RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 FAM182BQ5T319 152 aa20.41■□□□□ 0.86
SF3B2-202ENST00000524475 PPP2R1AP30153 589 aa20.4■□□□□ 0.86
SF3B2-202ENST00000524475 ZCRB1Q8TBF4 217 aaKnown RBP20.4■□□□□ 0.86
SF3B2-202ENST00000524475 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.4■□□□□ 0.86
SF3B2-202ENST00000524475 RALBP1Q15311 655 aa20.39■□□□□ 0.85
SF3B2-202ENST00000524475 DIAPH1O60610 1272 aaKnown RBP20.38■□□□□ 0.85
SF3B2-202ENST00000524475 NHSQ6T4R5 1651 aa20.38■□□□□ 0.85
SF3B2-202ENST00000524475 SF3B2Q13435 895 aaKnown RBP20.37■□□□□ 0.85
SF3B2-202ENST00000524475 CNGB1Q14028 1251 aaPredicted RBP20.37■□□□□ 0.85
SF3B2-202ENST00000524475 PCDH11XQ9BZA7 1347 aa20.36■□□□□ 0.85
SF3B2-202ENST00000524475 PCDH11YQ9BZA8 1340 aa20.36■□□□□ 0.85
SF3B2-202ENST00000524475 CFAP53Q96M91 514 aa20.36■□□□□ 0.85
SF3B2-202ENST00000524475 RGPD3A6NKT7 1758 aaPredicted RBP20.36■□□□□ 0.85
SF3B2-202ENST00000524475 RGPD4Q7Z3J3 1758 aa20.36■□□□□ 0.85
SF3B2-202ENST00000524475 TRIM37O94972 964 aa20.34■□□□□ 0.85
SF3B2-202ENST00000524475 BCL11BQ9C0K0 894 aaPredicted RBP20.34■□□□□ 0.85
SF3B2-202ENST00000524475 BAG6P46379 1132 aa20.33■□□□□ 0.85
SF3B2-202ENST00000524475 SPG7Q9UQ90 795 aa20.33■□□□□ 0.85
SF3B2-202ENST00000524475 SULT6B1Q6IMI4 303 aa20.32■□□□□ 0.84
SF3B2-202ENST00000524475 DDX54Q8TDD1 881 aaKnown RBP20.32■□□□□ 0.84
SF3B2-202ENST00000524475 AMOTQ4VCS5 1084 aa20.31■□□□□ 0.84
SF3B2-202ENST00000524475 AEBP1Q8IUX7 1158 aa20.31■□□□□ 0.84
SF3B2-202ENST00000524475 DOT1LQ8TEK3 1739 aa20.3■□□□□ 0.84
SF3B2-202ENST00000524475 CYP27B1O15528 508 aa20.3■□□□□ 0.84
SF3B2-202ENST00000524475 NKX1-1Q15270 411 aaPredicted RBP20.3■□□□□ 0.84
SF3B2-202ENST00000524475 MYBBP1AQ9BQG0 1328 aaKnown RBP20.29■□□□□ 0.84
SF3B2-202ENST00000524475 NUDCQ9Y266 331 aa20.29■□□□□ 0.84
SF3B2-202ENST00000524475 PLEKHO1Q53GL0 409 aaPredicted RBP20.28■□□□□ 0.84
SF3B2-202ENST00000524475 PRKRIP1Q9H875 184 aaPredicted RBP20.28■□□□□ 0.84
SF3B2-202ENST00000524475 RREB1Q92766 1687 aa20.27■□□□□ 0.84
SF3B2-202ENST00000524475 PLSCR1O15162 318 aa20.27■□□□□ 0.84
SF3B2-202ENST00000524475 APBA3O96018 575 aa20.27■□□□□ 0.84
SF3B2-202ENST00000524475 DEFB132Q7Z7B7 95 aa20.27■□□□□ 0.84
SF3B2-202ENST00000524475 IFNL2Q8IZJ0 200 aa20.27■□□□□ 0.84
SF3B2-202ENST00000524475 BTAF1O14981 1849 aa20.27■□□□□ 0.84
SF3B2-202ENST00000524475 KAT6BQ8WYB5 2073 aa20.26■□□□□ 0.83
SF3B2-202ENST00000524475 PHKG2P15735 406 aa20.26■□□□□ 0.83
SF3B2-202ENST00000524475 CAMKK2Q96RR4 588 aa20.26■□□□□ 0.83
SF3B2-202ENST00000524475 TOGARAM1Q9Y4F4 1720 aa20.26■□□□□ 0.83
SF3B2-202ENST00000524475 KCNQ2O43526 872 aa20.24■□□□□ 0.83
SF3B2-202ENST00000524475 HSP90AB1P08238 724 aaKnown RBP20.24■□□□□ 0.83
SF3B2-202ENST00000524475 HMOX1P09601 288 aa20.24■□□□□ 0.83
SF3B2-202ENST00000524475 U2SURPO15042 1029 aaKnown RBP20.23■□□□□ 0.83
SF3B2-202ENST00000524475 EN1Q05925 392 aaPredicted RBP20.23■□□□□ 0.83
SF3B2-202ENST00000524475 PTF1AQ7RTS3 328 aa20.23■□□□□ 0.83
SF3B2-202ENST00000524475 ACSBG1Q96GR2 724 aa20.23■□□□□ 0.83
SF3B2-202ENST00000524475 ITGB4P16144 1822 aa20.23■□□□□ 0.83
SF3B2-202ENST00000524475 ZNF530Q6P9A1 599 aaPredicted RBP20.21■□□□□ 0.83
SF3B2-202ENST00000524475 RSPH6AQ9H0K4 717 aa20.21■□□□□ 0.83
SF3B2-202ENST00000524475 NUP188Q5SRE5 1749 aa20.2■□□□□ 0.82
SF3B2-202ENST00000524475 FCHSD2O94868 740 aa20.2■□□□□ 0.82
SF3B2-202ENST00000524475 PRIM1P49642 420 aaKnown RBP20.2■□□□□ 0.82
SF3B2-202ENST00000524475 EZH2Q15910 746 aaKnown RBP20.2■□□□□ 0.82
SF3B2-202ENST00000524475 ADAMTS7Q9UKP4 1686 aa20.19■□□□□ 0.82
SF3B2-202ENST00000524475 U2AF1L5P0DN76 240 aaPredicted RBP20.19■□□□□ 0.82
SF3B2-202ENST00000524475 U2AF1Q01081 240 aaKnown RBP eCLIP20.19■□□□□ 0.82
SF3B2-202ENST00000524475 AKAP4Q5JQC9 854 aa20.19■□□□□ 0.82
SF3B2-202ENST00000524475 DCAF5Q96JK2 942 aa20.19■□□□□ 0.82
SF3B2-202ENST00000524475 LY75O60449 1722 aa20.19■□□□□ 0.82
SF3B2-202ENST00000524475 KDM6AO15550 1401 aaPredicted RBP20.19■□□□□ 0.82
SF3B2-202ENST00000524475 SCN11AQ9UI33 1791 aa20.18■□□□□ 0.82
SF3B2-202ENST00000524475 C1orf141Q5JVX7 400 aa20.18■□□□□ 0.82
SF3B2-202ENST00000524475 ERVV-2B6SEH9 535 aa20.17■□□□□ 0.82
SF3B2-202ENST00000524475 PRKAR2BP31323 418 aa20.16■□□□□ 0.82
SF3B2-202ENST00000524475 MTHFSDQ2M296 383 aaKnown RBP20.16■□□□□ 0.82
SF3B2-202ENST00000524475 GAS2L2Q8NHY3 880 aa20.16■□□□□ 0.82
SF3B2-202ENST00000524475 SYTL4Q96C24 671 aaPredicted RBP20.16■□□□□ 0.82
SF3B2-202ENST00000524475 MRC1P22897 1456 aa20.15■□□□□ 0.82
SF3B2-202ENST00000524475 VIRMAQ69YN4 1812 aaKnown RBP20.15■□□□□ 0.82
SF3B2-202ENST00000524475 PROM2Q8N271 834 aa20.14■□□□□ 0.81
SF3B2-202ENST00000524475 TXNRD1Q16881 649 aa20.13■□□□□ 0.81
SF3B2-202ENST00000524475 SLC27A3Q5K4L6 730 aa20.13■□□□□ 0.81
SF3B2-202ENST00000524475 PNNQ9H307 717 aaKnown RBP20.13■□□□□ 0.81
SF3B2-202ENST00000524475 PAPPAQ13219 1627 aa20.13■□□□□ 0.81
SF3B2-202ENST00000524475 ANP32CO43423 234 aa20.12■□□□□ 0.81
SF3B2-202ENST00000524475 PIGBQ92521 554 aa20.12■□□□□ 0.81
SF3B2-202ENST00000524475 TMOD3Q9NYL9 352 aa20.12■□□□□ 0.81
SF3B2-202ENST00000524475 MAP3K5Q99683 1374 aa20.11■□□□□ 0.81
SF3B2-202ENST00000524475 MPRIPQ6WCQ1 1025 aa20.11■□□□□ 0.81
SF3B2-202ENST00000524475 SMARCC1Q92922 1105 aaPredicted RBP20.11■□□□□ 0.81
SF3B2-202ENST00000524475 PHACTR3Q96KR7 559 aa20.11■□□□□ 0.81
SF3B2-202ENST00000524475 HMGB2P26583 209 aaKnown RBP20.1■□□□□ 0.81
SF3B2-202ENST00000524475 PLEKHF1Q96S99 279 aa20.1■□□□□ 0.81
SF3B2-202ENST00000524475 ZNF831Q5JPB2 1677 aa20.09■□□□□ 0.81
SF3B2-202ENST00000524475 PALLDQ8WX93 1383 aa20.08■□□□□ 0.81
SF3B2-202ENST00000524475 GNAT3A8MTJ3 354 aa20.08■□□□□ 0.81
SF3B2-202ENST00000524475 RNMTO43148 476 aaKnown RBP20.08■□□□□ 0.81
SF3B2-202ENST00000524475 NEFMP07197 916 aa20.08■□□□□ 0.81
SF3B2-202ENST00000524475 NBPF14Q5TI25 921 aa20.08■□□□□ 0.81
SF3B2-202ENST00000524475 CEMIPQ8WUJ3 1361 aa20.08■□□□□ 0.8
SF3B2-202ENST00000524475 CABP4P57796 275 aa20.07■□□□□ 0.8
SF3B2-202ENST00000524475 SIPA1L3O60292 1781 aaPredicted RBP20.06■□□□□ 0.8
SF3B2-202ENST00000524475 HTATSF1O43719 755 aaKnown RBP20.06■□□□□ 0.8
SF3B2-202ENST00000524475 WDR43Q15061 677 aaKnown RBP eCLIP20.06■□□□□ 0.8
SF3B2-202ENST00000524475 SLC52A2Q9HAB3 445 aa20.06■□□□□ 0.8
SF3B2-202ENST00000524475 LGR6Q9HBX8 967 aa20.05■□□□□ 0.8
SF3B2-202ENST00000524475 LRRC4BQ9NT99 713 aa20.05■□□□□ 0.8
SF3B2-202ENST00000524475 CICQ96RK0 1608 aaPredicted RBP20.05■□□□□ 0.8
SF3B2-202ENST00000524475 TAF1LQ8IZX4 1826 aa20.04■□□□□ 0.8
SF3B2-202ENST00000524475 DLG5Q8TDM6 1919 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms