RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 RGPD1P0DJD0 1748 aa5.91□□□□□ -1.46
CSDE1-209ENST00000525132 ERICH3Q5RHP9 1530 aa5.91□□□□□ -1.46
CSDE1-209ENST00000525132 CD46P15529 392 aa5.91□□□□□ -1.46
CSDE1-209ENST00000525132 PDE4DQ08499 809 aa5.91□□□□□ -1.46
CSDE1-209ENST00000525132 TRAF7Q6Q0C0 670 aa5.91□□□□□ -1.46
CSDE1-209ENST00000525132 THEMISQ8N1K5 641 aaPredicted RBP5.91□□□□□ -1.46
CSDE1-209ENST00000525132 GPCPD1Q9NPB8 672 aa5.91□□□□□ -1.46
CSDE1-209ENST00000525132 WBP1LQ9NX94 342 aa5.91□□□□□ -1.46
CSDE1-209ENST00000525132 TSR3Q9UJK0 312 aaKnown RBP5.91□□□□□ -1.46
CSDE1-209ENST00000525132 GLI3P10071 1580 aa5.91□□□□□ -1.46
CSDE1-209ENST00000525132 PNPLA6Q8IY17 1366 aa5.91□□□□□ -1.46
CSDE1-209ENST00000525132 A0A0G2JS52 829 aa5.9□□□□□ -1.46
CSDE1-209ENST00000525132 MDM2Q00987 491 aaPredicted RBP5.9□□□□□ -1.46
CSDE1-209ENST00000525132 FSTL1Q12841 308 aa5.9□□□□□ -1.46
CSDE1-209ENST00000525132 NYAP1Q6ZVC0 841 aa5.9□□□□□ -1.46
CSDE1-209ENST00000525132 SLF2Q8IX21 1173 aa5.9□□□□□ -1.46
CSDE1-209ENST00000525132 LRRC59Q96AG4 307 aaKnown RBP5.9□□□□□ -1.46
CSDE1-209ENST00000525132 AIDAQ96BJ3 306 aa5.9□□□□□ -1.46
CSDE1-209ENST00000525132 MROH2AA6NES4 1674 aa5.9□□□□□ -1.47
CSDE1-209ENST00000525132 ADAMTS7Q9UKP4 1686 aa5.9□□□□□ -1.47
CSDE1-209ENST00000525132 SETD5Q9C0A6 1442 aa5.9□□□□□ -1.47
CSDE1-209ENST00000525132 CCDC88BA6NC98 1476 aa5.9□□□□□ -1.47
CSDE1-209ENST00000525132 APBA3O96018 575 aa5.89□□□□□ -1.47
CSDE1-209ENST00000525132 MS4A1P11836 297 aa5.89□□□□□ -1.47
CSDE1-209ENST00000525132 CLCN1P35523 988 aa5.89□□□□□ -1.47
CSDE1-209ENST00000525132 SOX10P56693 466 aa5.89□□□□□ -1.47
CSDE1-209ENST00000525132 ARXQ96QS3 562 aa5.89□□□□□ -1.47
CSDE1-209ENST00000525132 HPS5Q9UPZ3 1129 aa5.89□□□□□ -1.47
CSDE1-209ENST00000525132 NUP188Q5SRE5 1749 aa5.88□□□□□ -1.47
CSDE1-209ENST00000525132 GIGYF2Q6Y7W6 1299 aaKnown RBP5.88□□□□□ -1.47
CSDE1-209ENST00000525132 KRI1Q8N9T8 703 aaKnown RBP5.88□□□□□ -1.47
CSDE1-209ENST00000525132 BAHCC1Q9P281 2608 aa5.88□□□□□ -1.47
CSDE1-209ENST00000525132 KIF14Q15058 1648 aa5.88□□□□□ -1.47
CSDE1-209ENST00000525132 ITGBL1O95965 494 aaPredicted RBP5.87□□□□□ -1.47
CSDE1-209ENST00000525132 HSPA8P11142 646 aaKnown RBP5.87□□□□□ -1.47
CSDE1-209ENST00000525132 GCGRP47871 477 aa5.87□□□□□ -1.47
CSDE1-209ENST00000525132 HNRNPMP52272 730 aaKnown RBP eCLIP5.87□□□□□ -1.47
CSDE1-209ENST00000525132 PTPN5P54829 565 aa5.87□□□□□ -1.47
CSDE1-209ENST00000525132 BRPF1P55201 1214 aaPredicted RBP5.87□□□□□ -1.47
CSDE1-209ENST00000525132 NMRK2Q9NPI5 230 aa5.87□□□□□ -1.47
CSDE1-209ENST00000525132 MAP3K5Q99683 1374 aa5.87□□□□□ -1.47
CSDE1-209ENST00000525132 PLCH2O75038 1416 aa5.87□□□□□ -1.47
CSDE1-209ENST00000525132 ZC3H13Q5T200 1668 aaKnown RBP5.87□□□□□ -1.47
CSDE1-209ENST00000525132 TNS1Q9HBL0 1735 aaKnown RBP5.87□□□□□ -1.47
CSDE1-209ENST00000525132 CASZ1Q86V15 1759 aa5.87□□□□□ -1.47
CSDE1-209ENST00000525132 ITSN2Q9NZM3 1697 aa5.86□□□□□ -1.47
CSDE1-209ENST00000525132 SCAPERQ9BY12 1400 aa5.86□□□□□ -1.47
CSDE1-209ENST00000525132 PARD3Q8TEW0 1356 aa5.86□□□□□ -1.47
CSDE1-209ENST00000525132 GOLGA8CPA6NN73 597 aa5.86□□□□□ -1.47
CSDE1-209ENST00000525132 ACTN4O43707 911 aaKnown RBP5.86□□□□□ -1.47
CSDE1-209ENST00000525132 SULF1Q8IWU6 871 aa5.86□□□□□ -1.47
CSDE1-209ENST00000525132 STAC3Q96MF2 364 aa5.86□□□□□ -1.47
CSDE1-209ENST00000525132 DISP1Q96F81 1524 aa5.85□□□□□ -1.47
CSDE1-209ENST00000525132 FAM135AQ9P2D6 1515 aa5.85□□□□□ -1.47
CSDE1-209ENST00000525132 TRIM37O94972 964 aa5.85□□□□□ -1.47
CSDE1-209ENST00000525132 CFHP08603 1231 aa5.85□□□□□ -1.47
CSDE1-209ENST00000525132 KCTD2Q14681 263 aa5.85□□□□□ -1.47
CSDE1-209ENST00000525132 TJAP1Q5JTD0 557 aa5.85□□□□□ -1.47
CSDE1-209ENST00000525132 BRINP3Q76B58 766 aa5.85□□□□□ -1.47
CSDE1-209ENST00000525132 RREB1Q92766 1687 aa5.85□□□□□ -1.47
CSDE1-209ENST00000525132 CICQ96RK0 1608 aaPredicted RBP5.85□□□□□ -1.47
CSDE1-209ENST00000525132 TIAM1Q13009 1591 aa5.84□□□□□ -1.47
CSDE1-209ENST00000525132 TOP2AP11388 1531 aaKnown RBP5.84□□□□□ -1.47
CSDE1-209ENST00000525132 SSTR3P32745 418 aaPredicted RBP5.84□□□□□ -1.47
CSDE1-209ENST00000525132 PPP4CP60510 307 aa5.84□□□□□ -1.47
CSDE1-209ENST00000525132 NLGN2Q8NFZ4 835 aa5.84□□□□□ -1.47
CSDE1-209ENST00000525132 NECTIN2Q92692 538 aa5.84□□□□□ -1.47
CSDE1-209ENST00000525132 KDM4CQ9H3R0 1056 aa5.84□□□□□ -1.47
CSDE1-209ENST00000525132 ATP7AQ04656 1500 aa5.84□□□□□ -1.48
CSDE1-209ENST00000525132 PLEKHG3A1L390 1219 aa5.83□□□□□ -1.48
CSDE1-209ENST00000525132 DDX11L8A8MPP1 907 aa5.83□□□□□ -1.48
CSDE1-209ENST00000525132 ZNF787Q6DD87 383 aa5.83□□□□□ -1.48
CSDE1-209ENST00000525132 C16orf71Q8IYS4 520 aaPredicted RBP5.83□□□□□ -1.48
CSDE1-209ENST00000525132 NBPF15Q8N660 670 aa5.83□□□□□ -1.48
CSDE1-209ENST00000525132 DDX17Q92841 729 aaKnown RBP5.83□□□□□ -1.48
CSDE1-209ENST00000525132 MCOLN1Q9GZU1 580 aa5.83□□□□□ -1.48
CSDE1-209ENST00000525132 MKRN1Q9UHC7 482 aaKnown RBP5.83□□□□□ -1.48
CSDE1-209ENST00000525132 UNC80Q8N2C7 3258 aa5.83□□□□□ -1.48
CSDE1-209ENST00000525132 DIP2CQ9Y2E4 1556 aa5.82□□□□□ -1.48
CSDE1-209ENST00000525132 KCNA6P17658 529 aa5.82□□□□□ -1.48
CSDE1-209ENST00000525132 TTLL12Q14166 644 aaPredicted RBP5.82□□□□□ -1.48
CSDE1-209ENST00000525132 MORN1Q5T089 497 aa5.82□□□□□ -1.48
CSDE1-209ENST00000525132 THAP11Q96EK4 314 aa5.82□□□□□ -1.48
CSDE1-209ENST00000525132 CLTCQ00610 1675 aaKnown RBP5.82□□□□□ -1.48
CSDE1-209ENST00000525132 MAST1Q9Y2H9 1570 aa5.81□□□□□ -1.48
CSDE1-209ENST00000525132 ABCC3O15438 1527 aa5.81□□□□□ -1.48
CSDE1-209ENST00000525132 HOXA2O43364 376 aa5.81□□□□□ -1.48
CSDE1-209ENST00000525132 MYT1Q01538 1121 aa5.81□□□□□ -1.48
CSDE1-209ENST00000525132 FBXO31Q5XUX0 539 aaPredicted RBP5.81□□□□□ -1.48
CSDE1-209ENST00000525132 UNC5CLQ8IV45 518 aa5.81□□□□□ -1.48
CSDE1-209ENST00000525132 SPIRE2Q8WWL2 714 aa5.81□□□□□ -1.48
CSDE1-209ENST00000525132 PRR14Q9BWN1 585 aa5.81□□□□□ -1.48
CSDE1-209ENST00000525132 PTCH1Q13635 1447 aa5.81□□□□□ -1.48
CSDE1-209ENST00000525132 REREQ9P2R6 1566 aa5.8□□□□□ -1.48
CSDE1-209ENST00000525132 PRDM15P57071 1507 aaPredicted RBP5.8□□□□□ -1.48
CSDE1-209ENST00000525132 GJA5P36382 358 aa5.8□□□□□ -1.48
CSDE1-209ENST00000525132 HDGFP51858 240 aaKnown RBP5.8□□□□□ -1.48
CSDE1-209ENST00000525132 FUT2Q10981 343 aa5.8□□□□□ -1.48
CSDE1-209ENST00000525132 MTRQ99707 1265 aa5.8□□□□□ -1.48
CSDE1-209ENST00000525132 KRTAP4-8Q9BYQ9 185 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms