnown RBP12.03□□□□□ -0.48
CCDC90B-208ENST00000527025 NKX1-1Q15270 411 aaPredicted RBP12.03□□□□□ -0.48
CCDC90B-208ENST00000527025 TXNRD1Q16881 649 aa12.03□□□□□ -0.48
CCDC90B-208ENST00000527025 SULT6B1Q6IMI4 303 aa12.03□□□□□ -0.48
CCDC90B-208ENST00000527025 ANO8Q9HCE9 1232 aaPredicted RBP12.03□□□□□ -0.48
CCDC90B-208ENST00000527025 LRRC4BQ9NT99 713 aa12.03□□□□□ -0.48
CCDC90B-208ENST00000527025 FARP1Q9Y4F1 1045 aaPredicted RBP12.03□□□□□ -0.48
CCDC90B-208ENST00000527025 KDRP35968 1356 aa12.03□□□□□ -0.48
CCDC90B-208ENST00000527025 SYTL4Q96C24 671 aaPredicted RBP12.02□□□□□ -0.49
CCDC90B-208ENST00000527025 PDGFDQ9GZP0 370 aaPredicted RBP12.02□□□□□ -0.49
CCDC90B-208ENST00000527025 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.02□□□□□ -0.49
CCDC90B-208ENST00000527025 PCDH11XQ9BZA7 1347 aa12.02□□□□□ -0.49
CCDC90B-208ENST00000527025 PCDH11YQ9BZA8 1340 aa12.02□□□□□ -0.49
CCDC90B-208ENST00000527025 HMOX1P09601 288 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms