RNA–Protein interactions for RNA: ENST00000523896.1

PCM1-220, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-220ENST00000523896 EIF4G2P78344 907 aaKnown RBP eCLIP7.54□□□□□ -1.2
PCM1-220ENST00000523896 WASHC4Q2M389 1173 aa7.54□□□□□ -1.2
PCM1-220ENST00000523896 ARID3CA6NKF2 412 aa7.53□□□□□ -1.2
PCM1-220ENST00000523896 PPFIA3O75145 1194 aa7.53□□□□□ -1.2
PCM1-220ENST00000523896 GMPRP36959 345 aa7.53□□□□□ -1.2
PCM1-220ENST00000523896 PTGIRP43119 386 aa7.53□□□□□ -1.2
PCM1-220ENST00000523896 STK17AQ9UEE5 414 aa7.53□□□□□ -1.2
PCM1-220ENST00000523896 PCDHB11Q9Y5F2 797 aa7.53□□□□□ -1.2
PCM1-220ENST00000523896 ATP5J2-PTCD1G3V325 749 aa7.52□□□□□ -1.21
PCM1-220ENST00000523896 LILRA1O75019 489 aa7.52□□□□□ -1.21
PCM1-220ENST00000523896 CTSOP43234 321 aaPredicted RBP7.52□□□□□ -1.21
PCM1-220ENST00000523896 PTSQ03393 145 aa7.52□□□□□ -1.21
PCM1-220ENST00000523896 CC2D2BQ6DHV5 1058 aa7.52□□□□□ -1.21
PCM1-220ENST00000523896 CYP2U1Q7Z449 544 aa7.52□□□□□ -1.21
PCM1-220ENST00000523896 ZNF777Q9ULD5 760 aaPredicted RBP7.52□□□□□ -1.21
PCM1-220ENST00000523896 MYCP01106 439 aaPredicted RBP7.51□□□□□ -1.21
PCM1-220ENST00000523896 ADD1P35611 737 aaKnown RBP7.51□□□□□ -1.21
PCM1-220ENST00000523896 NLRP3Q96P20 1036 aa7.51□□□□□ -1.21
PCM1-220ENST00000523896 POM121CA8CG34 1229 aa7.5□□□□□ -1.21
PCM1-220ENST00000523896 MEN1O00255 615 aa7.5□□□□□ -1.21
PCM1-220ENST00000523896 ERBB4Q15303 1308 aa7.5□□□□□ -1.21
PCM1-220ENST00000523896 VSIG8P0DPA2 414 aa7.49□□□□□ -1.21
PCM1-220ENST00000523896 VAC14Q08AM6 782 aa7.49□□□□□ -1.21
PCM1-220ENST00000523896 LYSMD3Q7Z3D4 306 aa7.49□□□□□ -1.21
PCM1-220ENST00000523896 RNF217Q8TC41 542 aa7.49□□□□□ -1.21
PCM1-220ENST00000523896 SOX11P35716 441 aa7.48□□□□□ -1.21
PCM1-220ENST00000523896 ERVK-9P63128 1117 aa7.48□□□□□ -1.21
PCM1-220ENST00000523896 SLFNL1Q499Z3 407 aa7.48□□□□□ -1.21
PCM1-220ENST00000523896 CCDC155Q8N6L0 562 aa7.48□□□□□ -1.21
PCM1-220ENST00000523896 ZSCAN1Q8NBB4 408 aa7.48□□□□□ -1.21
PCM1-220ENST00000523896 SLC27A3Q5K4L6 730 aa7.47□□□□□ -1.21
PCM1-220ENST00000523896 LCE2CQ5TA81 110 aa7.47□□□□□ -1.21
PCM1-220ENST00000523896 GLMNQ92990 594 aa7.47□□□□□ -1.21
PCM1-220ENST00000523896 CEP126Q9P2H0 1117 aa7.47□□□□□ -1.21
PCM1-220ENST00000523896 CDC14CA4D256 554 aa7.46□□□□□ -1.22
PCM1-220ENST00000523896 GTF2E1P29083 439 aaPredicted RBP7.46□□□□□ -1.22
PCM1-220ENST00000523896 GPC1P35052 558 aa7.46□□□□□ -1.22
PCM1-220ENST00000523896 PRICKLE2Q7Z3G6 844 aa7.46□□□□□ -1.22
PCM1-220ENST00000523896 CCDC82Q8N4S0 544 aa7.46□□□□□ -1.22
PCM1-220ENST00000523896 ADAMTS19Q8TE59 1207 aa7.46□□□□□ -1.22
PCM1-220ENST00000523896 A0A1W2PRU2 124 aa7.45□□□□□ -1.22
PCM1-220ENST00000523896 SLC35F4A4IF30 521 aa7.45□□□□□ -1.22
PCM1-220ENST00000523896 ITGA6P23229 1130 aa7.45□□□□□ -1.22
PCM1-220ENST00000523896 RNF144AP50876 292 aaPredicted RBP7.45□□□□□ -1.22
PCM1-220ENST00000523896 FOXD4L5Q5VV16 416 aaPredicted RBP7.45□□□□□ -1.22
PCM1-220ENST00000523896 RNF135Q8IUD6 432 aa7.45□□□□□ -1.22
PCM1-220ENST00000523896 SIRT1Q96EB6 747 aa7.45□□□□□ -1.22
PCM1-220ENST00000523896 CALR3Q96L12 384 aaKnown RBP7.45□□□□□ -1.22
PCM1-220ENST00000523896 SERPINA10Q9UK55 444 aa7.45□□□□□ -1.22
PCM1-220ENST00000523896 DOLKQ9UPQ8 538 aa7.45□□□□□ -1.22
PCM1-220ENST00000523896 SEMA3FQ13275 785 aa7.44□□□□□ -1.22
PCM1-220ENST00000523896 SV2AQ7L0J3 742 aa7.44□□□□□ -1.22
PCM1-220ENST00000523896 CCDC97Q96F63 343 aaPredicted RBP7.44□□□□□ -1.22
PCM1-220ENST00000523896 ALG2Q9H553 416 aa7.44□□□□□ -1.22
PCM1-220ENST00000523896 GNRH1P01148 92 aa7.43□□□□□ -1.22
PCM1-220ENST00000523896 SCTRP47872 440 aa7.43□□□□□ -1.22
PCM1-220ENST00000523896 USP4Q13107 963 aa7.43□□□□□ -1.22
PCM1-220ENST00000523896 CLN3Q13286 438 aa7.43□□□□□ -1.22
PCM1-220ENST00000523896 HDGFL1Q5TGJ6 251 aa7.43□□□□□ -1.22
PCM1-220ENST00000523896 KDF1Q8NAX2 398 aaPredicted RBP7.43□□□□□ -1.22
PCM1-220ENST00000523896 ARHGEF10LQ9HCE6 1279 aa7.43□□□□□ -1.22
PCM1-220ENST00000523896 RHOQP17081 205 aa7.42□□□□□ -1.22
PCM1-220ENST00000523896 OXLD1Q5BKU9 147 aa7.42□□□□□ -1.22
PCM1-220ENST00000523896 ESCO1Q5FWF5 840 aa7.42□□□□□ -1.22
PCM1-220ENST00000523896 VWA5B2Q8N398 1253 aa7.42□□□□□ -1.22
PCM1-220ENST00000523896 NANOS1Q8WY41 292 aaKnown RBP7.42□□□□□ -1.22
PCM1-220ENST00000523896 ARID3AQ99856 593 aa7.42□□□□□ -1.22
PCM1-220ENST00000523896 OSBPL3Q9H4L5 887 aa7.42□□□□□ -1.22
PCM1-220ENST00000523896 FOXR1Q6PIV2 292 aa7.41□□□□□ -1.22
PCM1-220ENST00000523896 CCDC85AQ96PX6 553 aaPredicted RBP7.41□□□□□ -1.22
PCM1-220ENST00000523896 RIPOR1Q6ZS17 1223 aa7.4□□□□□ -1.22
PCM1-220ENST00000523896 CNTNAP3BQ96NU0 1288 aa7.4□□□□□ -1.22
PCM1-220ENST00000523896 COL25A1Q9BXS0 654 aaPredicted RBP7.4□□□□□ -1.22
PCM1-220ENST00000523896 CNTNAP3Q9BZ76 1288 aa7.4□□□□□ -1.22
PCM1-220ENST00000523896 RAB6BQ9NRW1 208 aa7.4□□□□□ -1.22
PCM1-220ENST00000523896 H7C1W4 665 aa7.39□□□□□ -1.23
PCM1-220ENST00000523896 MAP7D1Q3KQU3 841 aa7.39□□□□□ -1.23
PCM1-220ENST00000523896 TAS1R3Q7RTX0 852 aa7.39□□□□□ -1.23
PCM1-220ENST00000523896 CNKSR1Q969H4 720 aa7.39□□□□□ -1.23
PCM1-220ENST00000523896 GMCL1Q96IK5 515 aa7.39□□□□□ -1.23
PCM1-220ENST00000523896 ARXQ96QS3 562 aa7.39□□□□□ -1.23
PCM1-220ENST00000523896 UCN2Q96RP3 112 aa7.39□□□□□ -1.23
PCM1-220ENST00000523896 GAS2L1Q99501 681 aaPredicted RBP7.39□□□□□ -1.23
PCM1-220ENST00000523896 CDCA7Q9BWT1 371 aaPredicted RBP7.39□□□□□ -1.23
PCM1-220ENST00000523896 SENP3-EIF4A1A0A087X0R7 540 aa7.38□□□□□ -1.23
PCM1-220ENST00000523896 POU4F2Q12837 409 aa7.38□□□□□ -1.23
PCM1-220ENST00000523896 GNASQ5JWF2 1037 aa7.38□□□□□ -1.23
PCM1-220ENST00000523896 TMEM214Q6NUQ4 689 aaKnown RBP7.38□□□□□ -1.23
PCM1-220ENST00000523896 ESYT1Q9BSJ8 1104 aa7.38□□□□□ -1.23
PCM1-220ENST00000523896 DYRK1BQ9Y463 629 aa7.38□□□□□ -1.23
PCM1-220ENST00000523896 WASLO00401 505 aaPredicted RBP7.37□□□□□ -1.23
PCM1-220ENST00000523896 WDR44Q5JSH3 913 aa7.37□□□□□ -1.23
PCM1-220ENST00000523896 NBPF10Q6P3W6 841 aaKnown RBP7.37□□□□□ -1.23
PCM1-220ENST00000523896 NBPF15Q8N660 670 aa7.37□□□□□ -1.23
PCM1-220ENST00000523896 ZSCAN10Q96SZ4 725 aaPredicted RBP7.37□□□□□ -1.23
PCM1-220ENST00000523896 GRIP2Q9C0E4 1043 aa7.37□□□□□ -1.23
PCM1-220ENST00000523896 TIMMDC1Q9NPL8 285 aa7.37□□□□□ -1.23
PCM1-220ENST00000523896 SPATA31C2B4DYI2 1134 aa7.36□□□□□ -1.23
PCM1-220ENST00000523896 GPR161Q8N6U8 529 aaKnown RBP7.36□□□□□ -1.23
PCM1-220ENST00000523896 PLPP7Q8NBV4 271 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms