RNA–Protein interactions for RNA: ENST00000522476.5

NDRG1-222, Transcript of N-myc downstream regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NDRG1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-222ENST00000522476 GAS2L2Q8NHY3 880 aa16.88■□□□□ 0.29
NDRG1-222ENST00000522476 ARHGAP45Q92619 1136 aa16.88■□□□□ 0.29
NDRG1-222ENST00000522476 DDX19BQ9UMR2 479 aa16.88■□□□□ 0.29
NDRG1-222ENST00000522476 HSP90AB2PQ58FF8 381 aa16.87■□□□□ 0.29
NDRG1-222ENST00000522476 ATF7IPQ6VMQ6 1270 aa16.87■□□□□ 0.29
NDRG1-222ENST00000522476 DDX17Q92841 729 aaKnown RBP16.87■□□□□ 0.29
NDRG1-222ENST00000522476 COG6Q9Y2V7 657 aa16.87■□□□□ 0.29
NDRG1-222ENST00000522476 RGPD8O14715 1765 aaPredicted RBP16.86■□□□□ 0.29
NDRG1-222ENST00000522476 IGSF1Q8N6C5 1336 aa16.86■□□□□ 0.29
NDRG1-222ENST00000522476 PSME1Q06323 249 aa16.86■□□□□ 0.29
NDRG1-222ENST00000522476 PANK1Q8TE04 598 aa16.86■□□□□ 0.29
NDRG1-222ENST00000522476 SSH1Q8WYL5 1049 aa16.86■□□□□ 0.29
NDRG1-222ENST00000522476 RWDD1Q9H446 243 aaPredicted RBP16.86■□□□□ 0.29
NDRG1-222ENST00000522476 PEAK1Q9H792 1746 aa16.85■□□□□ 0.29
NDRG1-222ENST00000522476 C1QTNF8P60827 252 aa16.85■□□□□ 0.29
NDRG1-222ENST00000522476 DCCP43146 1447 aa16.84■□□□□ 0.29
NDRG1-222ENST00000522476 KIF1AQ12756 1690 aa16.84■□□□□ 0.29
NDRG1-222ENST00000522476 PAK3O75914 559 aaPredicted RBP16.84■□□□□ 0.29
NDRG1-222ENST00000522476 R3HDM1Q15032 1099 aaKnown RBP16.84■□□□□ 0.29
NDRG1-222ENST00000522476 ESCO1Q5FWF5 840 aa16.84■□□□□ 0.29
NDRG1-222ENST00000522476 ZNF784Q8NCA9 323 aaPredicted RBP16.84■□□□□ 0.29
NDRG1-222ENST00000522476 GJD4Q96KN9 370 aaPredicted RBP16.84■□□□□ 0.29
NDRG1-222ENST00000522476 HOXC9P31274 260 aa16.83■□□□□ 0.28
NDRG1-222ENST00000522476 ANP32AP39687 249 aaKnown RBP16.83■□□□□ 0.28
NDRG1-222ENST00000522476 RTF1Q92541 710 aaKnown RBP16.83■□□□□ 0.28
NDRG1-222ENST00000522476 LAS1LQ9Y4W2 734 aaKnown RBP16.83■□□□□ 0.28
NDRG1-222ENST00000522476 KIAA0232Q92628 1395 aa16.83■□□□□ 0.28
NDRG1-222ENST00000522476 VAMP4O75379 141 aa16.81■□□□□ 0.28
NDRG1-222ENST00000522476 BCL2L13Q9BXK5 485 aa16.81■□□□□ 0.28
NDRG1-222ENST00000522476 MBIPQ9NS73 344 aa16.81■□□□□ 0.28
NDRG1-222ENST00000522476 BABAM1Q9NWV8 329 aa16.81■□□□□ 0.28
NDRG1-222ENST00000522476 DCAF8L1A6NGE4 600 aa16.8■□□□□ 0.28
NDRG1-222ENST00000522476 PDE4AP27815 886 aa16.8■□□□□ 0.28
NDRG1-222ENST00000522476 TWISTNBQ3B726 338 aaPredicted RBP16.8■□□□□ 0.28
NDRG1-222ENST00000522476 IP6K1Q92551 441 aa16.8■□□□□ 0.28
NDRG1-222ENST00000522476 BACH2Q9BYV9 841 aa16.8■□□□□ 0.28
NDRG1-222ENST00000522476 API5Q9BZZ5 524 aaKnown RBP16.8■□□□□ 0.28
NDRG1-222ENST00000522476 NOB1Q9ULX3 412 aaKnown RBP16.8■□□□□ 0.28
NDRG1-222ENST00000522476 SOS1Q07889 1333 aaPredicted RBP16.8■□□□□ 0.28
NDRG1-222ENST00000522476 MST1RQ04912 1400 aa16.8■□□□□ 0.28
NDRG1-222ENST00000522476 CHL1O00533 1208 aa16.79■□□□□ 0.28
NDRG1-222ENST00000522476 TRIM27P14373 513 aa16.79■□□□□ 0.28
NDRG1-222ENST00000522476 BAG6P46379 1132 aa16.79■□□□□ 0.28
NDRG1-222ENST00000522476 AEBP1Q8IUX7 1158 aa16.79■□□□□ 0.28
NDRG1-222ENST00000522476 EYA1Q99502 592 aa16.79■□□□□ 0.28
NDRG1-222ENST00000522476 SOX12O15370 315 aa16.78■□□□□ 0.28
NDRG1-222ENST00000522476 CHMP4AQ9BY43 222 aa16.78■□□□□ 0.28
NDRG1-222ENST00000522476 PHRF1Q9P1Y6 1649 aaKnown RBP16.78■□□□□ 0.28
NDRG1-222ENST00000522476 CEP350Q5VT06 3117 aa16.78■□□□□ 0.28
NDRG1-222ENST00000522476 RLBP1P12271 317 aa16.77■□□□□ 0.28
NDRG1-222ENST00000522476 MRPL50Q8N5N7 158 aaKnown RBP16.77■□□□□ 0.28
NDRG1-222ENST00000522476 C1orf167Q5SNV9 1468 aa16.77■□□□□ 0.27
NDRG1-222ENST00000522476 DLG5Q8TDM6 1919 aa16.77■□□□□ 0.27
NDRG1-222ENST00000522476 ITPRIPQ8IWB1 547 aa16.77■□□□□ 0.27
NDRG1-222ENST00000522476 MARF1Q9Y4F3 1742 aaKnown RBP16.76■□□□□ 0.27
NDRG1-222ENST00000522476 NFAT5O94916 1531 aa16.76■□□□□ 0.27
NDRG1-222ENST00000522476 HDAC1Q13547 482 aaPredicted RBP16.76■□□□□ 0.27
NDRG1-222ENST00000522476 FAM161AQ3B820 660 aa16.76■□□□□ 0.27
NDRG1-222ENST00000522476 SLIT3O75094 1523 aa16.75■□□□□ 0.27
NDRG1-222ENST00000522476 THUMPD2Q9BTF0 503 aaKnown RBP16.75■□□□□ 0.27
NDRG1-222ENST00000522476 USP19O94966 1318 aa16.74■□□□□ 0.27
NDRG1-222ENST00000522476 GNAT3A8MTJ3 354 aa16.74■□□□□ 0.27
NDRG1-222ENST00000522476 MTHFSDQ2M296 383 aaKnown RBP16.74■□□□□ 0.27
NDRG1-222ENST00000522476 CRB1P82279 1406 aa16.73■□□□□ 0.27
NDRG1-222ENST00000522476 FAM83GA6ND36 823 aa16.73■□□□□ 0.27
NDRG1-222ENST00000522476 IGHDP01880 384 aa16.73■□□□□ 0.27
NDRG1-222ENST00000522476 ERICH6Q7L0X2 663 aa16.73■□□□□ 0.27
NDRG1-222ENST00000522476 KRT28Q7Z3Y7 464 aa16.73■□□□□ 0.27
NDRG1-222ENST00000522476 UTRNP46939 3433 aa16.73■□□□□ 0.27
NDRG1-222ENST00000522476 PTPRCP08575 1304 aa16.72■□□□□ 0.27
NDRG1-222ENST00000522476 EN1Q05925 392 aaPredicted RBP16.72■□□□□ 0.27
NDRG1-222ENST00000522476 NUTM2GQ5VZR2 741 aa16.72■□□□□ 0.27
NDRG1-222ENST00000522476 TMEM57Q8N5G2 664 aa16.72■□□□□ 0.27
NDRG1-222ENST00000522476 MAP3K5Q99683 1374 aa16.72■□□□□ 0.27
NDRG1-222ENST00000522476 PLEKHG2Q9H7P9 1386 aa16.72■□□□□ 0.27
NDRG1-222ENST00000522476 ABCC4O15439 1325 aa16.71■□□□□ 0.27
NDRG1-222ENST00000522476 SEPT12Q8IYM1 358 aa16.71■□□□□ 0.27
NDRG1-222ENST00000522476 C8orf58Q8NAV2 365 aa16.71■□□□□ 0.27
NDRG1-222ENST00000522476 ZBTB40Q9NUA8 1239 aa16.71■□□□□ 0.27
NDRG1-222ENST00000522476 PCDHB15Q9Y5E8 787 aa16.71■□□□□ 0.27
NDRG1-222ENST00000522476 FOXO3O43524 673 aa16.7■□□□□ 0.26
NDRG1-222ENST00000522476 GCP02774 474 aa16.7■□□□□ 0.26
NDRG1-222ENST00000522476 DCTN1Q14203 1278 aa16.7■□□□□ 0.26
NDRG1-222ENST00000522476 AMOTQ4VCS5 1084 aa16.7■□□□□ 0.26
NDRG1-222ENST00000522476 MCM10Q7L590 875 aa16.7■□□□□ 0.26
NDRG1-222ENST00000522476 DDRGK1Q96HY6 314 aa16.7■□□□□ 0.26
NDRG1-222ENST00000522476 ORAI2Q96SN7 254 aa16.7■□□□□ 0.26
NDRG1-222ENST00000522476 NPHP3Q7Z494 1330 aa16.69■□□□□ 0.26
NDRG1-222ENST00000522476 ARHGEF25Q86VW2 580 aa16.69■□□□□ 0.26
NDRG1-222ENST00000522476 TSPYL6Q8N831 410 aa16.69■□□□□ 0.26
NDRG1-222ENST00000522476 IPO9Q96P70 1041 aaKnown RBP16.69■□□□□ 0.26
NDRG1-222ENST00000522476 TSPYL4Q9UJ04 414 aa16.69■□□□□ 0.26
NDRG1-222ENST00000522476 TNNQ9UQP3 1299 aa16.69■□□□□ 0.26
NDRG1-222ENST00000522476 LTN1O94822 1766 aa16.69■□□□□ 0.26
NDRG1-222ENST00000522476 TRPM3Q9HCF6 1732 aaPredicted RBP16.68■□□□□ 0.26
NDRG1-222ENST00000522476 RGS3P49796 1198 aa16.67■□□□□ 0.26
NDRG1-222ENST00000522476 MYT1Q01538 1121 aa16.67■□□□□ 0.26
NDRG1-222ENST00000522476 PLEKHO1Q53GL0 409 aaPredicted RBP16.67■□□□□ 0.26
NDRG1-222ENST00000522476 KRT27Q7Z3Y8 459 aa16.67■□□□□ 0.26
NDRG1-222ENST00000522476 GLI3P10071 1580 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms