RNA–Protein interactions for RNA: ENST00000521590.5

SDC2-206, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-206ENST00000521590 BARGINQ6ZT62 677 aa8.01□□□□□ -1.13
SDC2-206ENST00000521590 RNF25Q96BH1 459 aaPredicted RBP8.01□□□□□ -1.13
SDC2-206ENST00000521590 MS4A4AQ96JQ5 239 aa8.01□□□□□ -1.13
SDC2-206ENST00000521590 ANKRD30AQ9BXX3 1397 aa8□□□□□ -1.13
SDC2-206ENST00000521590 VARS2Q5ST30 1063 aaKnown RBP8□□□□□ -1.13
SDC2-206ENST00000521590 LMOD2Q6P5Q4 547 aa8□□□□□ -1.13
SDC2-206ENST00000521590 STK32BQ9NY57 414 aa8□□□□□ -1.13
SDC2-206ENST00000521590 NRXN1Q9ULB1 1477 aa8□□□□□ -1.13
SDC2-206ENST00000521590 PAPPAQ13219 1627 aa8□□□□□ -1.13
SDC2-206ENST00000521590 QSER1Q2KHR3 1735 aa7.99□□□□□ -1.13
SDC2-206ENST00000521590 CHIC2Q9UKJ5 165 aa7.99□□□□□ -1.13
SDC2-206ENST00000521590 KIAA1210Q9ULL0 1709 aa7.99□□□□□ -1.13
SDC2-206ENST00000521590 TOPAZ1Q8N9V7 1692 aa7.98□□□□□ -1.13
SDC2-206ENST00000521590 TOMM70O94826 608 aa7.98□□□□□ -1.13
SDC2-206ENST00000521590 TXNRD1Q16881 649 aa7.98□□□□□ -1.13
SDC2-206ENST00000521590 ZNF326Q5BKZ1 582 aaKnown RBP7.98□□□□□ -1.13
SDC2-206ENST00000521590 USP35Q9P2H5 1018 aa7.98□□□□□ -1.13
SDC2-206ENST00000521590 PHF8Q9UPP1 1060 aa7.98□□□□□ -1.13
SDC2-206ENST00000521590 KIF1BO60333 1816 aa7.97□□□□□ -1.13
SDC2-206ENST00000521590 FAM161AQ3B820 660 aa7.97□□□□□ -1.13
SDC2-206ENST00000521590 GPR153Q6NV75 609 aa7.97□□□□□ -1.13
SDC2-206ENST00000521590 WAPLQ7Z5K2 1190 aa7.97□□□□□ -1.13
SDC2-206ENST00000521590 AKAP12Q02952 1782 aa7.97□□□□□ -1.13
SDC2-206ENST00000521590 TUBGCP6Q96RT7 1819 aa7.96□□□□□ -1.13
SDC2-206ENST00000521590 OVOS2A0A0G2JMS6 1433 aa7.96□□□□□ -1.13
SDC2-206ENST00000521590 OVOS2A0A0J9YW53 1432 aa7.96□□□□□ -1.13
SDC2-206ENST00000521590 OVOS2Q6IE36 1432 aa7.96□□□□□ -1.13
SDC2-206ENST00000521590 ATP7BP35670 1465 aa7.96□□□□□ -1.13
SDC2-206ENST00000521590 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.96□□□□□ -1.14
SDC2-206ENST00000521590 C11orf95C9JLR9 678 aaPredicted RBP7.96□□□□□ -1.14
SDC2-206ENST00000521590 ZFP91Q96JP5 570 aaPredicted RBP7.96□□□□□ -1.14
SDC2-206ENST00000521590 STRN4Q9NRL3 753 aa7.96□□□□□ -1.14
SDC2-206ENST00000521590 LRRC37A3O60309 1634 aa7.96□□□□□ -1.14
SDC2-206ENST00000521590 CLTCL1P53675 1640 aa7.96□□□□□ -1.14
SDC2-206ENST00000521590 PHRF1Q9P1Y6 1649 aaKnown RBP7.96□□□□□ -1.14
SDC2-206ENST00000521590 ANKRD50Q9ULJ7 1429 aa7.95□□□□□ -1.14
SDC2-206ENST00000521590 RIMBP2O15034 1052 aa7.95□□□□□ -1.14
SDC2-206ENST00000521590 HSPA1AP0DMV8 641 aaKnown RBP7.95□□□□□ -1.14
SDC2-206ENST00000521590 HSPA1BP0DMV9 641 aaKnown RBP7.95□□□□□ -1.14
SDC2-206ENST00000521590 RNF166Q96A37 237 aaPredicted RBP7.95□□□□□ -1.14
SDC2-206ENST00000521590 PRDM11Q9NQV5 511 aa7.95□□□□□ -1.14
SDC2-206ENST00000521590 DHX57Q6P158 1386 aaKnown RBP7.95□□□□□ -1.14
SDC2-206ENST00000521590 PLEKHH1Q9ULM0 1364 aa7.95□□□□□ -1.14
SDC2-206ENST00000521590 KNDC1Q76NI1 1749 aa7.95□□□□□ -1.14
SDC2-206ENST00000521590 SSH2Q76I76 1423 aa7.95□□□□□ -1.14
SDC2-206ENST00000521590 RIOK3O14730 519 aaKnown RBP7.94□□□□□ -1.14
SDC2-206ENST00000521590 SOX12O15370 315 aa7.94□□□□□ -1.14
SDC2-206ENST00000521590 CHRNA2Q15822 529 aa7.94□□□□□ -1.14
SDC2-206ENST00000521590 ZSWIM6Q9HCJ5 1215 aa7.94□□□□□ -1.14
SDC2-206ENST00000521590 LMO7Q8WWI1 1683 aa7.94□□□□□ -1.14
SDC2-206ENST00000521590 KIAA0232Q92628 1395 aa7.94□□□□□ -1.14
SDC2-206ENST00000521590 PPLO60437 1756 aa7.94□□□□□ -1.14
SDC2-206ENST00000521590 KANK4Q5T7N3 995 aaPredicted RBP7.93□□□□□ -1.14
SDC2-206ENST00000521590 LARP1Q6PKG0 1096 aaKnown RBP7.93□□□□□ -1.14
SDC2-206ENST00000521590 ZNF687Q8N1G0 1237 aa7.93□□□□□ -1.14
SDC2-206ENST00000521590 TCP11L2Q8N4U5 519 aa7.93□□□□□ -1.14
SDC2-206ENST00000521590 WNK3Q9BYP7 1800 aa7.93□□□□□ -1.14
SDC2-206ENST00000521590 TULP4Q9NRJ4 1543 aa7.93□□□□□ -1.14
SDC2-206ENST00000521590 BCL9O00512 1426 aa7.92□□□□□ -1.14
SDC2-206ENST00000521590 VGFO15240 615 aaPredicted RBP7.91□□□□□ -1.14
SDC2-206ENST00000521590 ZNF827Q17R98 1081 aa7.91□□□□□ -1.14
SDC2-206ENST00000521590 ARSIQ5FYB1 569 aa7.91□□□□□ -1.14
SDC2-206ENST00000521590 SLC16A10Q8TF71 515 aa7.91□□□□□ -1.14
SDC2-206ENST00000521590 KHSRPQ92945 711 aaKnown RBP eCLIP7.91□□□□□ -1.14
SDC2-206ENST00000521590 THRAP3Q9Y2W1 955 aaKnown RBP7.91□□□□□ -1.14
SDC2-206ENST00000521590 POLD1P28340 1107 aa7.9□□□□□ -1.14
SDC2-206ENST00000521590 PMFBP1Q8TBY8 1022 aa7.9□□□□□ -1.14
SDC2-206ENST00000521590 RGS19P49795 217 aa7.89□□□□□ -1.15
SDC2-206ENST00000521590 EVA1CP58658 441 aa7.89□□□□□ -1.15
SDC2-206ENST00000521590 MARCH10Q8NA82 808 aaPredicted RBP7.89□□□□□ -1.15
SDC2-206ENST00000521590 RBM46Q8TBY0 533 aaKnown RBP7.89□□□□□ -1.15
SDC2-206ENST00000521590 NHSQ6T4R5 1651 aa7.89□□□□□ -1.15
SDC2-206ENST00000521590 ABCC11Q96J66 1382 aa7.88□□□□□ -1.15
SDC2-206ENST00000521590 BTAF1O14981 1849 aa7.88□□□□□ -1.15
SDC2-206ENST00000521590 ZC3H6P61129 1189 aaKnown RBP7.88□□□□□ -1.15
SDC2-206ENST00000521590 FBXO22Q8NEZ5 403 aa7.88□□□□□ -1.15
SDC2-206ENST00000521590 NMRK2Q9NPI5 230 aa7.88□□□□□ -1.15
SDC2-206ENST00000521590 STK26Q9P289 416 aa7.88□□□□□ -1.15
SDC2-206ENST00000521590 MLLT1Q03111 559 aaPredicted RBP7.87□□□□□ -1.15
SDC2-206ENST00000521590 FSTL1Q12841 308 aa7.87□□□□□ -1.15
SDC2-206ENST00000521590 LRRC4BQ9NT99 713 aa7.87□□□□□ -1.15
SDC2-206ENST00000521590 CICQ96RK0 1608 aaPredicted RBP7.87□□□□□ -1.15
SDC2-206ENST00000521590 PNPLA7Q6ZV29 1317 aa7.86□□□□□ -1.15
SDC2-206ENST00000521590 ACIN1Q9UKV3 1341 aaKnown RBP7.86□□□□□ -1.15
SDC2-206ENST00000521590 DDB1Q16531 1140 aa7.86□□□□□ -1.15
SDC2-206ENST00000521590 COL5A2P05997 1499 aaPredicted RBP7.85□□□□□ -1.15
SDC2-206ENST00000521590 NUP155O75694 1391 aa7.84□□□□□ -1.15
SDC2-206ENST00000521590 ZNF316A6NFI3 1004 aaPredicted RBP7.84□□□□□ -1.15
SDC2-206ENST00000521590 TMEM132EQ6IEE7 984 aa7.84□□□□□ -1.15
SDC2-206ENST00000521590 CD2APQ9Y5K6 639 aa7.84□□□□□ -1.15
SDC2-206ENST00000521590 CRB1P82279 1406 aa7.84□□□□□ -1.15
SDC2-206ENST00000521590 ANKARQ7Z5J8 1434 aa7.84□□□□□ -1.15
SDC2-206ENST00000521590 VPS8Q8N3P4 1428 aa7.84□□□□□ -1.15
SDC2-206ENST00000521590 GPRASP1Q5JY77 1395 aa7.84□□□□□ -1.16
SDC2-206ENST00000521590 NLRP6P59044 892 aa7.83□□□□□ -1.16
SDC2-206ENST00000521590 ANKRD13DQ6ZTN6 518 aa7.83□□□□□ -1.16
SDC2-206ENST00000521590 SIRT1Q96EB6 747 aa7.83□□□□□ -1.16
SDC2-206ENST00000521590 ABHD8Q96I13 439 aa7.83□□□□□ -1.16
SDC2-206ENST00000521590 PRDM10Q9NQV6 1147 aa7.83□□□□□ -1.16
SDC2-206ENST00000521590 KAT6BQ8WYB5 2073 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms