RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 DDX54Q8TDD1 881 aaKnown RBP17.13■□□□□ 0.33
VEGFA-223ENST00000523125 ANO8Q9HCE9 1232 aaPredicted RBP17.13■□□□□ 0.33
VEGFA-223ENST00000523125 USHBP1Q8N6Y0 703 aa17.12■□□□□ 0.33
VEGFA-223ENST00000523125 SMG6Q86US8 1419 aaKnown RBP17.12■□□□□ 0.33
VEGFA-223ENST00000523125 ZCRB1Q8TBF4 217 aaKnown RBP17.11■□□□□ 0.33
VEGFA-223ENST00000523125 PANK3Q9H999 370 aa17.11■□□□□ 0.33
VEGFA-223ENST00000523125 PAPPAQ13219 1627 aa17.1■□□□□ 0.33
VEGFA-223ENST00000523125 NCAPD2Q15021 1401 aa17.09■□□□□ 0.33
VEGFA-223ENST00000523125 LY75O60449 1722 aa17.09■□□□□ 0.33
VEGFA-223ENST00000523125 PKD1L3Q7Z443 1732 aa17.09■□□□□ 0.33
VEGFA-223ENST00000523125 WASHC2AQ641Q2 1341 aa17.08■□□□□ 0.32
VEGFA-223ENST00000523125 POLKQ9UBT6 870 aa17.08■□□□□ 0.32
VEGFA-223ENST00000523125 PPM1GO15355 546 aaPredicted RBP17.07■□□□□ 0.32
VEGFA-223ENST00000523125 RAPGEF4Q8WZA2 1011 aa17.07■□□□□ 0.32
VEGFA-223ENST00000523125 PDGFDQ9GZP0 370 aaPredicted RBP17.07■□□□□ 0.32
VEGFA-223ENST00000523125 NSD2O96028 1365 aa17.06■□□□□ 0.32
VEGFA-223ENST00000523125 ITGB4P16144 1822 aa17.06■□□□□ 0.32
VEGFA-223ENST00000523125 PRIM1P49642 420 aaKnown RBP17.06■□□□□ 0.32
VEGFA-223ENST00000523125 TATP17735 454 aaPredicted RBP17.05■□□□□ 0.32
VEGFA-223ENST00000523125 SLC15A2Q16348 729 aa17.05■□□□□ 0.32
VEGFA-223ENST00000523125 LRRC4BQ9NT99 713 aa17.05■□□□□ 0.32
VEGFA-223ENST00000523125 TOGARAM1Q9Y4F4 1720 aa17.04■□□□□ 0.32
VEGFA-223ENST00000523125 TNNT2P45379 298 aaPredicted RBP17.04■□□□□ 0.32
VEGFA-223ENST00000523125 QSER1Q2KHR3 1735 aa17.04■□□□□ 0.32
VEGFA-223ENST00000523125 TUBGCP6Q96RT7 1819 aa17.03■□□□□ 0.32
VEGFA-223ENST00000523125 KIF7Q2M1P5 1343 aa17.03■□□□□ 0.32
VEGFA-223ENST00000523125 EYA1Q99502 592 aa17.03■□□□□ 0.32
VEGFA-223ENST00000523125 SPON1Q9HCB6 807 aa17.03■□□□□ 0.32
VEGFA-223ENST00000523125 SYTL4Q96C24 671 aaPredicted RBP17.02■□□□□ 0.32
VEGFA-223ENST00000523125 STK32BQ9NY57 414 aa17.02■□□□□ 0.32
VEGFA-223ENST00000523125 PCDH11XQ9BZA7 1347 aa17.01■□□□□ 0.31
VEGFA-223ENST00000523125 PCDH11YQ9BZA8 1340 aa17.01■□□□□ 0.31
VEGFA-223ENST00000523125 CYP27B1O15528 508 aa17.01■□□□□ 0.31
VEGFA-223ENST00000523125 EIF4A2Q14240 407 aaKnown RBP17■□□□□ 0.31
VEGFA-223ENST00000523125 TAF1LQ8IZX4 1826 aa16.99■□□□□ 0.31
VEGFA-223ENST00000523125 KCNQ4P56696 695 aa16.99■□□□□ 0.31
VEGFA-223ENST00000523125 ZNF827Q17R98 1081 aa16.99■□□□□ 0.31
VEGFA-223ENST00000523125 SLC27A3Q5K4L6 730 aa16.99■□□□□ 0.31
VEGFA-223ENST00000523125 ZBTB7AO95365 584 aa16.98■□□□□ 0.31
VEGFA-223ENST00000523125 PTGER2P43116 358 aa16.97■□□□□ 0.31
VEGFA-223ENST00000523125 AMER1Q5JTC6 1135 aaPredicted RBP16.97■□□□□ 0.31
VEGFA-223ENST00000523125 MORC1Q86VD1 984 aa16.97■□□□□ 0.31
VEGFA-223ENST00000523125 AKT1S1Q96B36 256 aa16.97■□□□□ 0.31
VEGFA-223ENST00000523125 KNSTRNQ9Y448 316 aa16.97■□□□□ 0.31
VEGFA-223ENST00000523125 COL24A1Q17RW2 1714 aa16.96■□□□□ 0.31
VEGFA-223ENST00000523125 NKX1-1Q15270 411 aaPredicted RBP16.96■□□□□ 0.31
VEGFA-223ENST00000523125 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.96■□□□□ 0.312e-31■□□□□ 9.6
VEGFA-223ENST00000523125 C5P01031 1676 aa16.96■□□□□ 0.31
VEGFA-223ENST00000523125 IGSF1Q8N6C5 1336 aa16.96■□□□□ 0.3
VEGFA-223ENST00000523125 PER1O15534 1290 aaPredicted RBP16.95■□□□□ 0.3
VEGFA-223ENST00000523125 SPG7Q9UQ90 795 aa16.95■□□□□ 0.3
VEGFA-223ENST00000523125 ATF5Q9Y2D1 282 aaPredicted RBP16.95■□□□□ 0.3
VEGFA-223ENST00000523125 SGIP1Q9BQI5 828 aa16.94■□□□□ 0.3
VEGFA-223ENST00000523125 PPP1R1BQ9UD71 204 aaPredicted RBP16.94■□□□□ 0.3
VEGFA-223ENST00000523125 MPRIPQ6WCQ1 1025 aa16.93■□□□□ 0.3
VEGFA-223ENST00000523125 MTFR1LQ9H019 292 aa16.93■□□□□ 0.3
VEGFA-223ENST00000523125 PLEKHG2Q9H7P9 1386 aa16.92■□□□□ 0.3
VEGFA-223ENST00000523125 CCNL1Q9UK58 526 aaPredicted RBP16.92■□□□□ 0.3
VEGFA-223ENST00000523125 PHKG2P15735 406 aa16.91■□□□□ 0.3
VEGFA-223ENST00000523125 PNPLA7Q6ZV29 1317 aa16.91■□□□□ 0.3
VEGFA-223ENST00000523125 PIGBQ92521 554 aa16.9■□□□□ 0.3
VEGFA-223ENST00000523125 PALLDQ8WX93 1383 aa16.89■□□□□ 0.3
VEGFA-223ENST00000523125 AEBP1Q8IUX7 1158 aa16.89■□□□□ 0.29
VEGFA-223ENST00000523125 IFNL2Q8IZJ0 200 aa16.89■□□□□ 0.29
VEGFA-223ENST00000523125 C4BP0C0L5 1744 aa16.88■□□□□ 0.29
VEGFA-223ENST00000523125 IL13P35225 146 aa16.88■□□□□ 0.29
VEGFA-223ENST00000523125 TFCP2L1Q9NZI6 479 aa16.88■□□□□ 0.29
VEGFA-223ENST00000523125 VIRMAQ69YN4 1812 aaKnown RBP16.88■□□□□ 0.29
VEGFA-223ENST00000523125 UBR3Q6ZT12 1888 aa16.88■□□□□ 0.29
VEGFA-223ENST00000523125 SLC16A10Q8TF71 515 aa16.87■□□□□ 0.29
VEGFA-223ENST00000523125 KDRP35968 1356 aa16.87■□□□□ 0.29
VEGFA-223ENST00000523125 MTHFSP49914 203 aa16.86■□□□□ 0.29
VEGFA-223ENST00000523125 SMARCC1Q92922 1105 aaPredicted RBP16.86■□□□□ 0.29
VEGFA-223ENST00000523125 SCN11AQ9UI33 1791 aa16.85■□□□□ 0.29
VEGFA-223ENST00000523125 CC2D1BQ5T0F9 858 aaKnown RBP16.85■□□□□ 0.29
VEGFA-223ENST00000523125 FHDC1Q9C0D6 1143 aaPredicted RBP16.85■□□□□ 0.29
VEGFA-223ENST00000523125 TMOD3Q9NYL9 352 aa16.85■□□□□ 0.29
VEGFA-223ENST00000523125 NPC1L1Q9UHC9 1359 aa16.85■□□□□ 0.29
VEGFA-223ENST00000523125 PLEKHO1Q53GL0 409 aaPredicted RBP16.84■□□□□ 0.29
VEGFA-223ENST00000523125 SULT6B1Q6IMI4 303 aa16.84■□□□□ 0.29
VEGFA-223ENST00000523125 COL23A1Q86Y22 540 aaPredicted RBP16.84■□□□□ 0.29
VEGFA-223ENST00000523125 ARXQ96QS3 562 aa16.84■□□□□ 0.29
VEGFA-223ENST00000523125 SYT17Q9BSW7 474 aa16.84■□□□□ 0.29
VEGFA-223ENST00000523125 ASAP1Q9ULH1 1129 aa16.84■□□□□ 0.29
VEGFA-223ENST00000523125 KDM6AO15550 1401 aaPredicted RBP16.84■□□□□ 0.29
VEGFA-223ENST00000523125 ZNF831Q5JPB2 1677 aa16.84■□□□□ 0.29
VEGFA-223ENST00000523125 ERVV-2B6SEH9 535 aa16.82■□□□□ 0.28
VEGFA-223ENST00000523125 AMOTQ4VCS5 1084 aa16.82■□□□□ 0.28
VEGFA-223ENST00000523125 ZNF530Q6P9A1 599 aaPredicted RBP16.82■□□□□ 0.28
VEGFA-223ENST00000523125 DCAF5Q96JK2 942 aa16.82■□□□□ 0.28
VEGFA-223ENST00000523125 ATG3Q9NT62 314 aa16.82■□□□□ 0.28
VEGFA-223ENST00000523125 LOC102724428A0A0B4J2F2 783 aa16.81■□□□□ 0.28
VEGFA-223ENST00000523125 SIK1P57059 783 aa16.81■□□□□ 0.28
VEGFA-223ENST00000523125 AMIGO3Q86WK7 504 aa16.81■□□□□ 0.28
VEGFA-223ENST00000523125 COL5A3P25940 1745 aaPredicted RBP16.81■□□□□ 0.28
VEGFA-223ENST00000523125 COL3A1P02461 1466 aaPredicted RBP16.8■□□□□ 0.28
VEGFA-223ENST00000523125 MAP3K5Q99683 1374 aa16.8■□□□□ 0.28
VEGFA-223ENST00000523125 HSP90AB1P08238 724 aaKnown RBP16.8■□□□□ 0.28
VEGFA-223ENST00000523125 ITPK1Q13572 414 aa16.8■□□□□ 0.28
VEGFA-223ENST00000523125 HMGB2P26583 209 aaKnown RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms