RNA–Protein interactions for RNA: ENST00000521434.5

MRPS28-207, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5 BASIC

Gene MRPS28, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-207ENST00000521434 NLRP2Q9NX02 1062 aa12.82□□□□□ -0.36
MRPS28-207ENST00000521434 PNPLA7Q6ZV29 1317 aa12.82□□□□□ -0.36
MRPS28-207ENST00000521434 MON2Q7Z3U7 1717 aa12.82□□□□□ -0.36
MRPS28-207ENST00000521434 USP54Q70EL1 1684 aa12.81□□□□□ -0.36
MRPS28-207ENST00000521434 GRIN3BO60391 1043 aa12.81□□□□□ -0.36
MRPS28-207ENST00000521434 LY75O60449 1722 aa12.8□□□□□ -0.36
MRPS28-207ENST00000521434 POTEHQ6S545 545 aa12.8□□□□□ -0.36
MRPS28-207ENST00000521434 TFCP2L1Q9NZI6 479 aa12.8□□□□□ -0.36
MRPS28-207ENST00000521434 KTN1Q86UP2 1357 aaKnown RBP12.8□□□□□ -0.36
MRPS28-207ENST00000521434 YBX3P16989 372 aaKnown RBP eCLIP12.79□□□□□ -0.36
MRPS28-207ENST00000521434 USP31Q70CQ4 1352 aa12.78□□□□□ -0.36
MRPS28-207ENST00000521434 ATP10DQ9P241 1426 aa12.78□□□□□ -0.36
MRPS28-207ENST00000521434 DOT1LQ8TEK3 1739 aa12.77□□□□□ -0.36
MRPS28-207ENST00000521434 ANKRD24Q8TF21 1146 aa12.77□□□□□ -0.37
MRPS28-207ENST00000521434 FAM208AQ9UK61 1670 aaKnown RBP12.77□□□□□ -0.37
MRPS28-207ENST00000521434 KCNQ4P56696 695 aa12.76□□□□□ -0.37
MRPS28-207ENST00000521434 HSPA6P17066 643 aa12.75□□□□□ -0.37
MRPS28-207ENST00000521434 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.75□□□□□ -0.377e-7■■□□□ 13.8
MRPS28-207ENST00000521434 DDX54Q8TDD1 881 aaKnown RBP12.75□□□□□ -0.37
MRPS28-207ENST00000521434 GPBP1L1Q9HC44 474 aaPredicted RBP12.75□□□□□ -0.37
MRPS28-207ENST00000521434 ANKRD36BQ8N2N9 1353 aa12.74□□□□□ -0.37
MRPS28-207ENST00000521434 ABCB7O75027 752 aa12.74□□□□□ -0.37
MRPS28-207ENST00000521434 NME9Q86XW9 330 aa12.74□□□□□ -0.37
MRPS28-207ENST00000521434 SYTL4Q96C24 671 aaPredicted RBP12.74□□□□□ -0.37
MRPS28-207ENST00000521434 PRIM1P49642 420 aaKnown RBP12.73□□□□□ -0.37
MRPS28-207ENST00000521434 ADCY9O60503 1353 aa12.72□□□□□ -0.37
MRPS28-207ENST00000521434 SBNO2Q9Y2G9 1366 aa12.72□□□□□ -0.37
MRPS28-207ENST00000521434 POLA2Q14181 598 aa12.72□□□□□ -0.37
MRPS28-207ENST00000521434 COL23A1Q86Y22 540 aaPredicted RBP12.72□□□□□ -0.37
MRPS28-207ENST00000521434 CCNL1Q9UK58 526 aaPredicted RBP12.72□□□□□ -0.37
MRPS28-207ENST00000521434 NSD2O96028 1365 aa12.71□□□□□ -0.37
MRPS28-207ENST00000521434 CD2APQ9Y5K6 639 aa12.71□□□□□ -0.37
MRPS28-207ENST00000521434 RGPD2P0DJD1 1756 aa12.71□□□□□ -0.38
MRPS28-207ENST00000521434 CD163L1Q9NR16 1453 aa12.71□□□□□ -0.38
MRPS28-207ENST00000521434 C5P01031 1676 aa12.7□□□□□ -0.38
MRPS28-207ENST00000521434 ROCK2O75116 1388 aaKnown RBP12.7□□□□□ -0.38
MRPS28-207ENST00000521434 TAF1LQ8IZX4 1826 aa12.7□□□□□ -0.38
MRPS28-207ENST00000521434 MSL1Q68DK7 614 aa12.7□□□□□ -0.38
MRPS28-207ENST00000521434 ZNF526Q8TF50 670 aaPredicted RBP12.7□□□□□ -0.38
MRPS28-207ENST00000521434 IP6K1Q92551 441 aa12.7□□□□□ -0.38
MRPS28-207ENST00000521434 L3MBTL2Q969R5 705 aa12.69□□□□□ -0.38
MRPS28-207ENST00000521434 LTV1Q96GA3 475 aaPredicted RBP12.69□□□□□ -0.38
MRPS28-207ENST00000521434 EDC4Q6P2E9 1401 aaKnown RBP12.69□□□□□ -0.38
MRPS28-207ENST00000521434 USP47Q96K76 1375 aa12.69□□□□□ -0.38
MRPS28-207ENST00000521434 HDGFL2Q7Z4V5 671 aaPredicted RBP12.68□□□□□ -0.38
MRPS28-207ENST00000521434 ZCRB1Q8TBF4 217 aaKnown RBP12.68□□□□□ -0.38
MRPS28-207ENST00000521434 HMGB2P26583 209 aaKnown RBP12.67□□□□□ -0.38
MRPS28-207ENST00000521434 FLAD1Q8NFF5 587 aa12.67□□□□□ -0.38
MRPS28-207ENST00000521434 TMC1Q8TDI8 760 aa12.66□□□□□ -0.38
MRPS28-207ENST00000521434 SLC12A5Q9H2X9 1139 aa12.65□□□□□ -0.38
MRPS28-207ENST00000521434 MEGF6O75095 1541 aa12.65□□□□□ -0.38
MRPS28-207ENST00000521434 UBR3Q6ZT12 1888 aa12.64□□□□□ -0.39
MRPS28-207ENST00000521434 KIF3CO14782 793 aa12.64□□□□□ -0.39
MRPS28-207ENST00000521434 TERF2IPQ9NYB0 399 aa12.64□□□□□ -0.39
MRPS28-207ENST00000521434 IGSF1Q8N6C5 1336 aa12.63□□□□□ -0.39
MRPS28-207ENST00000521434 C4BP0C0L5 1744 aa12.63□□□□□ -0.39
MRPS28-207ENST00000521434 HOXC9P31274 260 aa12.63□□□□□ -0.39
MRPS28-207ENST00000521434 APLP1P51693 650 aa12.63□□□□□ -0.39
MRPS28-207ENST00000521434 A0A1W2PP64 1363 aa12.63□□□□□ -0.39
MRPS28-207ENST00000521434 MAP3K19Q56UN5 1328 aa12.62□□□□□ -0.39
MRPS28-207ENST00000521434 TOGARAM1Q9Y4F4 1720 aa12.62□□□□□ -0.39
MRPS28-207ENST00000521434 ITGB4P16144 1822 aa12.62□□□□□ -0.39
MRPS28-207ENST00000521434 AMPHP49418 695 aa12.62□□□□□ -0.39
MRPS28-207ENST00000521434 CGNL1Q0VF96 1302 aa12.62□□□□□ -0.39
MRPS28-207ENST00000521434 PALLDQ8WX93 1383 aa12.61□□□□□ -0.39
MRPS28-207ENST00000521434 CICQ96RK0 1608 aaPredicted RBP12.61□□□□□ -0.39
MRPS28-207ENST00000521434 PCNTO95613 3336 aa12.6□□□□□ -0.39
MRPS28-207ENST00000521434 DNAJC5GQ8N7S2 189 aa12.6□□□□□ -0.39
MRPS28-207ENST00000521434 COG3Q96JB2 828 aa12.6□□□□□ -0.39
MRPS28-207ENST00000521434 AK7Q96M32 723 aa12.6□□□□□ -0.39
MRPS28-207ENST00000521434 WWC3Q9ULE0 1092 aa12.6□□□□□ -0.39
MRPS28-207ENST00000521434 NBPF6Q5VWK0 638 aa12.59□□□□□ -0.39
MRPS28-207ENST00000521434 RAPGEF4Q8WZA2 1011 aa12.59□□□□□ -0.39
MRPS28-207ENST00000521434 NBPF4Q96M43 638 aa12.59□□□□□ -0.39
MRPS28-207ENST00000521434 PUS7Q96PZ0 661 aaKnown RBP12.59□□□□□ -0.39
MRPS28-207ENST00000521434 NSD3Q9BZ95 1437 aa12.59□□□□□ -0.39
MRPS28-207ENST00000521434 RTL1A6NKG5 1358 aa12.58□□□□□ -0.4
MRPS28-207ENST00000521434 KIF13BQ9NQT8 1826 aa12.58□□□□□ -0.4
MRPS28-207ENST00000521434 TOMM70O94826 608 aa12.58□□□□□ -0.4
MRPS28-207ENST00000521434 FBLN1P23142 703 aa12.58□□□□□ -0.4
MRPS28-207ENST00000521434 MPRIPQ6WCQ1 1025 aa12.58□□□□□ -0.4
MRPS28-207ENST00000521434 AMIGO3Q86WK7 504 aa12.58□□□□□ -0.4
MRPS28-207ENST00000521434 WDR90Q96KV7 1748 aa12.58□□□□□ -0.4
MRPS28-207ENST00000521434 SIN3AQ96ST3 1273 aa12.58□□□□□ -0.4
MRPS28-207ENST00000521434 PCDH11XQ9BZA7 1347 aa12.58□□□□□ -0.4
MRPS28-207ENST00000521434 PCDH11YQ9BZA8 1340 aa12.58□□□□□ -0.4
MRPS28-207ENST00000521434 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.57□□□□□ -0.4
MRPS28-207ENST00000521434 PHF14O94880 888 aa12.57□□□□□ -0.4
MRPS28-207ENST00000521434 TATP17735 454 aaPredicted RBP12.57□□□□□ -0.4
MRPS28-207ENST00000521434 USHBP1Q8N6Y0 703 aa12.57□□□□□ -0.4
MRPS28-207ENST00000521434 SMARCC1Q92922 1105 aaPredicted RBP12.57□□□□□ -0.4
MRPS28-207ENST00000521434 CARD11Q9BXL7 1154 aa12.57□□□□□ -0.4
MRPS28-207ENST00000521434 MAP2P11137 1827 aaKnown RBP12.57□□□□□ -0.4
MRPS28-207ENST00000521434 N4BP2Q86UW6 1770 aaPredicted RBP12.56□□□□□ -0.4
MRPS28-207ENST00000521434 SMG6Q86US8 1419 aaKnown RBP12.56□□□□□ -0.4
MRPS28-207ENST00000521434 NEUROD1Q13562 356 aa12.56□□□□□ -0.4
MRPS28-207ENST00000521434 KIAA1551Q9HCM1 1747 aa12.55□□□□□ -0.4
MRPS28-207ENST00000521434 SSFA2P28290 1259 aa12.55□□□□□ -0.4
MRPS28-207ENST00000521434 PKD1L3Q7Z443 1732 aa12.54□□□□□ -0.4
MRPS28-207ENST00000521434 RRS1Q15050 365 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms