RNA–Protein interactions for RNA: ENST00000526645.5

CTSB-212, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-212ENST00000526645 CCNL1Q9UK58 526 aaPredicted RBP15.46■□□□□ 0.07
CTSB-212ENST00000526645 C5P01031 1676 aa15.46■□□□□ 0.07
CTSB-212ENST00000526645 ROCK2O75116 1388 aaKnown RBP15.46■□□□□ 0.07
CTSB-212ENST00000526645 CD163L1Q9NR16 1453 aa15.46■□□□□ 0.06
CTSB-212ENST00000526645 MSH5O43196 834 aa15.45■□□□□ 0.06
CTSB-212ENST00000526645 PRIM1P49642 420 aaKnown RBP15.45■□□□□ 0.06
CTSB-212ENST00000526645 NME9Q86XW9 330 aa15.45■□□□□ 0.06
CTSB-212ENST00000526645 USP47Q96K76 1375 aa15.45■□□□□ 0.06
CTSB-212ENST00000526645 COL23A1Q86Y22 540 aaPredicted RBP15.44■□□□□ 0.06
CTSB-212ENST00000526645 FLAD1Q8NFF5 587 aa15.44■□□□□ 0.06
CTSB-212ENST00000526645 KCNQ4P56696 695 aa15.43■□□□□ 0.06
CTSB-212ENST00000526645 HDGFL2Q7Z4V5 671 aaPredicted RBP15.43■□□□□ 0.06
CTSB-212ENST00000526645 IP6K1Q92551 441 aa15.43■□□□□ 0.06
CTSB-212ENST00000526645 NSD3Q9BZ95 1437 aa15.41■□□□□ 0.06
CTSB-212ENST00000526645 CICQ96RK0 1608 aaPredicted RBP15.4■□□□□ 0.06
CTSB-212ENST00000526645 MEGF6O75095 1541 aa15.4■□□□□ 0.06
CTSB-212ENST00000526645 MSL1Q68DK7 614 aa15.4■□□□□ 0.06
CTSB-212ENST00000526645 ZCRB1Q8TBF4 217 aaKnown RBP15.4■□□□□ 0.06
CTSB-212ENST00000526645 L3MBTL2Q969R5 705 aa15.4■□□□□ 0.06
CTSB-212ENST00000526645 TAF1LQ8IZX4 1826 aa15.4■□□□□ 0.06
CTSB-212ENST00000526645 CGNL1Q0VF96 1302 aa15.4■□□□□ 0.06
CTSB-212ENST00000526645 ZNF526Q8TF50 670 aaPredicted RBP15.39■□□□□ 0.05
CTSB-212ENST00000526645 TERF2IPQ9NYB0 399 aa15.39■□□□□ 0.05
CTSB-212ENST00000526645 APLP1P51693 650 aa15.38■□□□□ 0.05
CTSB-212ENST00000526645 A0A1W2PP64 1363 aa15.37■□□□□ 0.05
CTSB-212ENST00000526645 RTL1A6NKG5 1358 aa15.37■□□□□ 0.05
CTSB-212ENST00000526645 LTV1Q96GA3 475 aaPredicted RBP15.37■□□□□ 0.05
CTSB-212ENST00000526645 IGSF1Q8N6C5 1336 aa15.37■□□□□ 0.05
CTSB-212ENST00000526645 C4BP0C0L5 1744 aa15.37■□□□□ 0.05
CTSB-212ENST00000526645 KIF3CO14782 793 aa15.36■□□□□ 0.05
CTSB-212ENST00000526645 TMC1Q8TDI8 760 aa15.36■□□□□ 0.05
CTSB-212ENST00000526645 PALLDQ8WX93 1383 aa15.36■□□□□ 0.05
CTSB-212ENST00000526645 RGPD2P0DJD1 1756 aa15.35■□□□□ 0.05
CTSB-212ENST00000526645 SMG6Q86US8 1419 aaKnown RBP15.34■□□□□ 0.05
CTSB-212ENST00000526645 TOGARAM1Q9Y4F4 1720 aa15.34■□□□□ 0.05
CTSB-212ENST00000526645 HOXC9P31274 260 aa15.34■□□□□ 0.05
CTSB-212ENST00000526645 PUS7Q96PZ0 661 aaKnown RBP15.34■□□□□ 0.05
CTSB-212ENST00000526645 MAP3K19Q56UN5 1328 aa15.34■□□□□ 0.05
CTSB-212ENST00000526645 UBR3Q6ZT12 1888 aa15.33■□□□□ 0.05
CTSB-212ENST00000526645 AMPHP49418 695 aa15.33■□□□□ 0.04
CTSB-212ENST00000526645 COG3Q96JB2 828 aa15.33■□□□□ 0.04
CTSB-212ENST00000526645 AK7Q96M32 723 aa15.33■□□□□ 0.04
CTSB-212ENST00000526645 PCDH11XQ9BZA7 1347 aa15.33■□□□□ 0.04
CTSB-212ENST00000526645 PCDH11YQ9BZA8 1340 aa15.33■□□□□ 0.04
CTSB-212ENST00000526645 TOMM70O94826 608 aa15.32■□□□□ 0.04
CTSB-212ENST00000526645 RAPGEF4Q8WZA2 1011 aa15.32■□□□□ 0.04
CTSB-212ENST00000526645 SLC12A5Q9H2X9 1139 aa15.32■□□□□ 0.04
CTSB-212ENST00000526645 SMARCC1Q92922 1105 aaPredicted RBP15.31■□□□□ 0.04
CTSB-212ENST00000526645 WDR90Q96KV7 1748 aa15.31■□□□□ 0.04
CTSB-212ENST00000526645 SSFA2P28290 1259 aa15.3■□□□□ 0.04
CTSB-212ENST00000526645 KIF13BQ9NQT8 1826 aa15.29■□□□□ 0.04
CTSB-212ENST00000526645 TATP17735 454 aaPredicted RBP15.29■□□□□ 0.04
CTSB-212ENST00000526645 DNAJC5GQ8N7S2 189 aa15.28■□□□□ 0.04
CTSB-212ENST00000526645 ITGB4P16144 1822 aa15.28■□□□□ 0.04
CTSB-212ENST00000526645 PKD1L3Q7Z443 1732 aa15.27■□□□□ 0.04
CTSB-212ENST00000526645 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.27■□□□□ 0.04
CTSB-212ENST00000526645 NBPF6Q5VWK0 638 aa15.27■□□□□ 0.04
CTSB-212ENST00000526645 NBPF4Q96M43 638 aa15.27■□□□□ 0.04
CTSB-212ENST00000526645 CARD11Q9BXL7 1154 aa15.27■□□□□ 0.04
CTSB-212ENST00000526645 PXDNLA1KZ92 1463 aa15.27■□□□□ 0.03
CTSB-212ENST00000526645 KIAA1551Q9HCM1 1747 aa15.26■□□□□ 0.03
CTSB-212ENST00000526645 MPRIPQ6WCQ1 1025 aa15.26■□□□□ 0.03
CTSB-212ENST00000526645 KIF24Q5T7B8 1368 aa15.25■□□□□ 0.03
CTSB-212ENST00000526645 PLEKHG2Q9H7P9 1386 aa15.25■□□□□ 0.03
CTSB-212ENST00000526645 MAP2P11137 1827 aaKnown RBP15.25■□□□□ 0.03
CTSB-212ENST00000526645 PHF14O94880 888 aa15.25■□□□□ 0.03
CTSB-212ENST00000526645 WWC3Q9ULE0 1092 aa15.25■□□□□ 0.03
CTSB-212ENST00000526645 INSRP06213 1382 aa15.24■□□□□ 0.03
CTSB-212ENST00000526645 RBM46Q8TBY0 533 aaKnown RBP15.24■□□□□ 0.03
CTSB-212ENST00000526645 SLC24A1O60721 1099 aa15.23■□□□□ 0.03
CTSB-212ENST00000526645 TGFB2P61812 414 aa15.23■□□□□ 0.03
CTSB-212ENST00000526645 AMIGO3Q86WK7 504 aa15.23■□□□□ 0.03
CTSB-212ENST00000526645 USHBP1Q8N6Y0 703 aa15.23■□□□□ 0.03
CTSB-212ENST00000526645 JMYQ8N9B5 988 aa15.23■□□□□ 0.03
CTSB-212ENST00000526645 FLT4P35916 1363 aa15.23■□□□□ 0.03
CTSB-212ENST00000526645 KLRG1Q96E93 195 aa15.22■□□□□ 0.03
CTSB-212ENST00000526645 C10orf71Q711Q0 1435 aa15.22■□□□□ 0.03
CTSB-212ENST00000526645 LOC102724428A0A0B4J2F2 783 aa15.21■□□□□ 0.03
CTSB-212ENST00000526645 CYP27B1O15528 508 aa15.21■□□□□ 0.03
CTSB-212ENST00000526645 SIK1P57059 783 aa15.21■□□□□ 0.03
CTSB-212ENST00000526645 FSTL1Q12841 308 aa15.21■□□□□ 0.03
CTSB-212ENST00000526645 RRS1Q15050 365 aaKnown RBP15.21■□□□□ 0.03
CTSB-212ENST00000526645 C16orf71Q8IYS4 520 aaPredicted RBP15.21■□□□□ 0.03
CTSB-212ENST00000526645 SIN3AQ96ST3 1273 aa15.21■□□□□ 0.03
CTSB-212ENST00000526645 N4BP2Q86UW6 1770 aaPredicted RBP15.21■□□□□ 0.02
CTSB-212ENST00000526645 MMP10P09238 476 aa15.2■□□□□ 0.02
CTSB-212ENST00000526645 FBLN1P23142 703 aa15.2■□□□□ 0.02
CTSB-212ENST00000526645 NMRK2Q9NPI5 230 aa15.2■□□□□ 0.02
CTSB-212ENST00000526645 BCS1LQ9Y276 419 aa15.2■□□□□ 0.02
CTSB-212ENST00000526645 BRCA1P38398 1863 aaKnown RBP15.2■□□□□ 0.02
CTSB-212ENST00000526645 NCAPD2Q15021 1401 aa15.19■□□□□ 0.02
CTSB-212ENST00000526645 GNPATO15228 680 aa15.19■□□□□ 0.02
CTSB-212ENST00000526645 NEUROD1Q13562 356 aa15.19■□□□□ 0.02
CTSB-212ENST00000526645 NKX1-1Q15270 411 aaPredicted RBP15.19■□□□□ 0.02
CTSB-212ENST00000526645 LINC00116Q8NCU8 138 aa15.19■□□□□ 0.02
CTSB-212ENST00000526645 PIGBQ92521 554 aa15.19■□□□□ 0.02
CTSB-212ENST00000526645 KIF20BQ96Q89 1820 aa15.19■□□□□ 0.02
CTSB-212ENST00000526645 ARFGEF1Q9Y6D6 1849 aa15.19■□□□□ 0.02
CTSB-212ENST00000526645 ZNF831Q5JPB2 1677 aa15.19■□□□□ 0.02
CTSB-212ENST00000526645 TNRC6CQ9HCJ0 1690 aaKnown RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 131.3 ms