RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 MIS18AQ9NYP9 233 aa32.43■■■□□ 2.78
COL13A1-213ENST00000520267 HAP1P54257 671 aaPredicted RBP32.43■■■□□ 2.78
COL13A1-213ENST00000520267 RTF1Q92541 710 aaKnown RBP32.43■■■□□ 2.78
COL13A1-213ENST00000520267 LNPKQ9C0E8 428 aa32.43■■■□□ 2.78
COL13A1-213ENST00000520267 SIRT2Q8IXJ6 389 aa32.42■■■□□ 2.78
COL13A1-213ENST00000520267 UPF2Q9HAU5 1272 aaKnown RBP32.42■■■□□ 2.78
COL13A1-213ENST00000520267 KIF24Q5T7B8 1368 aa32.42■■■□□ 2.78
COL13A1-213ENST00000520267 CHD1LQ86WJ1 897 aa32.42■■■□□ 2.78
COL13A1-213ENST00000520267 TBC1D32Q96NH3 1257 aa32.42■■■□□ 2.78
COL13A1-213ENST00000520267 GAS2L2Q8NHY3 880 aa32.4■■■□□ 2.78
COL13A1-213ENST00000520267 RGS12O14924 1447 aa32.4■■■□□ 2.78
COL13A1-213ENST00000520267 NWD1Q149M9 1564 aa32.4■■■□□ 2.78
COL13A1-213ENST00000520267 C14orf37Q86TY3 774 aa32.39■■■□□ 2.78
COL13A1-213ENST00000520267 DEKP35659 375 aaKnown RBP32.39■■■□□ 2.78
COL13A1-213ENST00000520267 GCC1Q96CN9 775 aa32.39■■■□□ 2.78
COL13A1-213ENST00000520267 SETD1BQ9UPS6 1966 aaKnown RBP32.38■■■□□ 2.77
COL13A1-213ENST00000520267 INTS3Q68E01 1043 aaKnown RBP32.37■■■□□ 2.77
COL13A1-213ENST00000520267 TSPYL4Q9UJ04 414 aa32.37■■■□□ 2.77
COL13A1-213ENST00000520267 ANKRD45Q5TZF3 282 aa32.36■■■□□ 2.77
COL13A1-213ENST00000520267 LTV1Q96GA3 475 aaPredicted RBP32.35■■■□□ 2.77
COL13A1-213ENST00000520267 LTN1O94822 1766 aa32.35■■■□□ 2.77
COL13A1-213ENST00000520267 USP35Q9P2H5 1018 aa32.35■■■□□ 2.77
COL13A1-213ENST00000520267 ADGRL3Q9HAR2 1447 aa32.34■■■□□ 2.77
COL13A1-213ENST00000520267 BCL11AQ9H165 835 aa32.33■■■□□ 2.77
COL13A1-213ENST00000520267 DNAJC5Q9H3Z4 198 aa32.32■■■□□ 2.76
COL13A1-213ENST00000520267 LRRC37A3O60309 1634 aa32.32■■■□□ 2.76
COL13A1-213ENST00000520267 PTPRCP08575 1304 aa32.31■■■□□ 2.76
COL13A1-213ENST00000520267 HTATSF1O43719 755 aaKnown RBP32.31■■■□□ 2.76
COL13A1-213ENST00000520267 ESCO1Q5FWF5 840 aa32.31■■■□□ 2.76
COL13A1-213ENST00000520267 SLC4A2P04920 1241 aa32.3■■■□□ 2.76
COL13A1-213ENST00000520267 NPHP4O75161 1426 aaPredicted RBP32.3■■■□□ 2.76
COL13A1-213ENST00000520267 MFAP1P55081 439 aaKnown RBP32.29■■■□□ 2.76
COL13A1-213ENST00000520267 RTL1A6NKG5 1358 aa32.29■■■□□ 2.76
COL13A1-213ENST00000520267 GNAT3A8MTJ3 354 aa32.29■■■□□ 2.76
COL13A1-213ENST00000520267 BECN1Q14457 450 aa32.29■■■□□ 2.76
COL13A1-213ENST00000520267 PSME1Q06323 249 aa32.28■■■□□ 2.76
COL13A1-213ENST00000520267 NFKBIBQ15653 356 aa32.27■■■□□ 2.76
COL13A1-213ENST00000520267 NFAT5O94916 1531 aa32.27■■■□□ 2.76
COL13A1-213ENST00000520267 MSH6P52701 1360 aa32.26■■■□□ 2.76
COL13A1-213ENST00000520267 USHBP1Q8N6Y0 703 aa32.26■■■□□ 2.75
COL13A1-213ENST00000520267 G2E3Q7L622 706 aa32.25■■■□□ 2.75
COL13A1-213ENST00000520267 C22orf23Q9BZE7 217 aa32.25■■■□□ 2.75
COL13A1-213ENST00000520267 IP6K1Q92551 441 aa32.24■■■□□ 2.75
COL13A1-213ENST00000520267 MAP3K5Q99683 1374 aa32.24■■■□□ 2.75
COL13A1-213ENST00000520267 IL17REQ8NFR9 667 aa32.24■■■□□ 2.75
COL13A1-213ENST00000520267 ATP10DQ9P241 1426 aa32.23■■■□□ 2.75
COL13A1-213ENST00000520267 BMP2KLQ5H9B9 411 aa32.23■■■□□ 2.75
COL13A1-213ENST00000520267 ANKRD44Q8N8A2 993 aa32.21■■■□□ 2.75
COL13A1-213ENST00000520267 DCTPP1Q9H773 170 aa32.21■■■□□ 2.75
COL13A1-213ENST00000520267 MEIS3Q99687 375 aa32.2■■■□□ 2.74
COL13A1-213ENST00000520267 ORAI2Q96SN7 254 aa32.19■■■□□ 2.74
COL13A1-213ENST00000520267 TBC1D2Q9BYX2 928 aa32.19■■■□□ 2.74
COL13A1-213ENST00000520267 CEP85Q6P2H3 762 aa32.18■■■□□ 2.74
COL13A1-213ENST00000520267 RPAP2Q8IXW5 612 aaPredicted RBP32.17■■■□□ 2.74
COL13A1-213ENST00000520267 NBPF6Q5VWK0 638 aa32.17■■■□□ 2.74
COL13A1-213ENST00000520267 NBPF4Q96M43 638 aa32.17■■■□□ 2.74
COL13A1-213ENST00000520267 FAM208AQ9UK61 1670 aaKnown RBP32.17■■■□□ 2.74
COL13A1-213ENST00000520267 ZBTB7CA1YPR0 619 aa32.16■■■□□ 2.74
COL13A1-213ENST00000520267 F6X3S4 739 aa32.16■■■□□ 2.74
COL13A1-213ENST00000520267 KCNH5Q8NCM2 988 aa32.16■■■□□ 2.74
COL13A1-213ENST00000520267 RGPD2P0DJD1 1756 aa32.16■■■□□ 2.74
COL13A1-213ENST00000520267 TAF7Q15545 349 aaPredicted RBP32.15■■■□□ 2.74
COL13A1-213ENST00000520267 XPCQ01831 940 aaPredicted RBP32.14■■■□□ 2.74
COL13A1-213ENST00000520267 SLC4A10Q6U841 1118 aa32.14■■■□□ 2.74
COL13A1-213ENST00000520267 STK31Q9BXU1 1019 aa32.14■■■□□ 2.74
COL13A1-213ENST00000520267 PHRF1Q9P1Y6 1649 aaKnown RBP32.13■■■□□ 2.73
COL13A1-213ENST00000520267 CCDC30Q5VVM6 783 aa32.12■■■□□ 2.73
COL13A1-213ENST00000520267 SLKQ9H2G2 1235 aaPredicted RBP32.11■■■□□ 2.73
COL13A1-213ENST00000520267 BABAM1Q9NWV8 329 aa32.11■■■□□ 2.73
COL13A1-213ENST00000520267 CCT4P50991 539 aaKnown RBP32.11■■■□□ 2.73
COL13A1-213ENST00000520267 NECTIN2Q92692 538 aa32.11■■■□□ 2.73
COL13A1-213ENST00000520267 PLEKHM2Q8IWE5 1019 aa32.1■■■□□ 2.73
COL13A1-213ENST00000520267 FRAT2O75474 233 aaPredicted RBP32.09■■■□□ 2.73
COL13A1-213ENST00000520267 FLIIQ13045 1269 aa32.09■■■□□ 2.73
COL13A1-213ENST00000520267 CACNA1FO60840 1977 aa32.08■■■□□ 2.73
COL13A1-213ENST00000520267 PLEKHG5O94827 1062 aa32.08■■■□□ 2.73
COL13A1-213ENST00000520267 LRRC59Q96AG4 307 aaKnown RBP32.08■■■□□ 2.73
COL13A1-213ENST00000520267 GCP02774 474 aa32.07■■■□□ 2.73
COL13A1-213ENST00000520267 C16orf71Q8IYS4 520 aaPredicted RBP32.07■■■□□ 2.73
COL13A1-213ENST00000520267 ANTXR1Q9H6X2 564 aa32.07■■■□□ 2.73
COL13A1-213ENST00000520267 RBM25P49756 843 aaKnown RBP32.07■■■□□ 2.72
COL13A1-213ENST00000520267 CEMIPQ8WUJ3 1361 aa32.06■■■□□ 2.72
COL13A1-213ENST00000520267 SLIT3O75094 1523 aa32.06■■■□□ 2.72
COL13A1-213ENST00000520267 TBC1D9Q6ZT07 1266 aa32.06■■■□□ 2.72
COL13A1-213ENST00000520267 PROSER2Q86WR7 435 aaPredicted RBP32.06■■■□□ 2.72
COL13A1-213ENST00000520267 SOS1Q07889 1333 aaPredicted RBP32.06■■■□□ 2.72
COL13A1-213ENST00000520267 GSPT1P15170 499 aaKnown RBP32.06■■■□□ 2.72
COL13A1-213ENST00000520267 FKBP5Q13451 457 aaPredicted RBP32.05■■■□□ 2.72
COL13A1-213ENST00000520267 TRPM3Q9HCF6 1732 aaPredicted RBP32.05■■■□□ 2.72
COL13A1-213ENST00000520267 ARHGEF25Q86VW2 580 aa32.04■■■□□ 2.72
COL13A1-213ENST00000520267 LGR6Q9HBX8 967 aa32.04■■■□□ 2.72
COL13A1-213ENST00000520267 LMOD2Q6P5Q4 547 aa32.03■■■□□ 2.72
COL13A1-213ENST00000520267 MED1Q15648 1581 aaPredicted RBP32.03■■■□□ 2.72
COL13A1-213ENST00000520267 SMARCA5O60264 1052 aaPredicted RBP32.02■■■□□ 2.72
COL13A1-213ENST00000520267 OTUD7AQ8TE49 926 aaPredicted RBP32.01■■■□□ 2.72
COL13A1-213ENST00000520267 APBB1O00213 710 aa32.01■■■□□ 2.71
COL13A1-213ENST00000520267 LMO7Q8WWI1 1683 aa32■■■□□ 2.71
COL13A1-213ENST00000520267 TTC22Q5TAA0 569 aa32■■■□□ 2.71
COL13A1-213ENST00000520267 KRT28Q7Z3Y7 464 aa32■■■□□ 2.71
COL13A1-213ENST00000520267 CDC45O75419 566 aa31.99■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms