RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 RELBQ01201 579 aa9.11□□□□□ -0.95
SVIP-202ENST00000525670 PCDHB9Q9Y5E1 797 aa9.1□□□□□ -0.95
SVIP-202ENST00000525670 MRC2Q9UBG0 1479 aa9.09□□□□□ -0.95
SVIP-202ENST00000525670 APBB1O00213 710 aa9.09□□□□□ -0.95
SVIP-202ENST00000525670 ADD1P35611 737 aaKnown RBP9.09□□□□□ -0.95
SVIP-202ENST00000525670 MCCD1P59942 119 aaPredicted RBP9.09□□□□□ -0.95
SVIP-202ENST00000525670 CCDC125Q86Z20 511 aa9.09□□□□□ -0.95
SVIP-202ENST00000525670 MTMR14Q8NCE2 650 aa9.09□□□□□ -0.95
SVIP-202ENST00000525670 INSM2Q96T92 566 aaPredicted RBP9.09□□□□□ -0.95
SVIP-202ENST00000525670 GIGYF1O75420 1035 aaPredicted RBP9.08□□□□□ -0.96
SVIP-202ENST00000525670 ADH1AP07327 375 aa9.08□□□□□ -0.96
SVIP-202ENST00000525670 CTSOP43234 321 aaPredicted RBP9.08□□□□□ -0.96
SVIP-202ENST00000525670 PTSQ03393 145 aa9.08□□□□□ -0.96
SVIP-202ENST00000525670 NR1H3Q13133 447 aa9.08□□□□□ -0.96
SVIP-202ENST00000525670 ZNF395Q9H8N7 513 aaPredicted RBP9.08□□□□□ -0.96
SVIP-202ENST00000525670 SNRKQ9NRH2 765 aa9.08□□□□□ -0.96
SVIP-202ENST00000525670 PTGIRP43119 386 aa9.07□□□□□ -0.96
SVIP-202ENST00000525670 ZSCAN1Q8NBB4 408 aa9.07□□□□□ -0.96
SVIP-202ENST00000525670 ZNF592Q92610 1267 aa9.07□□□□□ -0.96
SVIP-202ENST00000525670 NDUFB9Q9Y6M9 179 aa9.07□□□□□ -0.96
SVIP-202ENST00000525670 LORP23490 312 aaPredicted RBP9.06□□□□□ -0.96
SVIP-202ENST00000525670 RNF20Q5VTR2 975 aa9.06□□□□□ -0.96
SVIP-202ENST00000525670 KDF1Q8NAX2 398 aaPredicted RBP9.06□□□□□ -0.96
SVIP-202ENST00000525670 POLMQ9NP87 494 aaPredicted RBP9.06□□□□□ -0.96
SVIP-202ENST00000525670 ZNF330Q9Y3S2 320 aaPredicted RBP9.06□□□□□ -0.96
SVIP-202ENST00000525670 CUX2O14529 1486 aa9.06□□□□□ -0.96
SVIP-202ENST00000525670 WDR62O43379 1518 aa9.05□□□□□ -0.96
SVIP-202ENST00000525670 URB2Q14146 1524 aaKnown RBP9.05□□□□□ -0.96
SVIP-202ENST00000525670 FAM181BA6NEQ2 426 aa9.05□□□□□ -0.96
SVIP-202ENST00000525670 GPR37L1O60883 481 aa9.05□□□□□ -0.96
SVIP-202ENST00000525670 CYLDQ9NQC7 956 aa9.05□□□□□ -0.96
SVIP-202ENST00000525670 SLC35F4A4IF30 521 aa9.04□□□□□ -0.96
SVIP-202ENST00000525670 CCDC155Q8N6L0 562 aa9.04□□□□□ -0.96
SVIP-202ENST00000525670 RNF217Q8TC41 542 aa9.04□□□□□ -0.96
SVIP-202ENST00000525670 NANOS1Q8WY41 292 aaKnown RBP9.02□□□□□ -0.97
SVIP-202ENST00000525670 ATP5J2-PTCD1G3V325 749 aa9.01□□□□□ -0.97
SVIP-202ENST00000525670 RNF144AP50876 292 aaPredicted RBP9□□□□□ -0.97
SVIP-202ENST00000525670 ERVK-9P63128 1117 aa9□□□□□ -0.97
SVIP-202ENST00000525670 FOXD4L5Q5VV16 416 aaPredicted RBP9□□□□□ -0.97
SVIP-202ENST00000525670 CC2D2BQ6DHV5 1058 aa9□□□□□ -0.97
SVIP-202ENST00000525670 GPR161Q8N6U8 529 aaKnown RBP9□□□□□ -0.97
SVIP-202ENST00000525670 PRM3Q9NNZ6 103 aa9□□□□□ -0.97
SVIP-202ENST00000525670 ITGA6P23229 1130 aa8.99□□□□□ -0.97
SVIP-202ENST00000525670 TOPBP1Q92547 1522 aa8.99□□□□□ -0.97
SVIP-202ENST00000525670 ABCC8Q09428 1581 aa8.99□□□□□ -0.97
SVIP-202ENST00000525670 DNMBPQ6XZF7 1577 aa8.99□□□□□ -0.97
SVIP-202ENST00000525670 LYSMD3Q7Z3D4 306 aa8.98□□□□□ -0.97
SVIP-202ENST00000525670 SENP3-EIF4A1A0A087X0R7 540 aa8.97□□□□□ -0.97
SVIP-202ENST00000525670 GPC1P35052 558 aa8.97□□□□□ -0.97
SVIP-202ENST00000525670 CEP126Q9P2H0 1117 aa8.97□□□□□ -0.97
SVIP-202ENST00000525670 PCDHB11Q9Y5F2 797 aa8.97□□□□□ -0.97
SVIP-202ENST00000525670 A0A1W2PRU2 124 aa8.96□□□□□ -0.98
SVIP-202ENST00000525670 VWA5B2Q8N398 1253 aa8.96□□□□□ -0.98
SVIP-202ENST00000525670 ESF1Q9H501 851 aaKnown RBP8.96□□□□□ -0.98
SVIP-202ENST00000525670 TBC1D2BQ9UPU7 963 aa8.96□□□□□ -0.98
SVIP-202ENST00000525670 CUX1P39880 1505 aa8.95□□□□□ -0.98
SVIP-202ENST00000525670 MEN1O00255 615 aa8.95□□□□□ -0.98
SVIP-202ENST00000525670 SCTRP47872 440 aa8.95□□□□□ -0.98
SVIP-202ENST00000525670 SV2AQ7L0J3 742 aa8.95□□□□□ -0.98
SVIP-202ENST00000525670 PRICKLE2Q7Z3G6 844 aa8.95□□□□□ -0.98
SVIP-202ENST00000525670 CYP2U1Q7Z449 544 aa8.95□□□□□ -0.98
SVIP-202ENST00000525670 COL25A1Q9BXS0 654 aaPredicted RBP8.95□□□□□ -0.98
SVIP-202ENST00000525670 PRKCSHP14314 528 aaPredicted RBP8.94□□□□□ -0.98
SVIP-202ENST00000525670 KRT76Q01546 638 aa8.94□□□□□ -0.98
SVIP-202ENST00000525670 CNTNAP3BQ96NU0 1288 aa8.94□□□□□ -0.98
SVIP-202ENST00000525670 CNTNAP3Q9BZ76 1288 aa8.94□□□□□ -0.98
SVIP-202ENST00000525670 CDC14CA4D256 554 aa8.93□□□□□ -0.98
SVIP-202ENST00000525670 TRAK2O60296 914 aa8.93□□□□□ -0.98
SVIP-202ENST00000525670 EIF4G2P78344 907 aaKnown RBP eCLIP8.93□□□□□ -0.98
SVIP-202ENST00000525670 NLRP3Q96P20 1036 aa8.93□□□□□ -0.98
SVIP-202ENST00000525670 OSBPL3Q9H4L5 887 aa8.93□□□□□ -0.98
SVIP-202ENST00000525670 FGD5Q6ZNL6 1462 aa8.93□□□□□ -0.98
SVIP-202ENST00000525670 ZNF608Q9ULD9 1512 aaPredicted RBP8.93□□□□□ -0.98
SVIP-202ENST00000525670 SYNJ1O43426 1573 aa8.93□□□□□ -0.98
SVIP-202ENST00000525670 POLA1P09884 1462 aaPredicted RBP8.92□□□□□ -0.98
SVIP-202ENST00000525670 RAD54L2Q9Y4B4 1467 aa8.92□□□□□ -0.98
SVIP-202ENST00000525670 CLN3Q13286 438 aa8.92□□□□□ -0.98
SVIP-202ENST00000525670 IRF5Q13568 498 aa8.92□□□□□ -0.98
SVIP-202ENST00000525670 EIF4G3O43432 1585 aaKnown RBP8.91□□□□□ -0.98
SVIP-202ENST00000525670 RHOQP17081 205 aa8.91□□□□□ -0.98
SVIP-202ENST00000525670 SLC27A3Q5K4L6 730 aa8.91□□□□□ -0.98
SVIP-202ENST00000525670 GRIP2Q9C0E4 1043 aa8.91□□□□□ -0.98
SVIP-202ENST00000525670 MYCP01106 439 aaPredicted RBP8.9□□□□□ -0.98
SVIP-202ENST00000525670 GNRH1P01148 92 aa8.9□□□□□ -0.98
SVIP-202ENST00000525670 RNFT1Q5M7Z0 435 aa8.9□□□□□ -0.98
SVIP-202ENST00000525670 CCDC85AQ96PX6 553 aaPredicted RBP8.9□□□□□ -0.98
SVIP-202ENST00000525670 PHTF2Q8N3S3 785 aa8.89□□□□□ -0.99
SVIP-202ENST00000525670 GMCL1Q96IK5 515 aa8.89□□□□□ -0.99
SVIP-202ENST00000525670 CDCA7Q9BWT1 371 aaPredicted RBP8.89□□□□□ -0.99
SVIP-202ENST00000525670 GDPD2Q9HCC8 539 aa8.89□□□□□ -0.99
SVIP-202ENST00000525670 TARBP1Q13395 1621 aaKnown RBP8.89□□□□□ -0.99
SVIP-202ENST00000525670 IFT140Q96RY7 1462 aa8.89□□□□□ -0.99
SVIP-202ENST00000525670 POU4F2Q12837 409 aa8.88□□□□□ -0.99
SVIP-202ENST00000525670 ARHGEF10LQ9HCE6 1279 aa8.88□□□□□ -0.99
SVIP-202ENST00000525670 CUEDC1Q9NWM3 386 aaPredicted RBP8.88□□□□□ -0.99
SVIP-202ENST00000525670 WRNQ14191 1432 aaPredicted RBP eCLIP8.88□□□□□ -0.99
SVIP-202ENST00000525670 SPATA31C2B4DYI2 1134 aa8.87□□□□□ -0.99
SVIP-202ENST00000525670 SLURP2P0DP57 97 aa8.87□□□□□ -0.99
SVIP-202ENST00000525670 WASHC4Q2M389 1173 aa8.87□□□□□ -0.99
SVIP-202ENST00000525670 SLFNL1Q499Z3 407 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms