RNA–Protein interactions for RNA: ENST00000523334.1

HDAC2-215, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 4,810 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-215ENST00000523334 MRPL50Q8N5N7 158 aaKnown RBP4.84□□□□□ -1.63
HDAC2-215ENST00000523334 PRDM11Q9NQV5 511 aa4.84□□□□□ -1.63
HDAC2-215ENST00000523334 ARXQ96QS3 562 aa4.84□□□□□ -1.63
HDAC2-215ENST00000523334 CD163L1Q9NR16 1453 aa4.84□□□□□ -1.63
HDAC2-215ENST00000523334 MSH6P52701 1360 aa4.84□□□□□ -1.63
HDAC2-215ENST00000523334 KDM2BQ8NHM5 1336 aa4.84□□□□□ -1.63
HDAC2-215ENST00000523334 CHL1O00533 1208 aa4.84□□□□□ -1.63
HDAC2-215ENST00000523334 ANKRD24Q8TF21 1146 aa4.84□□□□□ -1.63
HDAC2-215ENST00000523334 ARHGEF10O15013 1369 aa4.84□□□□□ -1.64
HDAC2-215ENST00000523334 CDC42BPGQ6DT37 1551 aa4.84□□□□□ -1.64
HDAC2-215ENST00000523334 PTPRUQ92729 1446 aa4.84□□□□□ -1.64
HDAC2-215ENST00000523334 PTPRCP08575 1304 aa4.83□□□□□ -1.64
HDAC2-215ENST00000523334 DDX58O95786 925 aaKnown RBP4.83□□□□□ -1.64
HDAC2-215ENST00000523334 HDAC1Q13547 482 aaPredicted RBP4.83□□□□□ -1.64
HDAC2-215ENST00000523334 HSCBQ8IWL3 235 aa4.83□□□□□ -1.64
HDAC2-215ENST00000523334 RPAP2Q8IXW5 612 aaPredicted RBP4.83□□□□□ -1.64
HDAC2-215ENST00000523334 SPG7Q9UQ90 795 aa4.83□□□□□ -1.64
HDAC2-215ENST00000523334 USP32Q8NFA0 1604 aa4.83□□□□□ -1.64
HDAC2-215ENST00000523334 BTBD11A6QL63 1104 aa4.83□□□□□ -1.64
HDAC2-215ENST00000523334 KRT24Q2M2I5 525 aa4.83□□□□□ -1.64
HDAC2-215ENST00000523334 CHD1LQ86WJ1 897 aa4.83□□□□□ -1.64
HDAC2-215ENST00000523334 GNAI2P04899 355 aa4.83□□□□□ -1.64
HDAC2-215ENST00000523334 UBTFL1P0CB47 393 aaPredicted RBP4.83□□□□□ -1.64
HDAC2-215ENST00000523334 MPRIPQ6WCQ1 1025 aa4.83□□□□□ -1.64
HDAC2-215ENST00000523334 ZBTB40Q9NUA8 1239 aa4.83□□□□□ -1.64
HDAC2-215ENST00000523334 C9orf78Q9NZ63 289 aaPredicted RBP4.83□□□□□ -1.64
HDAC2-215ENST00000523334 ARHGAP23Q9P227 1491 aa4.83□□□□□ -1.64
HDAC2-215ENST00000523334 NEXNQ0ZGT2 675 aa4.83□□□□□ -1.64
HDAC2-215ENST00000523334 LRRC59Q96AG4 307 aaKnown RBP4.83□□□□□ -1.64
HDAC2-215ENST00000523334 CPS1P31327 1500 aa4.83□□□□□ -1.64
HDAC2-215ENST00000523334 KIF24Q5T7B8 1368 aa4.82□□□□□ -1.64
HDAC2-215ENST00000523334 IGSF1Q8N6C5 1336 aa4.82□□□□□ -1.64
HDAC2-215ENST00000523334 SLC4A3P48751 1232 aa4.82□□□□□ -1.64
HDAC2-215ENST00000523334 MAP3K5Q99683 1374 aa4.82□□□□□ -1.64
HDAC2-215ENST00000523334 FER1L4A9Z1Z3 1794 aa4.82□□□□□ -1.64
HDAC2-215ENST00000523334 SLIT1O75093 1534 aa4.82□□□□□ -1.64
HDAC2-215ENST00000523334 F6X3S4 739 aa4.82□□□□□ -1.64
HDAC2-215ENST00000523334 ZNF853P0CG23 659 aa4.82□□□□□ -1.64
HDAC2-215ENST00000523334 FLIIQ13045 1269 aa4.82□□□□□ -1.64
HDAC2-215ENST00000523334 TOM1L2Q6ZVM7 507 aa4.82□□□□□ -1.64
HDAC2-215ENST00000523334 SRCIN1Q9C0H9 1055 aa4.82□□□□□ -1.64
HDAC2-215ENST00000523334 USP31Q70CQ4 1352 aa4.82□□□□□ -1.64
HDAC2-215ENST00000523334 ADGRL3Q9HAR2 1447 aa4.82□□□□□ -1.64
HDAC2-215ENST00000523334 HSP90AB1P08238 724 aaKnown RBP4.82□□□□□ -1.64
HDAC2-215ENST00000523334 CEP170BQ9Y4F5 1589 aaPredicted RBP4.82□□□□□ -1.64
HDAC2-215ENST00000523334 TMEM94Q12767 1356 aa4.81□□□□□ -1.64
HDAC2-215ENST00000523334 AKAP4Q5JQC9 854 aa4.81□□□□□ -1.64
HDAC2-215ENST00000523334 NBPF6Q5VWK0 638 aa4.81□□□□□ -1.64
HDAC2-215ENST00000523334 NBPF4Q96M43 638 aa4.81□□□□□ -1.64
HDAC2-215ENST00000523334 SLKQ9H2G2 1235 aaPredicted RBP4.81□□□□□ -1.64
HDAC2-215ENST00000523334 LRRC7Q96NW7 1537 aa4.81□□□□□ -1.64
HDAC2-215ENST00000523334 OVOS2A0A0J9YW53 1432 aa4.81□□□□□ -1.64
HDAC2-215ENST00000523334 OVOS2Q6IE36 1432 aa4.81□□□□□ -1.64
HDAC2-215ENST00000523334 IQSEC2Q5JU85 1478 aa4.81□□□□□ -1.64
HDAC2-215ENST00000523334 CHRNA2Q15822 529 aa4.81□□□□□ -1.64
HDAC2-215ENST00000523334 SMC5Q8IY18 1101 aa4.81□□□□□ -1.64
HDAC2-215ENST00000523334 STRN4Q9NRL3 753 aa4.81□□□□□ -1.64
HDAC2-215ENST00000523334 ZNF330Q9Y3S2 320 aaPredicted RBP4.81□□□□□ -1.64
HDAC2-215ENST00000523334 UBR1Q8IWV7 1749 aa4.81□□□□□ -1.64
HDAC2-215ENST00000523334 KIAA0232Q92628 1395 aa4.81□□□□□ -1.64
HDAC2-215ENST00000523334 TRIM6-TRIM34B2RNG4 842 aa4.81□□□□□ -1.64
HDAC2-215ENST00000523334 MSH5O43196 834 aa4.81□□□□□ -1.64
HDAC2-215ENST00000523334 AIMP1Q12904 312 aaKnown RBP4.81□□□□□ -1.64
HDAC2-215ENST00000523334 C22orf23Q9BZE7 217 aa4.81□□□□□ -1.64
HDAC2-215ENST00000523334 BABAM1Q9NWV8 329 aa4.81□□□□□ -1.64
HDAC2-215ENST00000523334 MCCP23508 829 aa4.81□□□□□ -1.64
HDAC2-215ENST00000523334 BRPF1P55201 1214 aaPredicted RBP4.81□□□□□ -1.64
HDAC2-215ENST00000523334 RIC3Q7Z5B4 369 aa4.81□□□□□ -1.64
HDAC2-215ENST00000523334 CABLES1Q8TDN4 633 aa4.81□□□□□ -1.64
HDAC2-215ENST00000523334 RIMS1Q86UR5 1692 aaKnown RBP4.81□□□□□ -1.64
HDAC2-215ENST00000523334 ZBTB7BO15156 539 aaPredicted RBP4.8□□□□□ -1.64
HDAC2-215ENST00000523334 CABP4P57796 275 aa4.8□□□□□ -1.64
HDAC2-215ENST00000523334 HSP90AB4PQ58FF6 505 aa4.8□□□□□ -1.64
HDAC2-215ENST00000523334 USP35Q9P2H5 1018 aa4.8□□□□□ -1.64
HDAC2-215ENST00000523334 SOS1Q07889 1333 aaPredicted RBP4.8□□□□□ -1.64
HDAC2-215ENST00000523334 RTL1A6NKG5 1358 aa4.8□□□□□ -1.64
HDAC2-215ENST00000523334 DIP2AQ14689 1571 aa4.8□□□□□ -1.64
HDAC2-215ENST00000523334 CDC45O75419 566 aa4.8□□□□□ -1.64
HDAC2-215ENST00000523334 ARHGEF25Q86VW2 580 aa4.8□□□□□ -1.64
HDAC2-215ENST00000523334 SPRYD3Q8NCJ5 442 aa4.8□□□□□ -1.64
HDAC2-215ENST00000523334 DBF4Q9UBU7 674 aaPredicted RBP4.8□□□□□ -1.64
HDAC2-215ENST00000523334 COL3A1P02461 1466 aaPredicted RBP4.8□□□□□ -1.64
HDAC2-215ENST00000523334 SURF6O75683 361 aaKnown RBP4.8□□□□□ -1.64
HDAC2-215ENST00000523334 IFNL2Q8IZJ0 200 aa4.8□□□□□ -1.64
HDAC2-215ENST00000523334 GPATCH3Q96I76 525 aa4.8□□□□□ -1.64
HDAC2-215ENST00000523334 MEIS3Q99687 375 aa4.8□□□□□ -1.64
HDAC2-215ENST00000523334 C8orf34Q49A92 452 aa4.8□□□□□ -1.64
HDAC2-215ENST00000523334 INTS3Q68E01 1043 aaKnown RBP4.8□□□□□ -1.64
HDAC2-215ENST00000523334 IL17REQ8NFR9 667 aa4.8□□□□□ -1.64
HDAC2-215ENST00000523334 CCDC9Q9Y3X0 531 aaKnown RBP4.8□□□□□ -1.64
HDAC2-215ENST00000523334 REC8O95072 547 aa4.79□□□□□ -1.64
HDAC2-215ENST00000523334 NUCB1Q02818 461 aa4.79□□□□□ -1.64
HDAC2-215ENST00000523334 ANKRD44Q8N8A2 993 aa4.79□□□□□ -1.64
HDAC2-215ENST00000523334 C3P01024 1663 aa4.79□□□□□ -1.64
HDAC2-215ENST00000523334 MAP2P11137 1827 aaKnown RBP4.79□□□□□ -1.64
HDAC2-215ENST00000523334 KIAA1211Q6ZU35 1233 aa4.79□□□□□ -1.64
HDAC2-215ENST00000523334 DDX54Q8TDD1 881 aaKnown RBP4.79□□□□□ -1.64
HDAC2-215ENST00000523334 DNAAF4Q8WXU2 420 aa4.79□□□□□ -1.64
HDAC2-215ENST00000523334 DDX17Q92841 729 aaKnown RBP4.79□□□□□ -1.64
HDAC2-215ENST00000523334 RILPL2Q969X0 211 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms