RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 INSRP06213 1382 aa27.33■■□□□ 1.97
PABPC1-215ENST00000520804 KIF24Q5T7B8 1368 aa27.33■■□□□ 1.97
PABPC1-215ENST00000520804 NSD3Q9BZ95 1437 aa27.33■■□□□ 1.96
PABPC1-215ENST00000520804 HSP90AB2PQ58FF8 381 aa27.32■■□□□ 1.96
PABPC1-215ENST00000520804 DOT1LQ8TEK3 1739 aa27.32■■□□□ 1.96
PABPC1-215ENST00000520804 FLT4P35916 1363 aa27.32■■□□□ 1.96
PABPC1-215ENST00000520804 PRIM1P49642 420 aaKnown RBP27.31■■□□□ 1.96
PABPC1-215ENST00000520804 USHBP1Q8N6Y0 703 aa27.31■■□□□ 1.96
PABPC1-215ENST00000520804 MTFR1LQ9H019 292 aa27.31■■□□□ 1.96
PABPC1-215ENST00000520804 CGNL1Q0VF96 1302 aa27.31■■□□□ 1.96
PABPC1-215ENST00000520804 ZNF827Q17R98 1081 aa27.29■■□□□ 1.96
PABPC1-215ENST00000520804 SLC27A3Q5K4L6 730 aa27.29■■□□□ 1.96
PABPC1-215ENST00000520804 SYTL4Q96C24 671 aaPredicted RBP27.29■■□□□ 1.96
PABPC1-215ENST00000520804 NSD2O96028 1365 aa27.28■■□□□ 1.96
PABPC1-215ENST00000520804 RAPGEF4Q8WZA2 1011 aa27.28■■□□□ 1.96
PABPC1-215ENST00000520804 DCAF8L1A6NGE4 600 aa27.25■■□□□ 1.95
PABPC1-215ENST00000520804 TATP17735 454 aaPredicted RBP27.25■■□□□ 1.95
PABPC1-215ENST00000520804 AKT1S1Q96B36 256 aa27.25■■□□□ 1.95
PABPC1-215ENST00000520804 SGIP1Q9BQI5 828 aa27.25■■□□□ 1.95
PABPC1-215ENST00000520804 EMILIN1Q9Y6C2 1016 aa27.24■■□□□ 1.95
PABPC1-215ENST00000520804 LY75O60449 1722 aa27.24■■□□□ 1.95
PABPC1-215ENST00000520804 QSER1Q2KHR3 1735 aa27.21■■□□□ 1.95
PABPC1-215ENST00000520804 ANKRD26Q9UPS8 1709 aa27.21■■□□□ 1.95
PABPC1-215ENST00000520804 PCDH11XQ9BZA7 1347 aa27.19■■□□□ 1.94
PABPC1-215ENST00000520804 PCDH11YQ9BZA8 1340 aa27.19■■□□□ 1.94
PABPC1-215ENST00000520804 YY1P25490 414 aa27.19■■□□□ 1.94
PABPC1-215ENST00000520804 KCNQ4P56696 695 aa27.19■■□□□ 1.94
PABPC1-215ENST00000520804 FHDC1Q9C0D6 1143 aaPredicted RBP27.19■■□□□ 1.94
PABPC1-215ENST00000520804 SYT17Q9BSW7 474 aa27.18■■□□□ 1.94
PABPC1-215ENST00000520804 POLR3GLQ9BT43 218 aa27.18■■□□□ 1.94
PABPC1-215ENST00000520804 NCAPD2Q15021 1401 aa27.17■■□□□ 1.94
PABPC1-215ENST00000520804 PPM1GO15355 546 aaPredicted RBP27.17■■□□□ 1.94
PABPC1-215ENST00000520804 ARXQ96QS3 562 aa27.17■■□□□ 1.94
PABPC1-215ENST00000520804 WASHC2AQ641Q2 1341 aa27.16■■□□□ 1.94
PABPC1-215ENST00000520804 EIF4G2P78344 907 aaKnown RBP eCLIP27.16■■□□□ 1.94
PABPC1-215ENST00000520804 SLC16A10Q8TF71 515 aa27.16■■□□□ 1.94
PABPC1-215ENST00000520804 CCNL1Q9UK58 526 aaPredicted RBP27.16■■□□□ 1.94
PABPC1-215ENST00000520804 MAP2P11137 1827 aaKnown RBP27.16■■□□□ 1.94
PABPC1-215ENST00000520804 PNPLA7Q6ZV29 1317 aa27.16■■□□□ 1.94
PABPC1-215ENST00000520804 TFCP2L1Q9NZI6 479 aa27.15■■□□□ 1.94
PABPC1-215ENST00000520804 TUBGCP6Q96RT7 1819 aa27.15■■□□□ 1.94
PABPC1-215ENST00000520804 PKD1L3Q7Z443 1732 aa27.14■■□□□ 1.94
PABPC1-215ENST00000520804 CYP27B1O15528 508 aa27.14■■□□□ 1.94
PABPC1-215ENST00000520804 HSPA5P11021 654 aaKnown RBP27.13■■□□□ 1.93
PABPC1-215ENST00000520804 POLKQ9UBT6 870 aa27.13■■□□□ 1.93
PABPC1-215ENST00000520804 CCER1Q8TC90 406 aaPredicted RBP27.12■■□□□ 1.93
PABPC1-215ENST00000520804 COL24A1Q17RW2 1714 aa27.11■■□□□ 1.93
PABPC1-215ENST00000520804 MAP3K5Q99683 1374 aa27.1■■□□□ 1.93
PABPC1-215ENST00000520804 TOGARAM1Q9Y4F4 1720 aa27.1■■□□□ 1.93
PABPC1-215ENST00000520804 EYA1Q99502 592 aa27.09■■□□□ 1.93
PABPC1-215ENST00000520804 MPRIPQ6WCQ1 1025 aa27.08■■□□□ 1.93
PABPC1-215ENST00000520804 SPG7Q9UQ90 795 aa27.07■■□□□ 1.92
PABPC1-215ENST00000520804 PALLDQ8WX93 1383 aa27.07■■□□□ 1.92
PABPC1-215ENST00000520804 ITGB4P16144 1822 aa27.06■■□□□ 1.92
PABPC1-215ENST00000520804 C5P01031 1676 aa27.06■■□□□ 1.92
PABPC1-215ENST00000520804 POLD1P28340 1107 aa27.06■■□□□ 1.92
PABPC1-215ENST00000520804 TNNT2P45379 298 aaPredicted RBP27.06■■□□□ 1.92
PABPC1-215ENST00000520804 NKX1-1Q15270 411 aaPredicted RBP27.06■■□□□ 1.92
PABPC1-215ENST00000520804 PANK3Q9H999 370 aa27.06■■□□□ 1.92
PABPC1-215ENST00000520804 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.05■■□□□ 1.92
PABPC1-215ENST00000520804 HMGB2P26583 209 aaKnown RBP27.03■■□□□ 1.92
PABPC1-215ENST00000520804 EIF4A2Q14240 407 aaKnown RBP27.03■■□□□ 1.92
PABPC1-215ENST00000520804 COL23A1Q86Y22 540 aaPredicted RBP27.02■■□□□ 1.92
PABPC1-215ENST00000520804 SMARCC1Q92922 1105 aaPredicted RBP27.02■■□□□ 1.92
PABPC1-215ENST00000520804 TAF1LQ8IZX4 1826 aa27.02■■□□□ 1.92
PABPC1-215ENST00000520804 PIGBQ92521 554 aa27.01■■□□□ 1.91
PABPC1-215ENST00000520804 MSH5O43196 834 aa26.99■■□□□ 1.91
PABPC1-215ENST00000520804 IFNL2Q8IZJ0 200 aa26.98■■□□□ 1.91
PABPC1-215ENST00000520804 KLHL34Q8N239 644 aa26.98■■□□□ 1.91
PABPC1-215ENST00000520804 UTRNP46939 3433 aa26.97■■□□□ 1.91
PABPC1-215ENST00000520804 PHKG2P15735 406 aa26.97■■□□□ 1.91
PABPC1-215ENST00000520804 PLEKHG2Q9H7P9 1386 aa26.97■■□□□ 1.91
PABPC1-215ENST00000520804 C4BP0C0L5 1744 aa26.96■■□□□ 1.91
PABPC1-215ENST00000520804 IGSF1Q8N6C5 1336 aa26.95■■□□□ 1.91
PABPC1-215ENST00000520804 FLAD1Q8NFF5 587 aa26.95■■□□□ 1.9
PABPC1-215ENST00000520804 TMOD3Q9NYL9 352 aa26.94■■□□□ 1.9
PABPC1-215ENST00000520804 GPR162Q16538 588 aa26.92■■□□□ 1.9
PABPC1-215ENST00000520804 MORC1Q86VD1 984 aa26.92■■□□□ 1.9
PABPC1-215ENST00000520804 CHD4Q14839 1912 aa26.92■■□□□ 1.9
PABPC1-215ENST00000520804 LOC102724428A0A0B4J2F2 783 aa26.91■■□□□ 1.9
PABPC1-215ENST00000520804 SIK1P57059 783 aa26.91■■□□□ 1.9
PABPC1-215ENST00000520804 MSL1Q68DK7 614 aa26.91■■□□□ 1.9
PABPC1-215ENST00000520804 AK7Q96M32 723 aa26.91■■□□□ 1.9
PABPC1-215ENST00000520804 NLGN2Q8NFZ4 835 aa26.9■■□□□ 1.9
PABPC1-215ENST00000520804 ASAP1Q9ULH1 1129 aa26.9■■□□□ 1.9
PABPC1-215ENST00000520804 KNSTRNQ9Y448 316 aa26.89■■□□□ 1.9
PABPC1-215ENST00000520804 UBR3Q6ZT12 1888 aa26.88■■□□□ 1.89
PABPC1-215ENST00000520804 AMIGO3Q86WK7 504 aa26.88■■□□□ 1.89
PABPC1-215ENST00000520804 ZNF784Q8NCA9 323 aaPredicted RBP26.87■■□□□ 1.89
PABPC1-215ENST00000520804 LINC00116Q8NCU8 138 aa26.87■■□□□ 1.89
PABPC1-215ENST00000520804 PLEKHO1Q53GL0 409 aaPredicted RBP26.86■■□□□ 1.89
PABPC1-215ENST00000520804 ATG3Q9NT62 314 aa26.86■■□□□ 1.89
PABPC1-215ENST00000520804 HSP90AB1P08238 724 aaKnown RBP26.85■■□□□ 1.89
PABPC1-215ENST00000520804 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.84■■□□□ 1.89
PABPC1-215ENST00000520804 ERVV-2B6SEH9 535 aa26.84■■□□□ 1.89
PABPC1-215ENST00000520804 PHF14O94880 888 aa26.84■■□□□ 1.89
PABPC1-215ENST00000520804 ITPK1Q13572 414 aa26.84■■□□□ 1.89
PABPC1-215ENST00000520804 PELP1Q8IZL8 1130 aaKnown RBP26.84■■□□□ 1.89
PABPC1-215ENST00000520804 KIF7Q2M1P5 1343 aa26.84■■□□□ 1.89
PABPC1-215ENST00000520804 SSFA2P28290 1259 aa26.83■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms