RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 NAP1L2Q9ULW6 460 aaPredicted RBP10.83□□□□□ -0.68
CSMD1-212ENST00000523387 MAP4K4O95819 1239 aaPredicted RBP10.83□□□□□ -0.68
CSMD1-212ENST00000523387 GNAI2P04899 355 aa10.83□□□□□ -0.68
CSMD1-212ENST00000523387 GIMAP6Q6P9H5 292 aa10.83□□□□□ -0.68
CSMD1-212ENST00000523387 CGNQ9P2M7 1197 aaKnown RBP10.83□□□□□ -0.68
CSMD1-212ENST00000523387 NCOA3Q9Y6Q9 1424 aa10.83□□□□□ -0.68
CSMD1-212ENST00000523387 GTPBP4Q9BZE4 634 aaKnown RBP10.83□□□□□ -0.68
CSMD1-212ENST00000523387 NSFL1CQ9UNZ2 370 aaKnown RBP10.83□□□□□ -0.68
CSMD1-212ENST00000523387 ZNF518AQ6AHZ1 1483 aa10.82□□□□□ -0.68
CSMD1-212ENST00000523387 CDC42BPAQ5VT25 1732 aa10.82□□□□□ -0.68
CSMD1-212ENST00000523387 BECN2A8MW95 431 aa10.82□□□□□ -0.68
CSMD1-212ENST00000523387 MEIS3Q99687 375 aa10.82□□□□□ -0.68
CSMD1-212ENST00000523387 CDK19Q9BWU1 502 aa10.82□□□□□ -0.68
CSMD1-212ENST00000523387 SAMD9LQ8IVG5 1584 aa10.82□□□□□ -0.68
CSMD1-212ENST00000523387 PHACTR3Q96KR7 559 aa10.82□□□□□ -0.68
CSMD1-212ENST00000523387 C16orf45Q96MC5 204 aaPredicted RBP10.82□□□□□ -0.68
CSMD1-212ENST00000523387 TSPYL4Q9UJ04 414 aa10.82□□□□□ -0.68
CSMD1-212ENST00000523387 CNPY2Q9Y2B0 182 aa10.82□□□□□ -0.68
CSMD1-212ENST00000523387 HTATSF1O43719 755 aaKnown RBP10.82□□□□□ -0.68
CSMD1-212ENST00000523387 MX1P20591 662 aa10.82□□□□□ -0.68
CSMD1-212ENST00000523387 CLEC17AQ6ZS10 378 aa10.82□□□□□ -0.68
CSMD1-212ENST00000523387 RTEL1-TNFRSF6BF6WH68 1400 aa10.81□□□□□ -0.68
CSMD1-212ENST00000523387 GADD45BO75293 160 aaPredicted RBP10.81□□□□□ -0.68
CSMD1-212ENST00000523387 IL1RAPL2Q9NP60 686 aa10.81□□□□□ -0.68
CSMD1-212ENST00000523387 EMILIN1Q9Y6C2 1016 aa10.81□□□□□ -0.68
CSMD1-212ENST00000523387 NPHP1O15259 732 aa10.81□□□□□ -0.68
CSMD1-212ENST00000523387 PLEKHG5O94827 1062 aa10.81□□□□□ -0.68
CSMD1-212ENST00000523387 PDE1AP54750 535 aa10.81□□□□□ -0.68
CSMD1-212ENST00000523387 LAMC1P11047 1609 aa10.81□□□□□ -0.68
CSMD1-212ENST00000523387 F6X3S4 739 aa10.81□□□□□ -0.68
CSMD1-212ENST00000523387 SIRT2Q8IXJ6 389 aa10.81□□□□□ -0.68
CSMD1-212ENST00000523387 ZKSCAN1P17029 563 aaPredicted RBP10.8□□□□□ -0.68
CSMD1-212ENST00000523387 RRS1Q15050 365 aaKnown RBP10.8□□□□□ -0.68
CSMD1-212ENST00000523387 CAMK4Q16566 473 aa10.8□□□□□ -0.68
CSMD1-212ENST00000523387 CEP85Q6P2H3 762 aa10.8□□□□□ -0.68
CSMD1-212ENST00000523387 PLEKHF1Q96S99 279 aa10.8□□□□□ -0.68
CSMD1-212ENST00000523387 RPGRIP1LQ68CZ1 1315 aa10.8□□□□□ -0.68
CSMD1-212ENST00000523387 GNAI3P08754 354 aa10.8□□□□□ -0.68
CSMD1-212ENST00000523387 UBE2HP62256 183 aa10.8□□□□□ -0.68
CSMD1-212ENST00000523387 SULT6B1Q6IMI4 303 aa10.8□□□□□ -0.68
CSMD1-212ENST00000523387 JARID2Q92833 1246 aaPredicted RBP10.8□□□□□ -0.68
CSMD1-212ENST00000523387 ESYT1Q9BSJ8 1104 aa10.8□□□□□ -0.68
CSMD1-212ENST00000523387 TAOK2Q9UL54 1235 aa10.8□□□□□ -0.68
CSMD1-212ENST00000523387 PLXNC1O60486 1568 aa10.8□□□□□ -0.68
CSMD1-212ENST00000523387 CCDC66A2RUB6 948 aa10.8□□□□□ -0.68
CSMD1-212ENST00000523387 ATP10AO60312 1499 aa10.8□□□□□ -0.68
CSMD1-212ENST00000523387 SURF6O75683 361 aaKnown RBP10.8□□□□□ -0.68
CSMD1-212ENST00000523387 TTC37Q6PGP7 1564 aa10.8□□□□□ -0.68
CSMD1-212ENST00000523387 BRD1O95696 1058 aa10.79□□□□□ -0.68
CSMD1-212ENST00000523387 DMTNQ08495 405 aa10.79□□□□□ -0.68
CSMD1-212ENST00000523387 RUFY2Q8WXA3 655 aa10.79□□□□□ -0.68
CSMD1-212ENST00000523387 NUP62CLQ9H1M0 184 aa10.79□□□□□ -0.68
CSMD1-212ENST00000523387 TNMDQ9H2S6 317 aa10.79□□□□□ -0.68
CSMD1-212ENST00000523387 BCL2L12Q9HB09 334 aa10.79□□□□□ -0.68
CSMD1-212ENST00000523387 U2AF2P26368 475 aaKnown RBP eCLIP10.79□□□□□ -0.68
CSMD1-212ENST00000523387 TNNT3P45378 269 aaPredicted RBP10.79□□□□□ -0.68
CSMD1-212ENST00000523387 CCT4P50991 539 aaKnown RBP10.79□□□□□ -0.68
CSMD1-212ENST00000523387 MCM10Q7L590 875 aa10.79□□□□□ -0.68
CSMD1-212ENST00000523387 FERMT3Q86UX7 667 aa10.79□□□□□ -0.68
CSMD1-212ENST00000523387 A0A1W2PP64 1363 aa10.79□□□□□ -0.68
CSMD1-212ENST00000523387 NUTM2FA1L443 756 aa10.79□□□□□ -0.68
CSMD1-212ENST00000523387 STX6O43752 255 aa10.79□□□□□ -0.68
CSMD1-212ENST00000523387 CCDC83Q8IWF9 413 aa10.79□□□□□ -0.68
CSMD1-212ENST00000523387 PLCH2O75038 1416 aa10.79□□□□□ -0.68
CSMD1-212ENST00000523387 RIOK3O14730 519 aaKnown RBP10.78□□□□□ -0.68
CSMD1-212ENST00000523387 KDM4AO75164 1064 aa10.78□□□□□ -0.68
CSMD1-212ENST00000523387 TNNT1P13805 278 aa10.78□□□□□ -0.68
CSMD1-212ENST00000523387 HSP90B1P14625 803 aaKnown RBP10.78□□□□□ -0.68
CSMD1-212ENST00000523387 KRT85P78386 507 aa10.78□□□□□ -0.68
CSMD1-212ENST00000523387 MAP3K11Q16584 847 aa10.78□□□□□ -0.68
CSMD1-212ENST00000523387 GPATCH3Q96I76 525 aa10.78□□□□□ -0.68
CSMD1-212ENST00000523387 ESF1Q9H501 851 aaKnown RBP10.78□□□□□ -0.68
CSMD1-212ENST00000523387 MIS18AQ9NYP9 233 aa10.78□□□□□ -0.68
CSMD1-212ENST00000523387 SBNO2Q9Y2G9 1366 aa10.78□□□□□ -0.68
CSMD1-212ENST00000523387 KIF20AO95235 890 aa10.78□□□□□ -0.68
CSMD1-212ENST00000523387 UBTFL1P0CB47 393 aaPredicted RBP10.78□□□□□ -0.68
CSMD1-212ENST00000523387 KRT24Q2M2I5 525 aa10.78□□□□□ -0.68
CSMD1-212ENST00000523387 BBXQ8WY36 941 aaPredicted RBP10.78□□□□□ -0.68
CSMD1-212ENST00000523387 FBXW7Q969H0 707 aa10.78□□□□□ -0.68
CSMD1-212ENST00000523387 ERICH4A6NGS2 130 aa10.78□□□□□ -0.68
CSMD1-212ENST00000523387 H3BQV1 296 aa10.78□□□□□ -0.68
CSMD1-212ENST00000523387 IFFO2Q5TF58 517 aa10.78□□□□□ -0.68
CSMD1-212ENST00000523387 NUTM1Q86Y26 1132 aa10.78□□□□□ -0.68
CSMD1-212ENST00000523387 INTS4Q96HW7 963 aaKnown RBP10.78□□□□□ -0.68
CSMD1-212ENST00000523387 ZSCAN22P10073 491 aaPredicted RBP10.77□□□□□ -0.68
CSMD1-212ENST00000523387 MAPK8IP2Q13387 824 aaPredicted RBP10.77□□□□□ -0.68
CSMD1-212ENST00000523387 CKAP2LQ8IYA6 745 aa10.77□□□□□ -0.68
CSMD1-212ENST00000523387 CNTROBQ8N137 903 aa10.77□□□□□ -0.68
CSMD1-212ENST00000523387 TAF3Q5VWG9 929 aa10.77□□□□□ -0.69
CSMD1-212ENST00000523387 C14orf37Q86TY3 774 aa10.77□□□□□ -0.69
CSMD1-212ENST00000523387 SRCIN1Q9C0H9 1055 aa10.77□□□□□ -0.69
CSMD1-212ENST00000523387 ABCC4O15439 1325 aa10.77□□□□□ -0.69
CSMD1-212ENST00000523387 CASTP20810 708 aaKnown RBP10.77□□□□□ -0.69
CSMD1-212ENST00000523387 LARP1BQ659C4 914 aaKnown RBP10.77□□□□□ -0.69
CSMD1-212ENST00000523387 CWC27Q6UX04 472 aaKnown RBP10.77□□□□□ -0.69
CSMD1-212ENST00000523387 AEBP1Q8IUX7 1158 aa10.77□□□□□ -0.69
CSMD1-212ENST00000523387 DDX54Q8TDD1 881 aaKnown RBP10.77□□□□□ -0.69
CSMD1-212ENST00000523387 ZDHHC9Q9Y397 364 aa10.77□□□□□ -0.69
CSMD1-212ENST00000523387 LIMCH1Q9UPQ0 1083 aa10.76□□□□□ -0.69
CSMD1-212ENST00000523387 CYP2E1P05181 493 aaPredicted RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms