RNA–Protein interactions for RNA: ENST00000522883.1

CDK16-218, Transcript of cyclin dependent kinase 16, humanhuman

TSL 4

Gene CDK16, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-218ENST00000522883 MEGF6O75095 1541 aa18.76■□□□□ 0.59
CDK16-218ENST00000522883 EYA1Q99502 592 aa18.76■□□□□ 0.59
CDK16-218ENST00000522883 TNS2Q63HR2 1409 aa18.75■□□□□ 0.59
CDK16-218ENST00000522883 SHANK3Q9BYB0 1731 aa18.74■□□□□ 0.59
CDK16-218ENST00000522883 MARCH10Q8NA82 808 aaPredicted RBP18.74■□□□□ 0.59
CDK16-218ENST00000522883 RGPD1P0DJD0 1748 aa18.74■□□□□ 0.59
CDK16-218ENST00000522883 U2SURPO15042 1029 aaKnown RBP18.73■□□□□ 0.59
CDK16-218ENST00000522883 IL13P35225 146 aa18.73■□□□□ 0.59
CDK16-218ENST00000522883 RAPGEF4Q8WZA2 1011 aa18.73■□□□□ 0.59
CDK16-218ENST00000522883 U2AF1L5P0DN76 240 aaPredicted RBP18.72■□□□□ 0.59
CDK16-218ENST00000522883 TATP17735 454 aaPredicted RBP18.72■□□□□ 0.59
CDK16-218ENST00000522883 U2AF1Q01081 240 aaKnown RBP eCLIP18.72■□□□□ 0.59
CDK16-218ENST00000522883 FAM196AQ6ZSG2 479 aa18.72■□□□□ 0.59
CDK16-218ENST00000522883 ADAMTS8Q9UP79 889 aa18.72■□□□□ 0.59
CDK16-218ENST00000522883 OVOS2A0A0G2JMS6 1433 aa18.72■□□□□ 0.59
CDK16-218ENST00000522883 TNS1Q9HBL0 1735 aaKnown RBP18.71■□□□□ 0.59
CDK16-218ENST00000522883 DDX54Q8TDD1 881 aaKnown RBP18.71■□□□□ 0.59
CDK16-218ENST00000522883 TRIM37O94972 964 aa18.7■□□□□ 0.58
CDK16-218ENST00000522883 NCAPD2Q15021 1401 aa18.7■□□□□ 0.58
CDK16-218ENST00000522883 PNNQ9H307 717 aaKnown RBP18.7■□□□□ 0.58
CDK16-218ENST00000522883 ZCRB1Q8TBF4 217 aaKnown RBP18.69■□□□□ 0.58
CDK16-218ENST00000522883 IGSF1Q8N6C5 1336 aa18.69■□□□□ 0.58
CDK16-218ENST00000522883 PKD1L3Q7Z443 1732 aa18.69■□□□□ 0.58
CDK16-218ENST00000522883 SF3B2Q13435 895 aaKnown RBP18.68■□□□□ 0.58
CDK16-218ENST00000522883 DEFB132Q7Z7B7 95 aa18.67■□□□□ 0.58
CDK16-218ENST00000522883 CCDC125Q86Z20 511 aa18.67■□□□□ 0.58
CDK16-218ENST00000522883 AEBP1Q8IUX7 1158 aa18.67■□□□□ 0.58
CDK16-218ENST00000522883 YTHDC1Q96MU7 727 aaKnown RBP18.67■□□□□ 0.58
CDK16-218ENST00000522883 FCHSD2O94868 740 aa18.66■□□□□ 0.58
CDK16-218ENST00000522883 ACSBG1Q96GR2 724 aa18.66■□□□□ 0.58
CDK16-218ENST00000522883 DOT1LQ8TEK3 1739 aa18.66■□□□□ 0.58
CDK16-218ENST00000522883 SULT6B1Q6IMI4 303 aa18.65■□□□□ 0.58
CDK16-218ENST00000522883 PTF1AQ7RTS3 328 aa18.65■□□□□ 0.58
CDK16-218ENST00000522883 NEFMP07197 916 aa18.64■□□□□ 0.57
CDK16-218ENST00000522883 RUNDC1Q96C34 613 aa18.64■□□□□ 0.57
CDK16-218ENST00000522883 HMOX1P09601 288 aa18.63■□□□□ 0.57
CDK16-218ENST00000522883 HNRNPUQ00839 825 aaKnown RBP eCLIP18.63■□□□□ 0.57
CDK16-218ENST00000522883 NHSQ6T4R5 1651 aa18.63■□□□□ 0.57
CDK16-218ENST00000522883 APBA3O96018 575 aa18.62■□□□□ 0.57
CDK16-218ENST00000522883 CCDC146Q8IYE0 955 aa18.62■□□□□ 0.57
CDK16-218ENST00000522883 RSPH6AQ9H0K4 717 aa18.62■□□□□ 0.57
CDK16-218ENST00000522883 MAPK8IP3Q9UPT6 1336 aa18.62■□□□□ 0.57
CDK16-218ENST00000522883 BTAF1O14981 1849 aa18.61■□□□□ 0.57
CDK16-218ENST00000522883 BCL9O00512 1426 aa18.61■□□□□ 0.57
CDK16-218ENST00000522883 KDRP35968 1356 aa18.61■□□□□ 0.57
CDK16-218ENST00000522883 PCDH11XQ9BZA7 1347 aa18.61■□□□□ 0.57
CDK16-218ENST00000522883 PCDH11YQ9BZA8 1340 aa18.61■□□□□ 0.57
CDK16-218ENST00000522883 CYP27B1O15528 508 aa18.61■□□□□ 0.57
CDK16-218ENST00000522883 KCNQ2O43526 872 aa18.61■□□□□ 0.57
CDK16-218ENST00000522883 BAG6P46379 1132 aa18.61■□□□□ 0.57
CDK16-218ENST00000522883 EN1Q05925 392 aaPredicted RBP18.61■□□□□ 0.57
CDK16-218ENST00000522883 SPG7Q9UQ90 795 aa18.61■□□□□ 0.57
CDK16-218ENST00000522883 ITGB4P16144 1822 aa18.6■□□□□ 0.57
CDK16-218ENST00000522883 PRKAR2BP31323 418 aa18.59■□□□□ 0.57
CDK16-218ENST00000522883 PLEKHF1Q96S99 279 aa18.59■□□□□ 0.57
CDK16-218ENST00000522883 TOGARAM1Q9Y4F4 1720 aa18.59■□□□□ 0.57
CDK16-218ENST00000522883 NGEFQ8N5V2 710 aa18.58■□□□□ 0.56
CDK16-218ENST00000522883 BCL11BQ9C0K0 894 aaPredicted RBP18.58■□□□□ 0.56
CDK16-218ENST00000522883 VIRMAQ69YN4 1812 aaKnown RBP18.58■□□□□ 0.56
CDK16-218ENST00000522883 EZH2Q15910 746 aaKnown RBP18.57■□□□□ 0.56
CDK16-218ENST00000522883 PLEKHO1Q53GL0 409 aaPredicted RBP18.57■□□□□ 0.56
CDK16-218ENST00000522883 SYTL4Q96C24 671 aaPredicted RBP18.57■□□□□ 0.56
CDK16-218ENST00000522883 DLG5Q8TDM6 1919 aa18.57■□□□□ 0.56
CDK16-218ENST00000522883 APAF1O14727 1248 aa18.56■□□□□ 0.56
CDK16-218ENST00000522883 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.56■□□□□ 0.56
CDK16-218ENST00000522883 ZBED9Q6R2W3 1325 aa18.55■□□□□ 0.56
CDK16-218ENST00000522883 PRIM1P49642 420 aaKnown RBP18.55■□□□□ 0.56
CDK16-218ENST00000522883 ZNF530Q6P9A1 599 aaPredicted RBP18.55■□□□□ 0.56
CDK16-218ENST00000522883 PHKG2P15735 406 aa18.54■□□□□ 0.56
CDK16-218ENST00000522883 IFNL2Q8IZJ0 200 aa18.54■□□□□ 0.56
CDK16-218ENST00000522883 CAMKK2Q96RR4 588 aa18.54■□□□□ 0.56
CDK16-218ENST00000522883 RREB1Q92766 1687 aa18.54■□□□□ 0.56
CDK16-218ENST00000522883 RGPD3A6NKT7 1758 aaPredicted RBP18.53■□□□□ 0.56
CDK16-218ENST00000522883 RGPD4Q7Z3J3 1758 aa18.53■□□□□ 0.56
CDK16-218ENST00000522883 AMOTQ4VCS5 1084 aa18.53■□□□□ 0.56
CDK16-218ENST00000522883 NCBP3Q53F19 620 aaKnown RBP18.53■□□□□ 0.56
CDK16-218ENST00000522883 NUP188Q5SRE5 1749 aa18.52■□□□□ 0.56
CDK16-218ENST00000522883 PLEKHG2Q9H7P9 1386 aa18.52■□□□□ 0.55
CDK16-218ENST00000522883 TMPOP42166 694 aaKnown RBP18.51■□□□□ 0.55
CDK16-218ENST00000522883 NKX1-1Q15270 411 aaPredicted RBP18.51■□□□□ 0.55
CDK16-218ENST00000522883 NFE2L2Q16236 605 aa18.51■□□□□ 0.55
CDK16-218ENST00000522883 C1orf141Q5JVX7 400 aa18.51■□□□□ 0.55
CDK16-218ENST00000522883 PHACTR3Q96KR7 559 aa18.51■□□□□ 0.55
CDK16-218ENST00000522883 SCN11AQ9UI33 1791 aa18.5■□□□□ 0.55
CDK16-218ENST00000522883 MPRIPQ6WCQ1 1025 aa18.5■□□□□ 0.55
CDK16-218ENST00000522883 GAS2L2Q8NHY3 880 aa18.5■□□□□ 0.55
CDK16-218ENST00000522883 SALL2Q9Y467 1007 aaPredicted RBP18.5■□□□□ 0.55
CDK16-218ENST00000522883 SENP3-EIF4A1A0A087X0R7 540 aa18.49■□□□□ 0.55
CDK16-218ENST00000522883 PLSCR1O15162 318 aa18.49■□□□□ 0.55
CDK16-218ENST00000522883 NEUROD2Q15784 382 aa18.49■□□□□ 0.55
CDK16-218ENST00000522883 MTHFSDQ2M296 383 aaKnown RBP18.49■□□□□ 0.55
CDK16-218ENST00000522883 RRP7AQ9Y3A4 280 aaKnown RBP18.49■□□□□ 0.55
CDK16-218ENST00000522883 RIPK4P57078 832 aa18.48■□□□□ 0.55
CDK16-218ENST00000522883 CCDC27Q2M243 656 aa18.48■□□□□ 0.55
CDK16-218ENST00000522883 LMOD3Q0VAK6 560 aa18.47■□□□□ 0.55
CDK16-218ENST00000522883 KDM6AO15550 1401 aaPredicted RBP18.47■□□□□ 0.55
CDK16-218ENST00000522883 LY75O60449 1722 aa18.46■□□□□ 0.55
CDK16-218ENST00000522883 HSP90AB1P08238 724 aaKnown RBP18.46■□□□□ 0.55
CDK16-218ENST00000522883 PROM2Q8N271 834 aa18.46■□□□□ 0.55
CDK16-218ENST00000522883 TXNRD1Q16881 649 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms