RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	SEPT12	Q8IYM1	358 aa		10.32	□□□□□ -0.76
SPIDR-223	ENST00000524033	LARP6	Q9BRS8	491 aa	Known RBP	10.32	□□□□□ -0.76
SPIDR-223	ENST00000524033	KNDC1	Q76NI1	1749 aa		10.31	□□□□□ -0.76
SPIDR-223	ENST00000524033	ONECUT3	O60422	494 aa	Predicted RBP	10.31	□□□□□ -0.76
SPIDR-223	ENST00000524033	MS4A1	P11836	297 aa		10.31	□□□□□ -0.76
SPIDR-223	ENST00000524033	TESK2	Q96S53	571 aa		10.31	□□□□□ -0.76
SPIDR-223	ENST00000524033	OCEL1	Q9H607	264 aa		10.31	□□□□□ -0.76
SPIDR-223	ENST00000524033	BTG4	Q9NY30	223 aa		10.31	□□□□□ -0.76
SPIDR-223	ENST00000524033	RCAN3	Q9UKA8	241 aa		10.31	□□□□□ -0.76
SPIDR-223	ENST00000524033	SLIT2	O94813	1529 aa		10.31	□□□□□ -0.76
SPIDR-223	ENST00000524033	EXOC6	Q8TAG9	804 aa		10.3	□□□□□ -0.76
SPIDR-223	ENST00000524033	FMN2	Q9NZ56	1722 aa		10.3	□□□□□ -0.76
SPIDR-223	ENST00000524033	DPY19L2	Q6NUT2	758 aa		10.29	□□□□□ -0.76
SPIDR-223	ENST00000524033	KIF1A	Q12756	1690 aa		10.28	□□□□□ -0.76
SPIDR-223	ENST00000524033		A0A0G2JS52	829 aa		10.28	□□□□□ -0.76
SPIDR-223	ENST00000524033	PLEKHG3	A1L390	1219 aa		10.28	□□□□□ -0.76
SPIDR-223	ENST00000524033	SRPK2	P78362	688 aa	Known RBP	10.28	□□□□□ -0.76
SPIDR-223	ENST00000524033	NUTM2G	Q5VZR2	741 aa		10.28	□□□□□ -0.76
SPIDR-223	ENST00000524033	KRT27	Q7Z3Y8	459 aa		10.28	□□□□□ -0.76
SPIDR-223	ENST00000524033	POLR3GL	Q9BT43	218 aa		10.28	□□□□□ -0.76
SPIDR-223	ENST00000524033	PRDM11	Q9NQV5	511 aa		10.28	□□□□□ -0.76
SPIDR-223	ENST00000524033	ACE	P12821	1306 aa		10.28	□□□□□ -0.76
SPIDR-223	ENST00000524033	SF3B2	Q13435	895 aa	Known RBP	10.27	□□□□□ -0.77
SPIDR-223	ENST00000524033	E2F4	Q16254	413 aa		10.27	□□□□□ -0.77
SPIDR-223	ENST00000524033	FAM98C	Q17RN3	349 aa	Known RBP	10.27	□□□□□ -0.77
SPIDR-223	ENST00000524033	ABTB2	Q8N961	1025 aa		10.27	□□□□□ -0.77
SPIDR-223	ENST00000524033	DDX27	Q96GQ7	796 aa	Known RBP	10.27	□□□□□ -0.77
SPIDR-223	ENST00000524033	BACH2	Q9BYV9	841 aa		10.27	□□□□□ -0.77
SPIDR-223	ENST00000524033	TULP4	Q9NRJ4	1543 aa		10.27	□□□□□ -0.77
SPIDR-223	ENST00000524033	ZC3H6	P61129	1189 aa	Known RBP	10.26	□□□□□ -0.77
SPIDR-223	ENST00000524033	KCNV2	Q8TDN2	545 aa		10.26	□□□□□ -0.77
SPIDR-223	ENST00000524033	CENPJ	Q9HC77	1338 aa	Predicted RBP	10.26	□□□□□ -0.77
SPIDR-223	ENST00000524033	EVA1C	P58658	441 aa		10.25	□□□□□ -0.77
SPIDR-223	ENST00000524033	IRX5	P78411	483 aa	Predicted RBP	10.25	□□□□□ -0.77
SPIDR-223	ENST00000524033	CHRNA2	Q15822	529 aa		10.25	□□□□□ -0.77
SPIDR-223	ENST00000524033	TMC2	Q8TDI7	906 aa		10.25	□□□□□ -0.77
SPIDR-223	ENST00000524033	BOLA1	Q9Y3E2	137 aa		10.25	□□□□□ -0.77
SPIDR-223	ENST00000524033	ADGRB2	O60241	1585 aa		10.25	□□□□□ -0.77
SPIDR-223	ENST00000524033	ZNF521	Q96K83	1311 aa		10.25	□□□□□ -0.77
SPIDR-223	ENST00000524033	NPC1L1	Q9UHC9	1359 aa		10.25	□□□□□ -0.77
SPIDR-223	ENST00000524033	MICALL2	Q8IY33	904 aa		10.24	□□□□□ -0.77
SPIDR-223	ENST00000524033	PDCD7	Q8N8D1	485 aa	Known RBP	10.24	□□□□□ -0.77
SPIDR-223	ENST00000524033	SLC39A7	Q92504	469 aa		10.24	□□□□□ -0.77
SPIDR-223	ENST00000524033	L3MBTL3	Q96JM7	780 aa	Predicted RBP	10.24	□□□□□ -0.77
SPIDR-223	ENST00000524033	STRN4	Q9NRL3	753 aa		10.24	□□□□□ -0.77
SPIDR-223	ENST00000524033	CABP1	Q9NZU7	370 aa		10.24	□□□□□ -0.77
SPIDR-223	ENST00000524033	USP32	Q8NFA0	1604 aa		10.24	□□□□□ -0.77
SPIDR-223	ENST00000524033	SPATA31A5	Q5VU36	1347 aa		10.24	□□□□□ -0.77
SPIDR-223	ENST00000524033	SPATA31A7	Q8IWB4	1347 aa		10.24	□□□□□ -0.77
SPIDR-223	ENST00000524033	KDM2B	Q8NHM5	1336 aa		10.24	□□□□□ -0.77
SPIDR-223	ENST00000524033	POLR3A	O14802	1390 aa	Predicted RBP	10.24	□□□□□ -0.77
SPIDR-223	ENST00000524033	KIAA0232	Q92628	1395 aa		10.24	□□□□□ -0.77
SPIDR-223	ENST00000524033	TPRN	Q4KMQ1	711 aa		10.23	□□□□□ -0.77
SPIDR-223	ENST00000524033	DEFB132	Q7Z7B7	95 aa		10.23	□□□□□ -0.77
SPIDR-223	ENST00000524033	SP7	Q8TDD2	431 aa	Predicted RBP	10.23	□□□□□ -0.77
SPIDR-223	ENST00000524033	ATP7B	P35670	1465 aa		10.23	□□□□□ -0.77
SPIDR-223	ENST00000524033	TULP1	O00294	542 aa	Predicted RBP	10.22	□□□□□ -0.77
SPIDR-223	ENST00000524033	GC	P02774	474 aa		10.22	□□□□□ -0.77
SPIDR-223	ENST00000524033	CDCA7L	Q96GN5	454 aa		10.22	□□□□□ -0.77
SPIDR-223	ENST00000524033	CRISPLD2	Q9H0B8	497 aa		10.22	□□□□□ -0.77
SPIDR-223	ENST00000524033	GLI3	P10071	1580 aa		10.22	□□□□□ -0.77
SPIDR-223	ENST00000524033	FAM182B	Q5T319	152 aa		10.21	□□□□□ -0.77
SPIDR-223	ENST00000524033	CRBN	Q96SW2	442 aa		10.21	□□□□□ -0.77
SPIDR-223	ENST00000524033	USP35	Q9P2H5	1018 aa		10.21	□□□□□ -0.77
SPIDR-223	ENST00000524033	SPATA31A1	Q5TZJ5	1347 aa		10.21	□□□□□ -0.78
SPIDR-223	ENST00000524033	EVC2	Q86UK5	1308 aa		10.21	□□□□□ -0.78
SPIDR-223	ENST00000524033	SENP3-EIF4A1	A0A087X0R7	540 aa		10.2	□□□□□ -0.78
SPIDR-223	ENST00000524033	C7	P10643	843 aa		10.2	□□□□□ -0.78
SPIDR-223	ENST00000524033	CNGB1	Q14028	1251 aa	Predicted RBP	10.2	□□□□□ -0.78
SPIDR-223	ENST00000524033	PPIP5K1	Q6PFW1	1433 aa		10.2	□□□□□ -0.78
SPIDR-223	ENST00000524033	RGPD8	O14715	1765 aa	Predicted RBP	10.19	□□□□□ -0.78
SPIDR-223	ENST00000524033	PRKCSH	P14314	528 aa	Predicted RBP	10.19	□□□□□ -0.78
SPIDR-223	ENST00000524033	BAG6	P46379	1132 aa		10.19	□□□□□ -0.78
SPIDR-223	ENST00000524033	TMF1	P82094	1093 aa		10.19	□□□□□ -0.78
SPIDR-223	ENST00000524033	PPP1R15B	Q5SWA1	713 aa		10.19	□□□□□ -0.78
SPIDR-223	ENST00000524033	LARP1	Q6PKG0	1096 aa	Known RBP	10.19	□□□□□ -0.78
SPIDR-223	ENST00000524033	ARHGEF1	Q92888	912 aa	Known RBP	10.19	□□□□□ -0.78
SPIDR-223	ENST00000524033	PANK3	Q9H999	370 aa		10.19	□□□□□ -0.78
SPIDR-223	ENST00000524033	METRN	Q9UJH8	293 aa		10.19	□□□□□ -0.78
SPIDR-223	ENST00000524033	ZBTB7C	A1YPR0	619 aa		10.18	□□□□□ -0.78
SPIDR-223	ENST00000524033	MFSD10	Q14728	455 aa		10.18	□□□□□ -0.78
SPIDR-223	ENST00000524033	RTL5	Q5HYW3	569 aa	Predicted RBP	10.18	□□□□□ -0.78
SPIDR-223	ENST00000524033	DUSP27	Q5VZP5	1158 aa		10.18	□□□□□ -0.78
SPIDR-223	ENST00000524033	GPHN	Q9NQX3	736 aa	Predicted RBP	10.18	□□□□□ -0.78
SPIDR-223	ENST00000524033	CPD	O75976	1380 aa		10.17	□□□□□ -0.78
SPIDR-223	ENST00000524033	USP19	O94966	1318 aa		10.17	□□□□□ -0.78
SPIDR-223	ENST00000524033	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	10.17	□□□□□ -0.78
SPIDR-223	ENST00000524033	TRPM3	Q9HCF6	1732 aa	Predicted RBP	10.17	□□□□□ -0.78
SPIDR-223	ENST00000524033	MARF1	Q9Y4F3	1742 aa	Known RBP	10.17	□□□□□ -0.78
SPIDR-223	ENST00000524033	FAM196A	Q6ZSG2	479 aa		10.17	□□□□□ -0.78
SPIDR-223	ENST00000524033	BARGIN	Q6ZT62	677 aa		10.17	□□□□□ -0.78
SPIDR-223	ENST00000524033	TRMT2A	Q8IZ69	625 aa	Known RBP	10.17	□□□□□ -0.78
SPIDR-223	ENST00000524033	TCP11L2	Q8N4U5	519 aa		10.17	□□□□□ -0.78
SPIDR-223	ENST00000524033	PPM1G	O15355	546 aa	Predicted RBP	10.16	□□□□□ -0.78
SPIDR-223	ENST00000524033	PPP2R1A	P30153	589 aa		10.16	□□□□□ -0.78
SPIDR-223	ENST00000524033	EN1	Q05925	392 aa	Predicted RBP	10.16	□□□□□ -0.78
SPIDR-223	ENST00000524033	DDRGK1	Q96HY6	314 aa		10.16	□□□□□ -0.78
SPIDR-223	ENST00000524033	COLQ	Q9Y215	455 aa	Predicted RBP	10.16	□□□□□ -0.78
SPIDR-223	ENST00000524033	THRAP3	Q9Y2W1	955 aa	Known RBP	10.16	□□□□□ -0.78
SPIDR-223	ENST00000524033	ALS2	Q96Q42	1657 aa		10.15	□□□□□ -0.78

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