RNA–Protein interactions for RNA: ENST00000524226.5

PCM1-222, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 5,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-222ENST00000524226 PLEKHG3A1L390 1219 aa3.18□□□□□ -1.9
PCM1-222ENST00000524226 RAPGEF4Q8WZA2 1011 aa3.18□□□□□ -1.9
PCM1-222ENST00000524226 C8orf37Q96NL8 207 aa3.18□□□□□ -1.9
PCM1-222ENST00000524226 PHF8Q9UPP1 1060 aa3.18□□□□□ -1.9
PCM1-222ENST00000524226 CPSF1Q10570 1443 aaKnown RBP3.18□□□□□ -1.9
PCM1-222ENST00000524226 USP6P35125 1406 aa3.17□□□□□ -1.9
PCM1-222ENST00000524226 GAS2L2Q8NHY3 880 aa3.17□□□□□ -1.9
PCM1-222ENST00000524226 AIDAQ96BJ3 306 aa3.17□□□□□ -1.9
PCM1-222ENST00000524226 IQSEC2Q5JU85 1478 aa3.17□□□□□ -1.9
PCM1-222ENST00000524226 CD163L1Q9NR16 1453 aa3.17□□□□□ -1.9
PCM1-222ENST00000524226 SHPRHQ149N8 1683 aa3.17□□□□□ -1.9
PCM1-222ENST00000524226 BCAR3O75815 825 aa3.17□□□□□ -1.9
PCM1-222ENST00000524226 KCNA6P17658 529 aa3.17□□□□□ -1.9
PCM1-222ENST00000524226 CDR1P51861 262 aa3.17□□□□□ -1.9
PCM1-222ENST00000524226 TOM1L2Q6ZVM7 507 aa3.17□□□□□ -1.9
PCM1-222ENST00000524226 DZIP1LQ8IYY4 767 aaKnown RBP3.17□□□□□ -1.9
PCM1-222ENST00000524226 IFT57Q9NWB7 429 aa3.17□□□□□ -1.9
PCM1-222ENST00000524226 FANCIQ9NVI1 1328 aa3.17□□□□□ -1.9
PCM1-222ENST00000524226 EXOSC9Q06265 439 aaKnown RBP3.17□□□□□ -1.9
PCM1-222ENST00000524226 NUTM2GQ5VZR2 741 aa3.17□□□□□ -1.9
PCM1-222ENST00000524226 KCNH5Q8NCM2 988 aa3.17□□□□□ -1.9
PCM1-222ENST00000524226 GPATCH3Q96I76 525 aa3.17□□□□□ -1.9
PCM1-222ENST00000524226 NAP1L2Q9ULW6 460 aaPredicted RBP3.17□□□□□ -1.9
PCM1-222ENST00000524226 ZNF521Q96K83 1311 aa3.17□□□□□ -1.9
PCM1-222ENST00000524226 NCKAP5LQ9HCH0 1330 aa3.17□□□□□ -1.9
PCM1-222ENST00000524226 PTPRUQ92729 1446 aa3.17□□□□□ -1.9
PCM1-222ENST00000524226 MON2Q7Z3U7 1717 aa3.17□□□□□ -1.9
PCM1-222ENST00000524226 SULT6B1Q6IMI4 303 aa3.17□□□□□ -1.9
PCM1-222ENST00000524226 TSR2Q969E8 191 aaKnown RBP3.17□□□□□ -1.9
PCM1-222ENST00000524226 BCL2L13Q9BXK5 485 aa3.17□□□□□ -1.9
PCM1-222ENST00000524226 NLRP2Q9NX02 1062 aa3.17□□□□□ -1.9
PCM1-222ENST00000524226 DDX19BQ9UMR2 479 aa3.17□□□□□ -1.9
PCM1-222ENST00000524226 FLT4P35916 1363 aa3.17□□□□□ -1.9
PCM1-222ENST00000524226 ZNF142P52746 1687 aaPredicted RBP3.17□□□□□ -1.9
PCM1-222ENST00000524226 CLUAP1Q96AJ1 413 aa3.16□□□□□ -1.9
PCM1-222ENST00000524226 ZNF428Q96B54 188 aa3.16□□□□□ -1.9
PCM1-222ENST00000524226 RSPH6AQ9H0K4 717 aa3.16□□□□□ -1.9
PCM1-222ENST00000524226 COG6Q9Y2V7 657 aa3.16□□□□□ -1.9
PCM1-222ENST00000524226 SBNO1A3KN83 1393 aa3.16□□□□□ -1.9
PCM1-222ENST00000524226 ARHGEF10O15013 1369 aa3.16□□□□□ -1.9
PCM1-222ENST00000524226 IL13P35225 146 aa3.16□□□□□ -1.9
PCM1-222ENST00000524226 RGS3P49796 1198 aa3.16□□□□□ -1.9
PCM1-222ENST00000524226 RARSP54136 660 aaKnown RBP3.16□□□□□ -1.9
PCM1-222ENST00000524226 STK32BQ9NY57 414 aa3.16□□□□□ -1.9
PCM1-222ENST00000524226 PRR36Q9H6K5 1346 aa3.16□□□□□ -1.9
PCM1-222ENST00000524226 AKAP12Q02952 1782 aa3.16□□□□□ -1.9
PCM1-222ENST00000524226 TPM1P09493 284 aa3.16□□□□□ -1.9
PCM1-222ENST00000524226 HSP90B1P14625 803 aaKnown RBP3.16□□□□□ -1.9
PCM1-222ENST00000524226 ALDH1L2Q3SY69 923 aa3.16□□□□□ -1.9
PCM1-222ENST00000524226 AMOTL1Q8IY63 956 aa3.16□□□□□ -1.9
PCM1-222ENST00000524226 PANK1Q8TE04 598 aa3.16□□□□□ -1.9
PCM1-222ENST00000524226 PLEKHF1Q96S99 279 aa3.16□□□□□ -1.9
PCM1-222ENST00000524226 CLEC11AQ9Y240 323 aa3.16□□□□□ -1.9
PCM1-222ENST00000524226 CHMP3Q9Y3E7 222 aa3.16□□□□□ -1.9
PCM1-222ENST00000524226 HMMRO75330 724 aa3.16□□□□□ -1.9
PCM1-222ENST00000524226 RXRBP28702 533 aa3.16□□□□□ -1.9
PCM1-222ENST00000524226 TSR1Q2NL82 804 aaKnown RBP3.16□□□□□ -1.9
PCM1-222ENST00000524226 TRMT2AQ8IZ69 625 aaKnown RBP3.16□□□□□ -1.9
PCM1-222ENST00000524226 STK31Q9BXU1 1019 aa3.16□□□□□ -1.9
PCM1-222ENST00000524226 PRDM11Q9NQV5 511 aa3.16□□□□□ -1.9
PCM1-222ENST00000524226 ATP6V1DQ9Y5K8 247 aa3.16□□□□□ -1.9
PCM1-222ENST00000524226 COL3A1P02461 1466 aaPredicted RBP3.16□□□□□ -1.9
PCM1-222ENST00000524226 TPM2P07951 284 aa3.16□□□□□ -1.9
PCM1-222ENST00000524226 HSPA2P54652 639 aa3.16□□□□□ -1.9
PCM1-222ENST00000524226 EIF4A2Q14240 407 aaKnown RBP3.16□□□□□ -1.9
PCM1-222ENST00000524226 GPR162Q16538 588 aa3.16□□□□□ -1.9
PCM1-222ENST00000524226 SKOR2Q2VWA4 1001 aaPredicted RBP3.16□□□□□ -1.9
PCM1-222ENST00000524226 TOPAZ1Q8N9V7 1692 aa3.16□□□□□ -1.9
PCM1-222ENST00000524226 API5Q9BZZ5 524 aaKnown RBP3.16□□□□□ -1.9
PCM1-222ENST00000524226 LRRC7Q96NW7 1537 aa3.15□□□□□ -1.9
PCM1-222ENST00000524226 PNPLA6Q8IY17 1366 aa3.15□□□□□ -1.9
PCM1-222ENST00000524226 DDX11L8A8MPP1 907 aa3.15□□□□□ -1.9
PCM1-222ENST00000524226 DEKP35659 375 aaKnown RBP3.15□□□□□ -1.9
PCM1-222ENST00000524226 GORABQ5T7V8 394 aa3.15□□□□□ -1.9
PCM1-222ENST00000524226 NOB1Q9ULX3 412 aaKnown RBP3.15□□□□□ -1.9
PCM1-222ENST00000524226 ADGRL3Q9HAR2 1447 aa3.15□□□□□ -1.9
PCM1-222ENST00000524226 FBLN1P23142 703 aa3.15□□□□□ -1.9
PCM1-222ENST00000524226 MVPQ14764 893 aaKnown RBP3.15□□□□□ -1.9
PCM1-222ENST00000524226 TWISTNBQ3B726 338 aaPredicted RBP3.15□□□□□ -1.9
PCM1-222ENST00000524226 TEX35Q5T0J7 233 aa3.15□□□□□ -1.9
PCM1-222ENST00000524226 C20orf194Q5TEA3 1177 aa3.15□□□□□ -1.9
PCM1-222ENST00000524226 CADPS2Q86UW7 1296 aa3.15□□□□□ -1.9
PCM1-222ENST00000524226 ACBD3Q9H3P7 528 aa3.15□□□□□ -1.9
PCM1-222ENST00000524226 TSPYL4Q9UJ04 414 aa3.15□□□□□ -1.9
PCM1-222ENST00000524226 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.15□□□□□ -1.9
PCM1-222ENST00000524226 RTL1A6NKG5 1358 aa3.15□□□□□ -1.91
PCM1-222ENST00000524226 TTLL12Q14166 644 aaPredicted RBP3.15□□□□□ -1.91
PCM1-222ENST00000524226 NOM1Q5C9Z4 860 aaKnown RBP3.15□□□□□ -1.91
PCM1-222ENST00000524226 CNKSR2Q8WXI2 1034 aa3.15□□□□□ -1.91
PCM1-222ENST00000524226 XRN1Q8IZH2 1706 aaKnown RBP3.15□□□□□ -1.91
PCM1-222ENST00000524226 ADAMTSL3P82987 1691 aa3.15□□□□□ -1.91
PCM1-222ENST00000524226 RRP12Q5JTH9 1297 aaKnown RBP3.15□□□□□ -1.91
PCM1-222ENST00000524226 PRM3Q9NNZ6 103 aa3.15□□□□□ -1.91
PCM1-222ENST00000524226 SPINK5Q9NQ38 1064 aaPredicted RBP3.15□□□□□ -1.91
PCM1-222ENST00000524226 KIF24Q5T7B8 1368 aa3.15□□□□□ -1.91
PCM1-222ENST00000524226 PLEKHO1Q53GL0 409 aaPredicted RBP3.15□□□□□ -1.91
PCM1-222ENST00000524226 ATF7IPQ6VMQ6 1270 aa3.15□□□□□ -1.91
PCM1-222ENST00000524226 TRIM35Q9UPQ4 493 aa3.15□□□□□ -1.91
PCM1-222ENST00000524226 OVOS2A0A0J9YW53 1432 aa3.14□□□□□ -1.91
PCM1-222ENST00000524226 OVOS2Q6IE36 1432 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms