RNA–Protein interactions for RNA: ENST00000522111.2

TRNP1-201, Transcript of TMF1-regulated nuclear protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRNP1, Length 1,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1-201ENST00000522111 BCAR3O75815 825 aa35.29■■■■□ 3.24
TRNP1-201ENST00000522111 MAP3K5Q99683 1374 aa35.28■■■■□ 3.24
TRNP1-201ENST00000522111 COL5A2P05997 1499 aaPredicted RBP35.28■■■■□ 3.24
TRNP1-201ENST00000522111 CFAP44Q96MT7 982 aa35.27■■■■□ 3.24
TRNP1-201ENST00000522111 MBIPQ9NS73 344 aa35.27■■■■□ 3.24
TRNP1-201ENST00000522111 ZNF853P0CG23 659 aa35.26■■■■□ 3.24
TRNP1-201ENST00000522111 CERKQ8TCT0 537 aa35.25■■■■□ 3.23
TRNP1-201ENST00000522111 STRN4Q9NRL3 753 aa35.25■■■■□ 3.23
TRNP1-201ENST00000522111 PLEKHO1Q53GL0 409 aaPredicted RBP35.24■■■■□ 3.23
TRNP1-201ENST00000522111 RAPGEF4Q8WZA2 1011 aa35.24■■■■□ 3.23
TRNP1-201ENST00000522111 ZNF530Q6P9A1 599 aaPredicted RBP35.24■■■■□ 3.23
TRNP1-201ENST00000522111 WDR17Q8IZU2 1322 aa35.23■■■■□ 3.23
TRNP1-201ENST00000522111 TOM1L2Q6ZVM7 507 aa35.23■■■■□ 3.23
TRNP1-201ENST00000522111 BCL2L13Q9BXK5 485 aa35.23■■■■□ 3.23
TRNP1-201ENST00000522111 CRB1P82279 1406 aa35.22■■■■□ 3.23
TRNP1-201ENST00000522111 RARSP54136 660 aaKnown RBP35.22■■■■□ 3.23
TRNP1-201ENST00000522111 MEGF6O75095 1541 aa35.21■■■■□ 3.23
TRNP1-201ENST00000522111 AMOTQ4VCS5 1084 aa35.21■■■■□ 3.23
TRNP1-201ENST00000522111 HTATSF1O43719 755 aaKnown RBP35.2■■■■□ 3.23
TRNP1-201ENST00000522111 LRRC37A3O60309 1634 aa35.19■■■■□ 3.22
TRNP1-201ENST00000522111 EVA1CP58658 441 aa35.19■■■■□ 3.22
TRNP1-201ENST00000522111 IL17REQ8NFR9 667 aa35.19■■■■□ 3.22
TRNP1-201ENST00000522111 BTG4Q9NY30 223 aa35.18■■■■□ 3.22
TRNP1-201ENST00000522111 MIS18AQ9NYP9 233 aa35.18■■■■□ 3.22
TRNP1-201ENST00000522111 TATP17735 454 aaPredicted RBP35.17■■■■□ 3.22
TRNP1-201ENST00000522111 LARP1Q6PKG0 1096 aaKnown RBP35.17■■■■□ 3.22
TRNP1-201ENST00000522111 ADAMTS2O95450 1211 aa35.16■■■■□ 3.22
TRNP1-201ENST00000522111 C20orf194Q5TEA3 1177 aa35.16■■■■□ 3.22
TRNP1-201ENST00000522111 COL14A1Q05707 1796 aaKnown RBP35.16■■■■□ 3.22
TRNP1-201ENST00000522111 CT47B1P0C2W7 299 aaPredicted RBP35.16■■■■□ 3.22
TRNP1-201ENST00000522111 NUTM2BA6NNL0 878 aaPredicted RBP35.15■■■■□ 3.22
TRNP1-201ENST00000522111 NUTM2EB1AL46 878 aaPredicted RBP35.15■■■■□ 3.22
TRNP1-201ENST00000522111 ELL2O00472 640 aaPredicted RBP35.15■■■■□ 3.22
TRNP1-201ENST00000522111 CHL1O00533 1208 aa35.15■■■■□ 3.22
TRNP1-201ENST00000522111 AKAP4Q5JQC9 854 aa35.15■■■■□ 3.22
TRNP1-201ENST00000522111 C1orf141Q5JVX7 400 aa35.15■■■■□ 3.22
TRNP1-201ENST00000522111 NUTM2AQ8IVF1 878 aaPredicted RBP35.15■■■■□ 3.22
TRNP1-201ENST00000522111 GOLGA6L2Q8N9W4 650 aaPredicted RBP35.15■■■■□ 3.22
TRNP1-201ENST00000522111 TSPYL6Q8N831 410 aa35.14■■■■□ 3.22
TRNP1-201ENST00000522111 MPRIPQ6WCQ1 1025 aa35.13■■■■□ 3.21
TRNP1-201ENST00000522111 ERICH6BQ5W0A0 696 aa35.13■■■■□ 3.21
TRNP1-201ENST00000522111 FRAT1Q92837 279 aaPredicted RBP35.13■■■■□ 3.21
TRNP1-201ENST00000522111 LGR6Q9HBX8 967 aa35.12■■■■□ 3.21
TRNP1-201ENST00000522111 CANXP27824 592 aaKnown RBP35.11■■■■□ 3.21
TRNP1-201ENST00000522111 TSPYL4Q9UJ04 414 aa35.11■■■■□ 3.21
TRNP1-201ENST00000522111 C8orf58Q8NAV2 365 aa35.11■■■■□ 3.21
TRNP1-201ENST00000522111 USP35Q9P2H5 1018 aa35.11■■■■□ 3.21
TRNP1-201ENST00000522111 SMC4Q9NTJ3 1288 aa35.1■■■■□ 3.21
TRNP1-201ENST00000522111 VIRMAQ69YN4 1812 aaKnown RBP35.09■■■■□ 3.21
TRNP1-201ENST00000522111 KRT24Q2M2I5 525 aa35.09■■■■□ 3.21
TRNP1-201ENST00000522111 EXOC6Q8TAG9 804 aa35.09■■■■□ 3.21
TRNP1-201ENST00000522111 SSH1Q8WYL5 1049 aa35.09■■■■□ 3.21
TRNP1-201ENST00000522111 TWISTNBQ3B726 338 aaPredicted RBP35.08■■■■□ 3.21
TRNP1-201ENST00000522111 CARD10Q9BWT7 1032 aa35.08■■■■□ 3.21
TRNP1-201ENST00000522111 CEMIPQ8WUJ3 1361 aa35.08■■■■□ 3.21
TRNP1-201ENST00000522111 SPG7Q9UQ90 795 aa35.07■■■■□ 3.21
TRNP1-201ENST00000522111 PARP4Q9UKK3 1724 aaKnown RBP35.06■■■■□ 3.2
TRNP1-201ENST00000522111 VAMP4O75379 141 aa35.05■■■■□ 3.2
TRNP1-201ENST00000522111 CRBNQ96SW2 442 aa35.05■■■■□ 3.2
TRNP1-201ENST00000522111 PKD1L3Q7Z443 1732 aa35.05■■■■□ 3.2
TRNP1-201ENST00000522111 PLCH1Q4KWH8 1693 aa35.05■■■■□ 3.2
TRNP1-201ENST00000522111 PPP4R2Q9NY27 417 aa35.05■■■■□ 3.2
TRNP1-201ENST00000522111 OVOS2A0A0G2JMS6 1433 aa35.04■■■■□ 3.2
TRNP1-201ENST00000522111 TAF7Q15545 349 aaPredicted RBP35.04■■■■□ 3.2
TRNP1-201ENST00000522111 RNMTO43148 476 aaKnown RBP35.02■■■■□ 3.2
TRNP1-201ENST00000522111 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP35.02■■■■□ 3.2
TRNP1-201ENST00000522111 TCERG1O14776 1098 aaKnown RBP35.01■■■■□ 3.19
TRNP1-201ENST00000522111 PHKG2P15735 406 aa35.01■■■■□ 3.19
TRNP1-201ENST00000522111 TEFQ10587 303 aa35.01■■■■□ 3.19
TRNP1-201ENST00000522111 IL2RBP14784 551 aa35■■■■□ 3.19
TRNP1-201ENST00000522111 JCADQ9P266 1359 aa34.99■■■■□ 3.19
TRNP1-201ENST00000522111 B4GALNT3Q6L9W6 998 aa34.98■■■■□ 3.19
TRNP1-201ENST00000522111 CYP27B1O15528 508 aa34.98■■■■□ 3.19
TRNP1-201ENST00000522111 IFNL2Q8IZJ0 200 aa34.98■■■■□ 3.19
TRNP1-201ENST00000522111 TNNQ9UQP3 1299 aa34.98■■■■□ 3.19
TRNP1-201ENST00000522111 PLEKHG2Q9H7P9 1386 aa34.97■■■■□ 3.19
TRNP1-201ENST00000522111 ALDH1L2Q3SY69 923 aa34.97■■■■□ 3.19
TRNP1-201ENST00000522111 ZNF428Q96B54 188 aa34.96■■■■□ 3.19
TRNP1-201ENST00000522111 PANK1Q8TE04 598 aa34.96■■■■□ 3.19
TRNP1-201ENST00000522111 KDM6AO15550 1401 aaPredicted RBP34.95■■■■□ 3.19
TRNP1-201ENST00000522111 ZCRB1Q8TBF4 217 aaKnown RBP34.94■■■■□ 3.18
TRNP1-201ENST00000522111 ADAMTS7Q9UKP4 1686 aa34.94■■■■□ 3.18
TRNP1-201ENST00000522111 CLUAP1Q96AJ1 413 aa34.94■■■■□ 3.18
TRNP1-201ENST00000522111 SCN11AQ9UI33 1791 aa34.94■■■■□ 3.18
TRNP1-201ENST00000522111 NOB1Q9ULX3 412 aaKnown RBP34.93■■■■□ 3.18
TRNP1-201ENST00000522111 NRAPQ86VF7 1730 aa34.92■■■■□ 3.18
TRNP1-201ENST00000522111 BTBD11A6QL63 1104 aa34.92■■■■□ 3.18
TRNP1-201ENST00000522111 ZKSCAN2Q63HK3 967 aa34.92■■■■□ 3.18
TRNP1-201ENST00000522111 KDM3BQ7LBC6 1761 aa34.91■■■■□ 3.18
TRNP1-201ENST00000522111 BABAM1Q9NWV8 329 aa34.91■■■■□ 3.18
TRNP1-201ENST00000522111 HSPA1LP34931 641 aa34.91■■■■□ 3.18
TRNP1-201ENST00000522111 PDE3AQ14432 1141 aa34.91■■■■□ 3.18
TRNP1-201ENST00000522111 KIF16BQ96L93 1317 aa34.91■■■■□ 3.18
TRNP1-201ENST00000522111 PCDH11XQ9BZA7 1347 aa34.91■■■■□ 3.18
TRNP1-201ENST00000522111 PCDH11YQ9BZA8 1340 aa34.91■■■■□ 3.18
TRNP1-201ENST00000522111 SIPA1L3O60292 1781 aaPredicted RBP34.89■■■■□ 3.18
TRNP1-201ENST00000522111 RLBP1P12271 317 aa34.89■■■■□ 3.18
TRNP1-201ENST00000522111 SHANK3Q9BYB0 1731 aa34.89■■■■□ 3.18
TRNP1-201ENST00000522111 MRPL50Q8N5N7 158 aaKnown RBP34.89■■■■□ 3.18
TRNP1-201ENST00000522111 DDX54Q8TDD1 881 aaKnown RBP34.88■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms