RNA–Protein interactions for RNA: ENST00000525334.5

TSPAN4-215, Transcript of tetraspanin 4, humanhuman

TSL 3

Gene TSPAN4, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-215ENST00000525334 NUP188Q5SRE5 1749 aa25.3■■□□□ 1.64
TSPAN4-215ENST00000525334 PER1O15534 1290 aaPredicted RBP25.3■■□□□ 1.64
TSPAN4-215ENST00000525334 R3HDM1Q15032 1099 aaKnown RBP25.3■■□□□ 1.64
TSPAN4-215ENST00000525334 DDX54Q8TDD1 881 aaKnown RBP25.3■■□□□ 1.64
TSPAN4-215ENST00000525334 RAPGEF4Q8WZA2 1011 aa25.3■■□□□ 1.64
TSPAN4-215ENST00000525334 NCAPD2Q15021 1401 aa25.29■■□□□ 1.64
TSPAN4-215ENST00000525334 KCNQ2O43526 872 aa25.29■■□□□ 1.64
TSPAN4-215ENST00000525334 ZCRB1Q8TBF4 217 aaKnown RBP25.29■■□□□ 1.64
TSPAN4-215ENST00000525334 ACSBG1Q96GR2 724 aa25.29■■□□□ 1.64
TSPAN4-215ENST00000525334 TATP17735 454 aaPredicted RBP25.27■■□□□ 1.64
TSPAN4-215ENST00000525334 EIF4A2Q14240 407 aaKnown RBP25.26■■□□□ 1.63
TSPAN4-215ENST00000525334 EYA1Q99502 592 aa25.26■■□□□ 1.63
TSPAN4-215ENST00000525334 NBPF14Q5TI25 921 aa25.25■■□□□ 1.63
TSPAN4-215ENST00000525334 PROM2Q8N271 834 aa25.24■■□□□ 1.63
TSPAN4-215ENST00000525334 DOT1LQ8TEK3 1739 aa25.23■■□□□ 1.63
TSPAN4-215ENST00000525334 BTAF1O14981 1849 aa25.22■■□□□ 1.63
TSPAN4-215ENST00000525334 CC2D1BQ5T0F9 858 aaKnown RBP25.22■■□□□ 1.63
TSPAN4-215ENST00000525334 PKD1L3Q7Z443 1732 aa25.21■■□□□ 1.63
TSPAN4-215ENST00000525334 NPC1L1Q9UHC9 1359 aa25.19■■□□□ 1.62
TSPAN4-215ENST00000525334 KAT6BQ8WYB5 2073 aa25.19■■□□□ 1.62
TSPAN4-215ENST00000525334 PCDH11XQ9BZA7 1347 aa25.19■■□□□ 1.62
TSPAN4-215ENST00000525334 PCDH11YQ9BZA8 1340 aa25.19■■□□□ 1.62
TSPAN4-215ENST00000525334 IGSF1Q8N6C5 1336 aa25.17■■□□□ 1.62
TSPAN4-215ENST00000525334 TXNRD1Q16881 649 aa25.16■■□□□ 1.62
TSPAN4-215ENST00000525334 CYP27B1O15528 508 aa25.15■■□□□ 1.62
TSPAN4-215ENST00000525334 PRIM1P49642 420 aaKnown RBP25.15■■□□□ 1.62
TSPAN4-215ENST00000525334 CNGB1Q14028 1251 aaPredicted RBP25.15■■□□□ 1.62
TSPAN4-215ENST00000525334 SYTL4Q96C24 671 aaPredicted RBP25.15■■□□□ 1.62
TSPAN4-215ENST00000525334 MTHFSP49914 203 aa25.13■■□□□ 1.61
TSPAN4-215ENST00000525334 SPG7Q9UQ90 795 aa25.13■■□□□ 1.61
TSPAN4-215ENST00000525334 ANO8Q9HCE9 1232 aaPredicted RBP25.12■■□□□ 1.61
TSPAN4-215ENST00000525334 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.11■■□□□ 1.61
TSPAN4-215ENST00000525334 TOGARAM1Q9Y4F4 1720 aa25.11■■□□□ 1.61
TSPAN4-215ENST00000525334 PLEKHG2Q9H7P9 1386 aa25.1■■□□□ 1.61
TSPAN4-215ENST00000525334 IL13P35225 146 aa25.1■■□□□ 1.61
TSPAN4-215ENST00000525334 LRP5O75197 1615 aa25.1■■□□□ 1.61
TSPAN4-215ENST00000525334 AEBP1Q8IUX7 1158 aa25.08■■□□□ 1.61
TSPAN4-215ENST00000525334 PAPPAQ13219 1627 aa25.07■■□□□ 1.6
TSPAN4-215ENST00000525334 NKX1-1Q15270 411 aaPredicted RBP25.06■■□□□ 1.6
TSPAN4-215ENST00000525334 PHKG2P15735 406 aa25.05■■□□□ 1.6
TSPAN4-215ENST00000525334 SULT6B1Q6IMI4 303 aa25.05■■□□□ 1.6
TSPAN4-215ENST00000525334 KDRP35968 1356 aa25.05■■□□□ 1.6
TSPAN4-215ENST00000525334 LY75O60449 1722 aa25.04■■□□□ 1.6
TSPAN4-215ENST00000525334 SLC15A2Q16348 729 aa25.04■■□□□ 1.6
TSPAN4-215ENST00000525334 IFNL2Q8IZJ0 200 aa25.04■■□□□ 1.6
TSPAN4-215ENST00000525334 LRRC4BQ9NT99 713 aa25.04■■□□□ 1.6
TSPAN4-215ENST00000525334 STK32BQ9NY57 414 aa25.04■■□□□ 1.6
TSPAN4-215ENST00000525334 ITGB4P16144 1822 aa25.04■■□□□ 1.6
TSPAN4-215ENST00000525334 COL3A1P02461 1466 aaPredicted RBP25.03■■□□□ 1.6
TSPAN4-215ENST00000525334 SLC27A3Q5K4L6 730 aa25.02■■□□□ 1.6
TSPAN4-215ENST00000525334 MPRIPQ6WCQ1 1025 aa25.02■■□□□ 1.6
TSPAN4-215ENST00000525334 DIAPH1O60610 1272 aaKnown RBP25.01■■□□□ 1.59
TSPAN4-215ENST00000525334 PLEKHO1Q53GL0 409 aaPredicted RBP25.01■■□□□ 1.59
TSPAN4-215ENST00000525334 SPON1Q9HCB6 807 aa25.01■■□□□ 1.59
TSPAN4-215ENST00000525334 CASZ1Q86V15 1759 aa25■■□□□ 1.59
TSPAN4-215ENST00000525334 PDGFDQ9GZP0 370 aaPredicted RBP25■■□□□ 1.59
TSPAN4-215ENST00000525334 AMOTQ4VCS5 1084 aa24.99■■□□□ 1.59
TSPAN4-215ENST00000525334 KCNQ4P56696 695 aa24.98■■□□□ 1.59
TSPAN4-215ENST00000525334 ZNF530Q6P9A1 599 aaPredicted RBP24.98■■□□□ 1.59
TSPAN4-215ENST00000525334 PALLDQ8WX93 1383 aa24.97■■□□□ 1.59
TSPAN4-215ENST00000525334 HMOX1P09601 288 aa24.97■■□□□ 1.59
TSPAN4-215ENST00000525334 ZNF827Q17R98 1081 aa24.97■■□□□ 1.59
TSPAN4-215ENST00000525334 PIGBQ92521 554 aa24.97■■□□□ 1.59
TSPAN4-215ENST00000525334 CCNL1Q9UK58 526 aaPredicted RBP24.96■■□□□ 1.59
TSPAN4-215ENST00000525334 HSP90AB1P08238 724 aaKnown RBP24.94■■□□□ 1.58
TSPAN4-215ENST00000525334 PPP2R1AP30153 589 aa24.94■■□□□ 1.58
TSPAN4-215ENST00000525334 TMOD3Q9NYL9 352 aa24.94■■□□□ 1.58
TSPAN4-215ENST00000525334 KDM6AO15550 1401 aaPredicted RBP24.94■■□□□ 1.58
TSPAN4-215ENST00000525334 AKT1S1Q96B36 256 aa24.93■■□□□ 1.58
TSPAN4-215ENST00000525334 DCAF5Q96JK2 942 aa24.93■■□□□ 1.58
TSPAN4-215ENST00000525334 ZBTB7AO95365 584 aa24.92■■□□□ 1.58
TSPAN4-215ENST00000525334 C1orf141Q5JVX7 400 aa24.92■■□□□ 1.58
TSPAN4-215ENST00000525334 SMARCC1Q92922 1105 aaPredicted RBP24.92■■□□□ 1.58
TSPAN4-215ENST00000525334 U2SURPO15042 1029 aaKnown RBP24.91■■□□□ 1.58
TSPAN4-215ENST00000525334 CFAP53Q96M91 514 aa24.91■■□□□ 1.58
TSPAN4-215ENST00000525334 C5P01031 1676 aa24.9■■□□□ 1.58
TSPAN4-215ENST00000525334 ERVV-2B6SEH9 535 aa24.89■■□□□ 1.58
TSPAN4-215ENST00000525334 ATF5Q9Y2D1 282 aaPredicted RBP24.89■■□□□ 1.58
TSPAN4-215ENST00000525334 QSER1Q2KHR3 1735 aa24.89■■□□□ 1.57
TSPAN4-215ENST00000525334 TUBGCP6Q96RT7 1819 aa24.89■■□□□ 1.57
TSPAN4-215ENST00000525334 ZEB1P37275 1124 aaPredicted RBP24.88■■□□□ 1.57
TSPAN4-215ENST00000525334 PPP1R1BQ9UD71 204 aaPredicted RBP24.88■■□□□ 1.57
TSPAN4-215ENST00000525334 TAF1LQ8IZX4 1826 aa24.87■■□□□ 1.57
TSPAN4-215ENST00000525334 PTGER2P43116 358 aa24.87■■□□□ 1.57
TSPAN4-215ENST00000525334 MTFR1LQ9H019 292 aa24.87■■□□□ 1.57
TSPAN4-215ENST00000525334 ASAP1Q9ULH1 1129 aa24.87■■□□□ 1.57
TSPAN4-215ENST00000525334 AKAP4Q5JQC9 854 aa24.86■■□□□ 1.57
TSPAN4-215ENST00000525334 CABP4P57796 275 aa24.85■■□□□ 1.57
TSPAN4-215ENST00000525334 DDX10Q13206 875 aaKnown RBP24.85■■□□□ 1.57
TSPAN4-215ENST00000525334 ATG3Q9NT62 314 aa24.85■■□□□ 1.57
TSPAN4-215ENST00000525334 TFCP2L1Q9NZI6 479 aa24.85■■□□□ 1.57
TSPAN4-215ENST00000525334 SCN11AQ9UI33 1791 aa24.85■■□□□ 1.57
TSPAN4-215ENST00000525334 PNPLA7Q6ZV29 1317 aa24.85■■□□□ 1.57
TSPAN4-215ENST00000525334 MTHFSDQ2M296 383 aaKnown RBP24.84■■□□□ 1.57
TSPAN4-215ENST00000525334 LOC102724428A0A0B4J2F2 783 aa24.83■■□□□ 1.57
TSPAN4-215ENST00000525334 SIK1P57059 783 aa24.83■■□□□ 1.57
TSPAN4-215ENST00000525334 C4BP0C0L5 1744 aa24.82■■□□□ 1.56
TSPAN4-215ENST00000525334 HMGB2P26583 209 aaKnown RBP24.82■■□□□ 1.56
TSPAN4-215ENST00000525334 SGIP1Q9BQI5 828 aa24.82■■□□□ 1.56
TSPAN4-215ENST00000525334 NUDCQ9Y266 331 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms