RNA–Protein interactions for RNA: ENST00000525207.1

SF3B2-204, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-204ENST00000525207 NBPF14Q5TI25 921 aa13.13□□□□□ -0.31
SF3B2-204ENST00000525207 EIF4G2P78344 907 aaKnown RBP eCLIP13.12□□□□□ -0.31
SF3B2-204ENST00000525207 LY75O60449 1722 aa13.12□□□□□ -0.31
SF3B2-204ENST00000525207 NCAPD2Q15021 1401 aa13.12□□□□□ -0.31
SF3B2-204ENST00000525207 KCNQ2O43526 872 aa13.11□□□□□ -0.31
SF3B2-204ENST00000525207 HSPA5P11021 654 aaKnown RBP13.11□□□□□ -0.31
SF3B2-204ENST00000525207 ACSBG1Q96GR2 724 aa13.11□□□□□ -0.31
SF3B2-204ENST00000525207 CGNL1Q0VF96 1302 aa13.11□□□□□ -0.31
SF3B2-204ENST00000525207 QSER1Q2KHR3 1735 aa13.1□□□□□ -0.31
SF3B2-204ENST00000525207 TOGARAM1Q9Y4F4 1720 aa13.1□□□□□ -0.31
SF3B2-204ENST00000525207 PROM2Q8N271 834 aa13.1□□□□□ -0.31
SF3B2-204ENST00000525207 TUBGCP6Q96RT7 1819 aa13.09□□□□□ -0.31
SF3B2-204ENST00000525207 TXNRD1Q16881 649 aa13.09□□□□□ -0.31
SF3B2-204ENST00000525207 NSD2O96028 1365 aa13.08□□□□□ -0.31
SF3B2-204ENST00000525207 HSP90AB2PQ58FF8 381 aa13.08□□□□□ -0.32
SF3B2-204ENST00000525207 NBPF6Q5VWK0 638 aa13.08□□□□□ -0.32
SF3B2-204ENST00000525207 NBPF4Q96M43 638 aa13.08□□□□□ -0.32
SF3B2-204ENST00000525207 EMILIN1Q9Y6C2 1016 aa13.08□□□□□ -0.32
SF3B2-204ENST00000525207 USHBP1Q8N6Y0 703 aa13.07□□□□□ -0.32
SF3B2-204ENST00000525207 POLR3GLQ9BT43 218 aa13.07□□□□□ -0.32
SF3B2-204ENST00000525207 DDX54Q8TDD1 881 aaKnown RBP13.06□□□□□ -0.32
SF3B2-204ENST00000525207 ITGB4P16144 1822 aa13.05□□□□□ -0.32
SF3B2-204ENST00000525207 ZCRB1Q8TBF4 217 aaKnown RBP13.05□□□□□ -0.32
SF3B2-204ENST00000525207 RAPGEF4Q8WZA2 1011 aa13.05□□□□□ -0.32
SF3B2-204ENST00000525207 SPON1Q9HCB6 807 aa13.04□□□□□ -0.32
SF3B2-204ENST00000525207 STK32BQ9NY57 414 aa13.04□□□□□ -0.32
SF3B2-204ENST00000525207 C5P01031 1676 aa13.04□□□□□ -0.32
SF3B2-204ENST00000525207 PCDH11XQ9BZA7 1347 aa13.04□□□□□ -0.32
SF3B2-204ENST00000525207 PCDH11YQ9BZA8 1340 aa13.04□□□□□ -0.32
SF3B2-204ENST00000525207 COL24A1Q17RW2 1714 aa13.03□□□□□ -0.32
SF3B2-204ENST00000525207 TATP17735 454 aaPredicted RBP13.03□□□□□ -0.32
SF3B2-204ENST00000525207 SLC15A2Q16348 729 aa13.03□□□□□ -0.32
SF3B2-204ENST00000525207 PDGFDQ9GZP0 370 aaPredicted RBP13.03□□□□□ -0.32
SF3B2-204ENST00000525207 WASHC2AQ641Q2 1341 aa13.03□□□□□ -0.32
SF3B2-204ENST00000525207 TAF1LQ8IZX4 1826 aa13.02□□□□□ -0.32
SF3B2-204ENST00000525207 NPM3O75607 178 aaKnown RBP13.02□□□□□ -0.33
SF3B2-204ENST00000525207 POLKQ9UBT6 870 aa13.02□□□□□ -0.33
SF3B2-204ENST00000525207 PPM1GO15355 546 aaPredicted RBP13.01□□□□□ -0.33
SF3B2-204ENST00000525207 SYTL4Q96C24 671 aaPredicted RBP13.01□□□□□ -0.33
SF3B2-204ENST00000525207 PANK3Q9H999 370 aa13.01□□□□□ -0.33
SF3B2-204ENST00000525207 LRRC4BQ9NT99 713 aa13.01□□□□□ -0.33
SF3B2-204ENST00000525207 PLEKHG2Q9H7P9 1386 aa13.01□□□□□ -0.33
SF3B2-204ENST00000525207 PRIM1P49642 420 aaKnown RBP13□□□□□ -0.33
SF3B2-204ENST00000525207 ZNF827Q17R98 1081 aa13□□□□□ -0.33
SF3B2-204ENST00000525207 SLC27A3Q5K4L6 730 aa13□□□□□ -0.33
SF3B2-204ENST00000525207 KIF7Q2M1P5 1343 aa12.99□□□□□ -0.33
SF3B2-204ENST00000525207 CYP27B1O15528 508 aa12.99□□□□□ -0.33
SF3B2-204ENST00000525207 ZBTB7AO95365 584 aa12.99□□□□□ -0.33
SF3B2-204ENST00000525207 PPP1R1BQ9UD71 204 aaPredicted RBP12.99□□□□□ -0.33
SF3B2-204ENST00000525207 PTGER2P43116 358 aa12.98□□□□□ -0.33
SF3B2-204ENST00000525207 TNNT2P45379 298 aaPredicted RBP12.98□□□□□ -0.33
SF3B2-204ENST00000525207 EIF4A2Q14240 407 aaKnown RBP12.98□□□□□ -0.33
SF3B2-204ENST00000525207 AKT1S1Q96B36 256 aa12.98□□□□□ -0.33
SF3B2-204ENST00000525207 EYA1Q99502 592 aa12.98□□□□□ -0.33
SF3B2-204ENST00000525207 IGSF1Q8N6C5 1336 aa12.97□□□□□ -0.33
SF3B2-204ENST00000525207 MTFR1LQ9H019 292 aa12.97□□□□□ -0.33
SF3B2-204ENST00000525207 C4BP0C0L5 1744 aa12.96□□□□□ -0.33
SF3B2-204ENST00000525207 PALLDQ8WX93 1383 aa12.96□□□□□ -0.33
SF3B2-204ENST00000525207 SGIP1Q9BQI5 828 aa12.96□□□□□ -0.33
SF3B2-204ENST00000525207 PNPLA7Q6ZV29 1317 aa12.95□□□□□ -0.34
SF3B2-204ENST00000525207 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.95□□□□□ -0.342e-7■■■□□ 14.7
SF3B2-204ENST00000525207 CCNL1Q9UK58 526 aaPredicted RBP12.95□□□□□ -0.34
SF3B2-204ENST00000525207 UBR3Q6ZT12 1888 aa12.95□□□□□ -0.34
SF3B2-204ENST00000525207 KCNQ4P56696 695 aa12.94□□□□□ -0.34
SF3B2-204ENST00000525207 NKX1-1Q15270 411 aaPredicted RBP12.94□□□□□ -0.34
SF3B2-204ENST00000525207 AMER1Q5JTC6 1135 aaPredicted RBP12.94□□□□□ -0.34
SF3B2-204ENST00000525207 SPG7Q9UQ90 795 aa12.94□□□□□ -0.34
SF3B2-204ENST00000525207 ATF5Q9Y2D1 282 aaPredicted RBP12.94□□□□□ -0.34
SF3B2-204ENST00000525207 KNSTRNQ9Y448 316 aa12.94□□□□□ -0.34
SF3B2-204ENST00000525207 ZNF831Q5JPB2 1677 aa12.93□□□□□ -0.34
SF3B2-204ENST00000525207 MORC1Q86VD1 984 aa12.93□□□□□ -0.34
SF3B2-204ENST00000525207 KDRP35968 1356 aa12.93□□□□□ -0.34
SF3B2-204ENST00000525207 MAP3K5Q99683 1374 aa12.93□□□□□ -0.34
SF3B2-204ENST00000525207 VIRMAQ69YN4 1812 aaKnown RBP12.92□□□□□ -0.34
SF3B2-204ENST00000525207 COL5A3P25940 1745 aaPredicted RBP12.91□□□□□ -0.34
SF3B2-204ENST00000525207 PHKG2P15735 406 aa12.91□□□□□ -0.34
SF3B2-204ENST00000525207 MPRIPQ6WCQ1 1025 aa12.91□□□□□ -0.34
SF3B2-204ENST00000525207 TFCP2L1Q9NZI6 479 aa12.91□□□□□ -0.34
SF3B2-204ENST00000525207 SCN11AQ9UI33 1791 aa12.91□□□□□ -0.34
SF3B2-204ENST00000525207 KDM6AO15550 1401 aaPredicted RBP12.9□□□□□ -0.34
SF3B2-204ENST00000525207 IFNL2Q8IZJ0 200 aa12.9□□□□□ -0.34
SF3B2-204ENST00000525207 SLC16A10Q8TF71 515 aa12.9□□□□□ -0.34
SF3B2-204ENST00000525207 CICQ96RK0 1608 aaPredicted RBP12.9□□□□□ -0.34
SF3B2-204ENST00000525207 PIGBQ92521 554 aa12.89□□□□□ -0.35
SF3B2-204ENST00000525207 SMARCC1Q92922 1105 aaPredicted RBP12.89□□□□□ -0.35
SF3B2-204ENST00000525207 FHDC1Q9C0D6 1143 aaPredicted RBP12.89□□□□□ -0.35
SF3B2-204ENST00000525207 RNF216Q9NWF9 866 aaPredicted RBP12.89□□□□□ -0.35
SF3B2-204ENST00000525207 NPC1L1Q9UHC9 1359 aa12.89□□□□□ -0.35
SF3B2-204ENST00000525207 COL3A1P02461 1466 aaPredicted RBP12.89□□□□□ -0.35
SF3B2-204ENST00000525207 PER1O15534 1290 aaPredicted RBP12.88□□□□□ -0.35
SF3B2-204ENST00000525207 AEBP1Q8IUX7 1158 aa12.88□□□□□ -0.35
SF3B2-204ENST00000525207 ARXQ96QS3 562 aa12.88□□□□□ -0.35
SF3B2-204ENST00000525207 TMOD3Q9NYL9 352 aa12.88□□□□□ -0.35
SF3B2-204ENST00000525207 ADAMTS7Q9UKP4 1686 aa12.88□□□□□ -0.35
SF3B2-204ENST00000525207 MRC1P22897 1456 aa12.87□□□□□ -0.35
SF3B2-204ENST00000525207 SYT17Q9BSW7 474 aa12.87□□□□□ -0.35
SF3B2-204ENST00000525207 CHD4Q14839 1912 aa12.86□□□□□ -0.35
SF3B2-204ENST00000525207 HMGB2P26583 209 aaKnown RBP12.86□□□□□ -0.35
SF3B2-204ENST00000525207 IL13P35225 146 aa12.86□□□□□ -0.35
SF3B2-204ENST00000525207 COL23A1Q86Y22 540 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms