RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 NPC1L1Q9UHC9 1359 aa22.33■■□□□ 1.17
PABPC1-221ENST00000522720 NCAPD2Q15021 1401 aa22.32■■□□□ 1.16
PABPC1-221ENST00000522720 PLSCR1O15162 318 aa22.32■■□□□ 1.16
PABPC1-221ENST00000522720 CC2D1BQ5T0F9 858 aaKnown RBP22.31■■□□□ 1.16
PABPC1-221ENST00000522720 KCNQ2O43526 872 aa22.3■■□□□ 1.16
PABPC1-221ENST00000522720 SHANK3Q9BYB0 1731 aa22.29■■□□□ 1.16
PABPC1-221ENST00000522720 ACSBG1Q96GR2 724 aa22.29■■□□□ 1.16
PABPC1-221ENST00000522720 NHSQ6T4R5 1651 aa22.27■■□□□ 1.16
PABPC1-221ENST00000522720 RGPD3A6NKT7 1758 aaPredicted RBP22.26■■□□□ 1.15
PABPC1-221ENST00000522720 RGPD4Q7Z3J3 1758 aa22.26■■□□□ 1.15
PABPC1-221ENST00000522720 RREB1Q92766 1687 aa22.26■■□□□ 1.15
PABPC1-221ENST00000522720 MTHFSP49914 203 aa22.25■■□□□ 1.15
PABPC1-221ENST00000522720 IGSF1Q8N6C5 1336 aa22.25■■□□□ 1.15
PABPC1-221ENST00000522720 PCDH11XQ9BZA7 1347 aa22.24■■□□□ 1.15
PABPC1-221ENST00000522720 PCDH11YQ9BZA8 1340 aa22.24■■□□□ 1.15
PABPC1-221ENST00000522720 CNGB1Q14028 1251 aaPredicted RBP22.23■■□□□ 1.15
PABPC1-221ENST00000522720 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.23■■□□□ 1.15
PABPC1-221ENST00000522720 CYP27B1O15528 508 aa22.22■■□□□ 1.15
PABPC1-221ENST00000522720 IL13P35225 146 aa22.22■■□□□ 1.15
PABPC1-221ENST00000522720 PROM2Q8N271 834 aa22.22■■□□□ 1.15
PABPC1-221ENST00000522720 SPG7Q9UQ90 795 aa22.22■■□□□ 1.15
PABPC1-221ENST00000522720 NUP188Q5SRE5 1749 aa22.22■■□□□ 1.15
PABPC1-221ENST00000522720 PKD1L3Q7Z443 1732 aa22.22■■□□□ 1.15
PABPC1-221ENST00000522720 PRIM1P49642 420 aaKnown RBP22.21■■□□□ 1.15
PABPC1-221ENST00000522720 BTAF1O14981 1849 aa22.21■■□□□ 1.15
PABPC1-221ENST00000522720 PSDA5PKW4 1024 aaPredicted RBP22.2■■□□□ 1.14
PABPC1-221ENST00000522720 R3HDM1Q15032 1099 aaKnown RBP22.19■■□□□ 1.14
PABPC1-221ENST00000522720 TXNRD1Q16881 649 aa22.19■■□□□ 1.14
PABPC1-221ENST00000522720 NBPF14Q5TI25 921 aa22.19■■□□□ 1.14
PABPC1-221ENST00000522720 PLEKHG2Q9H7P9 1386 aa22.19■■□□□ 1.14
PABPC1-221ENST00000522720 DOT1LQ8TEK3 1739 aa22.19■■□□□ 1.14
PABPC1-221ENST00000522720 ZEB1P37275 1124 aaPredicted RBP22.18■■□□□ 1.14
PABPC1-221ENST00000522720 SYTL4Q96C24 671 aaPredicted RBP22.18■■□□□ 1.14
PABPC1-221ENST00000522720 NKX1-1Q15270 411 aaPredicted RBP22.17■■□□□ 1.14
PABPC1-221ENST00000522720 SULT6B1Q6IMI4 303 aa22.16■■□□□ 1.14
PABPC1-221ENST00000522720 AEBP1Q8IUX7 1158 aa22.15■■□□□ 1.14
PABPC1-221ENST00000522720 SRCAPQ6ZRS2 3230 aa22.14■■□□□ 1.14
PABPC1-221ENST00000522720 KDRP35968 1356 aa22.14■■□□□ 1.14
PABPC1-221ENST00000522720 DIAPH1O60610 1272 aaKnown RBP22.14■■□□□ 1.13
PABPC1-221ENST00000522720 IFNL2Q8IZJ0 200 aa22.14■■□□□ 1.13
PABPC1-221ENST00000522720 PLEKHO1Q53GL0 409 aaPredicted RBP22.13■■□□□ 1.13
PABPC1-221ENST00000522720 PHKG2P15735 406 aa22.12■■□□□ 1.13
PABPC1-221ENST00000522720 AMOTQ4VCS5 1084 aa22.12■■□□□ 1.13
PABPC1-221ENST00000522720 PPP2R1AP30153 589 aa22.1■■□□□ 1.13
PABPC1-221ENST00000522720 ANO8Q9HCE9 1232 aaPredicted RBP22.1■■□□□ 1.13
PABPC1-221ENST00000522720 COL3A1P02461 1466 aaPredicted RBP22.09■■□□□ 1.13
PABPC1-221ENST00000522720 ITGB4P16144 1822 aa22.09■■□□□ 1.13
PABPC1-221ENST00000522720 SLC27A3Q5K4L6 730 aa22.09■■□□□ 1.13
PABPC1-221ENST00000522720 MPRIPQ6WCQ1 1025 aa22.09■■□□□ 1.13
PABPC1-221ENST00000522720 TOGARAM1Q9Y4F4 1720 aa22.09■■□□□ 1.13
PABPC1-221ENST00000522720 LRRC4BQ9NT99 713 aa22.08■■□□□ 1.13
PABPC1-221ENST00000522720 HMOX1P09601 288 aa22.07■■□□□ 1.12
PABPC1-221ENST00000522720 DDX10Q13206 875 aaKnown RBP22.07■■□□□ 1.12
PABPC1-221ENST00000522720 ZNF530Q6P9A1 599 aaPredicted RBP22.07■■□□□ 1.12
PABPC1-221ENST00000522720 CFAP53Q96M91 514 aa22.07■■□□□ 1.12
PABPC1-221ENST00000522720 LY75O60449 1722 aa22.06■■□□□ 1.12
PABPC1-221ENST00000522720 HSP90AB1P08238 724 aaKnown RBP22.06■■□□□ 1.12
PABPC1-221ENST00000522720 PIGBQ92521 554 aa22.06■■□□□ 1.12
PABPC1-221ENST00000522720 STK32BQ9NY57 414 aa22.06■■□□□ 1.12
PABPC1-221ENST00000522720 SLC15A2Q16348 729 aa22.05■■□□□ 1.12
PABPC1-221ENST00000522720 DCAF5Q96JK2 942 aa22.04■■□□□ 1.12
PABPC1-221ENST00000522720 PAPPAQ13219 1627 aa22.03■■□□□ 1.12
PABPC1-221ENST00000522720 U2SURPO15042 1029 aaKnown RBP22.03■■□□□ 1.12
PABPC1-221ENST00000522720 C1orf141Q5JVX7 400 aa22.03■■□□□ 1.12
PABPC1-221ENST00000522720 TMOD3Q9NYL9 352 aa22.03■■□□□ 1.12
PABPC1-221ENST00000522720 ERVV-2B6SEH9 535 aa22.02■■□□□ 1.12
PABPC1-221ENST00000522720 SMARCC1Q92922 1105 aaPredicted RBP22.02■■□□□ 1.12
PABPC1-221ENST00000522720 CCNL1Q9UK58 526 aaPredicted RBP22.02■■□□□ 1.12
PABPC1-221ENST00000522720 LRP5O75197 1615 aa22.02■■□□□ 1.11
PABPC1-221ENST00000522720 KCNQ4P56696 695 aa22.01■■□□□ 1.11
PABPC1-221ENST00000522720 PALLDQ8WX93 1383 aa22■■□□□ 1.11
PABPC1-221ENST00000522720 KDM6AO15550 1401 aaPredicted RBP21.99■■□□□ 1.11
PABPC1-221ENST00000522720 AKAP4Q5JQC9 854 aa21.99■■□□□ 1.11
PABPC1-221ENST00000522720 AKT1S1Q96B36 256 aa21.99■■□□□ 1.11
PABPC1-221ENST00000522720 NUDCQ9Y266 331 aa21.99■■□□□ 1.11
PABPC1-221ENST00000522720 ZNF827Q17R98 1081 aa21.98■■□□□ 1.11
PABPC1-221ENST00000522720 PDGFDQ9GZP0 370 aaPredicted RBP21.98■■□□□ 1.11
PABPC1-221ENST00000522720 HMGB2P26583 209 aaKnown RBP21.97■■□□□ 1.11
PABPC1-221ENST00000522720 MTHFSDQ2M296 383 aaKnown RBP21.97■■□□□ 1.11
PABPC1-221ENST00000522720 ASAP1Q9ULH1 1129 aa21.97■■□□□ 1.11
PABPC1-221ENST00000522720 CASZ1Q86V15 1759 aa21.97■■□□□ 1.11
PABPC1-221ENST00000522720 RALBP1Q15311 655 aa21.96■■□□□ 1.11
PABPC1-221ENST00000522720 CABP4P57796 275 aa21.95■■□□□ 1.1
PABPC1-221ENST00000522720 SPON1Q9HCB6 807 aa21.95■■□□□ 1.1
PABPC1-221ENST00000522720 ATG3Q9NT62 314 aa21.95■■□□□ 1.1
PABPC1-221ENST00000522720 U2AF1L5P0DN76 240 aaPredicted RBP21.94■■□□□ 1.1
PABPC1-221ENST00000522720 U2AF1Q01081 240 aaKnown RBP eCLIP21.94■■□□□ 1.1
PABPC1-221ENST00000522720 SCN11AQ9UI33 1791 aa21.94■■□□□ 1.1
PABPC1-221ENST00000522720 LOC102724428A0A0B4J2F2 783 aa21.93■■□□□ 1.1
PABPC1-221ENST00000522720 SIK1P57059 783 aa21.93■■□□□ 1.1
PABPC1-221ENST00000522720 RSPH6AQ9H0K4 717 aa21.93■■□□□ 1.1
PABPC1-221ENST00000522720 TAF1LQ8IZX4 1826 aa21.92■■□□□ 1.1
PABPC1-221ENST00000522720 NFATC2IPQ8NCF5 419 aa21.92■■□□□ 1.1
PABPC1-221ENST00000522720 LGR6Q9HBX8 967 aa21.92■■□□□ 1.1
PABPC1-221ENST00000522720 TFCP2L1Q9NZI6 479 aa21.92■■□□□ 1.1
PABPC1-221ENST00000522720 QSER1Q2KHR3 1735 aa21.92■■□□□ 1.1
PABPC1-221ENST00000522720 C5P01031 1676 aa21.91■■□□□ 1.1
PABPC1-221ENST00000522720 FCHSD2O94868 740 aa21.91■■□□□ 1.1
PABPC1-221ENST00000522720 PRKAR2BP31323 418 aa21.91■■□□□ 1.1
PABPC1-221ENST00000522720 RNMTO43148 476 aaKnown RBP21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms