RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 TONSLQ96HA7 1378 aa15.56■□□□□ 0.08
NEDD8-204ENST00000526430 TOMM70O94826 608 aa15.55■□□□□ 0.08
NEDD8-204ENST00000526430 CABP2Q9NPB3 220 aa15.55■□□□□ 0.08
NEDD8-204ENST00000526430 CABP1Q9NZU7 370 aa15.55■□□□□ 0.08
NEDD8-204ENST00000526430 TTC21AQ8NDW8 1320 aa15.54■□□□□ 0.08
NEDD8-204ENST00000526430 KIF13BQ9NQT8 1826 aa15.54■□□□□ 0.08
NEDD8-204ENST00000526430 UBR3Q6ZT12 1888 aa15.53■□□□□ 0.08
NEDD8-204ENST00000526430 CAPN15O75808 1086 aa15.53■□□□□ 0.08
NEDD8-204ENST00000526430 COL23A1Q86Y22 540 aaPredicted RBP15.53■□□□□ 0.08
NEDD8-204ENST00000526430 TNS4Q8IZW8 715 aa15.53■□□□□ 0.08
NEDD8-204ENST00000526430 NSD2O96028 1365 aa15.52■□□□□ 0.08
NEDD8-204ENST00000526430 ANKRD36BQ8N2N9 1353 aa15.52■□□□□ 0.08
NEDD8-204ENST00000526430 TTC21BQ7Z4L5 1316 aa15.52■□□□□ 0.08
NEDD8-204ENST00000526430 CENPJQ9HC77 1338 aaPredicted RBP15.52■□□□□ 0.08
NEDD8-204ENST00000526430 KCNQ4P56696 695 aa15.51■□□□□ 0.07
NEDD8-204ENST00000526430 KLRG1Q96E93 195 aa15.51■□□□□ 0.07
NEDD8-204ENST00000526430 ZNF692Q9BU19 519 aaPredicted RBP15.51■□□□□ 0.07
NEDD8-204ENST00000526430 NLRP2Q9NX02 1062 aa15.51■□□□□ 0.07
NEDD8-204ENST00000526430 TOGARAM1Q9Y4F4 1720 aa15.51■□□□□ 0.07
NEDD8-204ENST00000526430 KIAA1551Q9HCM1 1747 aa15.5■□□□□ 0.07
NEDD8-204ENST00000526430 BRCA1P38398 1863 aaKnown RBP15.5■□□□□ 0.07
NEDD8-204ENST00000526430 IGSF1Q8N6C5 1336 aa15.49■□□□□ 0.07
NEDD8-204ENST00000526430 SOX12O15370 315 aa15.49■□□□□ 0.07
NEDD8-204ENST00000526430 MSH5O43196 834 aa15.49■□□□□ 0.07
NEDD8-204ENST00000526430 SLC34A2O95436 690 aa15.49■□□□□ 0.07
NEDD8-204ENST00000526430 MSL1Q68DK7 614 aa15.49■□□□□ 0.07
NEDD8-204ENST00000526430 CCNL1Q9UK58 526 aaPredicted RBP15.49■□□□□ 0.07
NEDD8-204ENST00000526430 FLAD1Q8NFF5 587 aa15.48■□□□□ 0.07
NEDD8-204ENST00000526430 PKD1L3Q7Z443 1732 aa15.48■□□□□ 0.07
NEDD8-204ENST00000526430 RGPD2P0DJD1 1756 aa15.47■□□□□ 0.07
NEDD8-204ENST00000526430 C4BP0C0L5 1744 aa15.47■□□□□ 0.07
NEDD8-204ENST00000526430 HMGB2P26583 209 aaKnown RBP15.47■□□□□ 0.07
NEDD8-204ENST00000526430 ARFGEF1Q9Y6D6 1849 aa15.47■□□□□ 0.07
NEDD8-204ENST00000526430 USP31Q70CQ4 1352 aa15.47■□□□□ 0.07
NEDD8-204ENST00000526430 N4BP2Q86UW6 1770 aaPredicted RBP15.47■□□□□ 0.07
NEDD8-204ENST00000526430 RBM46Q8TBY0 533 aaKnown RBP15.46■□□□□ 0.07
NEDD8-204ENST00000526430 TNRC6CQ9HCJ0 1690 aaKnown RBP15.46■□□□□ 0.07
NEDD8-204ENST00000526430 PRIM1P49642 420 aaKnown RBP15.45■□□□□ 0.06
NEDD8-204ENST00000526430 DDX54Q8TDD1 881 aaKnown RBP15.44■□□□□ 0.06
NEDD8-204ENST00000526430 ANKRD24Q8TF21 1146 aa15.44■□□□□ 0.06
NEDD8-204ENST00000526430 SYTL4Q96C24 671 aaPredicted RBP15.44■□□□□ 0.06
NEDD8-204ENST00000526430 ITGB4P16144 1822 aa15.44■□□□□ 0.06
NEDD8-204ENST00000526430 USP47Q96K76 1375 aa15.43■□□□□ 0.06
NEDD8-204ENST00000526430 EVC2Q86UK5 1308 aa15.43■□□□□ 0.06
NEDD8-204ENST00000526430 KTN1Q86UP2 1357 aaKnown RBP15.42■□□□□ 0.06
NEDD8-204ENST00000526430 FSTL1Q12841 308 aa15.42■□□□□ 0.06
NEDD8-204ENST00000526430 C10orf71Q711Q0 1435 aa15.42■□□□□ 0.06
NEDD8-204ENST00000526430 NMRK2Q9NPI5 230 aa15.41■□□□□ 0.06
NEDD8-204ENST00000526430 SBF1O95248 1867 aa15.41■□□□□ 0.06
NEDD8-204ENST00000526430 NSD3Q9BZ95 1437 aa15.4■□□□□ 0.06
NEDD8-204ENST00000526430 ROCK2O75116 1388 aaKnown RBP15.39■□□□□ 0.05
NEDD8-204ENST00000526430 MAP2P11137 1827 aaKnown RBP15.39■□□□□ 0.05
NEDD8-204ENST00000526430 HTRA3P83110 453 aa15.39■□□□□ 0.05
NEDD8-204ENST00000526430 PLEKHG2Q9H7P9 1386 aa15.38■□□□□ 0.05
NEDD8-204ENST00000526430 WWC3Q9ULE0 1092 aa15.38■□□□□ 0.05
NEDD8-204ENST00000526430 PXDNLA1KZ92 1463 aa15.38■□□□□ 0.05
NEDD8-204ENST00000526430 C16orf71Q8IYS4 520 aaPredicted RBP15.36■□□□□ 0.05
NEDD8-204ENST00000526430 CARD11Q9BXL7 1154 aa15.36■□□□□ 0.05
NEDD8-204ENST00000526430 MEGF6O75095 1541 aa15.36■□□□□ 0.05
NEDD8-204ENST00000526430 ZCRB1Q8TBF4 217 aaKnown RBP15.35■□□□□ 0.05
NEDD8-204ENST00000526430 SBNO2Q9Y2G9 1366 aa15.35■□□□□ 0.05
NEDD8-204ENST00000526430 IP6K1Q92551 441 aa15.34■□□□□ 0.05
NEDD8-204ENST00000526430 PCDH10Q9P2E7 1040 aa15.34■□□□□ 0.05
NEDD8-204ENST00000526430 PALLDQ8WX93 1383 aa15.34■□□□□ 0.05
NEDD8-204ENST00000526430 CD163L1Q9NR16 1453 aa15.33■□□□□ 0.05
NEDD8-204ENST00000526430 HSPA1AP0DMV8 641 aaKnown RBP15.33■□□□□ 0.04
NEDD8-204ENST00000526430 HSPA1BP0DMV9 641 aaKnown RBP15.33■□□□□ 0.04
NEDD8-204ENST00000526430 SSFA2P28290 1259 aa15.32■□□□□ 0.04
NEDD8-204ENST00000526430 TGFB2P61812 414 aa15.32■□□□□ 0.04
NEDD8-204ENST00000526430 NME9Q86XW9 330 aa15.32■□□□□ 0.04
NEDD8-204ENST00000526430 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.32■□□□□ 0.04
NEDD8-204ENST00000526430 AK7Q96M32 723 aa15.32■□□□□ 0.04
NEDD8-204ENST00000526430 CGNL1Q0VF96 1302 aa15.32■□□□□ 0.04
NEDD8-204ENST00000526430 KCPQ6ZWJ8 1503 aa15.32■□□□□ 0.04
NEDD8-204ENST00000526430 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.31■□□□□ 0.04
NEDD8-204ENST00000526430 AMIGO3Q86WK7 504 aa15.31■□□□□ 0.04
NEDD8-204ENST00000526430 TESK2Q96S53 571 aa15.31■□□□□ 0.04
NEDD8-204ENST00000526430 KDM2BQ8NHM5 1336 aa15.31■□□□□ 0.04
NEDD8-204ENST00000526430 EDC4Q6P2E9 1401 aaKnown RBP15.31■□□□□ 0.04
NEDD8-204ENST00000526430 ST20-MTHFSA0A0A6YYL1 179 aa15.3■□□□□ 0.04
NEDD8-204ENST00000526430 C4AP0C0L4 1744 aa15.3■□□□□ 0.04
NEDD8-204ENST00000526430 SMC1BQ8NDV3 1235 aa15.29■□□□□ 0.04
NEDD8-204ENST00000526430 BCS1LQ9Y276 419 aa15.29■□□□□ 0.04
NEDD8-204ENST00000526430 ARHGAP27Q6ZUM4 889 aa15.28■□□□□ 0.04
NEDD8-204ENST00000526430 CCDC88AQ3V6T2 1871 aa15.28■□□□□ 0.04
NEDD8-204ENST00000526430 PHF14O94880 888 aa15.27■□□□□ 0.04
NEDD8-204ENST00000526430 C9orf131Q5VYM1 1079 aa15.27■□□□□ 0.04
NEDD8-204ENST00000526430 SMARCC1Q92922 1105 aaPredicted RBP15.27■□□□□ 0.04
NEDD8-204ENST00000526430 ZNF831Q5JPB2 1677 aa15.27■□□□□ 0.03
NEDD8-204ENST00000526430 LTV1Q96GA3 475 aaPredicted RBP15.26■□□□□ 0.03
NEDD8-204ENST00000526430 MMP10P09238 476 aa15.25■□□□□ 0.03
NEDD8-204ENST00000526430 HSPA5P11021 654 aaKnown RBP15.25■□□□□ 0.03
NEDD8-204ENST00000526430 PCDH11XQ9BZA7 1347 aa15.24■□□□□ 0.03
NEDD8-204ENST00000526430 PCDH11YQ9BZA8 1340 aa15.24■□□□□ 0.03
NEDD8-204ENST00000526430 COL5A3P25940 1745 aaPredicted RBP15.24■□□□□ 0.03
NEDD8-204ENST00000526430 TIAM2Q8IVF5 1701 aa15.24■□□□□ 0.03
NEDD8-204ENST00000526430 A0A0G2JLW4 131 aa15.24■□□□□ 0.03
NEDD8-204ENST00000526430 HOXC9P31274 260 aa15.24■□□□□ 0.03
NEDD8-204ENST00000526430 RTL1A6NKG5 1358 aa15.24■□□□□ 0.03
NEDD8-204ENST00000526430 FCHSD2O94868 740 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms