RNA–Protein interactions for RNA: ENST00000520008.5

POLB-208, Transcript of DNA polymerase beta, humanhuman

TSL 2

Gene POLB, Length 725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-208ENST00000520008 AMPHP49418 695 aa16.55■□□□□ 0.24
POLB-208ENST00000520008 TRIM26Q12899 539 aaPredicted RBP16.55■□□□□ 0.24
POLB-208ENST00000520008 DDX54Q8TDD1 881 aaKnown RBP16.55■□□□□ 0.24
POLB-208ENST00000520008 AKT1S1Q96B36 256 aa16.55■□□□□ 0.24
POLB-208ENST00000520008 ANKRD26Q9UPS8 1709 aa16.55■□□□□ 0.24
POLB-208ENST00000520008 MAP3K5Q99683 1374 aa16.54■□□□□ 0.24
POLB-208ENST00000520008 RRS1Q15050 365 aaKnown RBP16.54■□□□□ 0.24
POLB-208ENST00000520008 SLC27A3Q5K4L6 730 aa16.54■□□□□ 0.24
POLB-208ENST00000520008 SYT17Q9BSW7 474 aa16.54■□□□□ 0.24
POLB-208ENST00000520008 FHDC1Q9C0D6 1143 aaPredicted RBP16.54■□□□□ 0.24
POLB-208ENST00000520008 GGNBP2Q9H3C7 697 aa16.54■□□□□ 0.24
POLB-208ENST00000520008 KAT6BQ8WYB5 2073 aa16.54■□□□□ 0.24
POLB-208ENST00000520008 KIF24Q5T7B8 1368 aa16.53■□□□□ 0.24
POLB-208ENST00000520008 NBPF6Q5VWK0 638 aa16.53■□□□□ 0.24
POLB-208ENST00000520008 NBPF4Q96M43 638 aa16.53■□□□□ 0.24
POLB-208ENST00000520008 INSRP06213 1382 aa16.52■□□□□ 0.24
POLB-208ENST00000520008 ZCRB1Q8TBF4 217 aaKnown RBP16.52■□□□□ 0.24
POLB-208ENST00000520008 SMG6Q86US8 1419 aaKnown RBP16.52■□□□□ 0.23
POLB-208ENST00000520008 FLT4P35916 1363 aa16.51■□□□□ 0.23
POLB-208ENST00000520008 CGNL1Q0VF96 1302 aa16.51■□□□□ 0.23
POLB-208ENST00000520008 PKD1L3Q7Z443 1732 aa16.51■□□□□ 0.23
POLB-208ENST00000520008 DCAF8L1A6NGE4 600 aa16.51■□□□□ 0.23
POLB-208ENST00000520008 PRIM1P49642 420 aaKnown RBP16.51■□□□□ 0.23
POLB-208ENST00000520008 NCAPD2Q15021 1401 aa16.51■□□□□ 0.23
POLB-208ENST00000520008 PNPLA7Q6ZV29 1317 aa16.5■□□□□ 0.23
POLB-208ENST00000520008 TOGARAM1Q9Y4F4 1720 aa16.5■□□□□ 0.23
POLB-208ENST00000520008 CDCA8Q53HL2 280 aa16.49■□□□□ 0.23
POLB-208ENST00000520008 ARXQ96QS3 562 aa16.49■□□□□ 0.23
POLB-208ENST00000520008 CARD14Q9BXL6 1004 aa16.49■□□□□ 0.23
POLB-208ENST00000520008 NSD3Q9BZ95 1437 aa16.48■□□□□ 0.23
POLB-208ENST00000520008 HSP90AB2PQ58FF8 381 aa16.48■□□□□ 0.23
POLB-208ENST00000520008 USHBP1Q8N6Y0 703 aa16.48■□□□□ 0.23
POLB-208ENST00000520008 SLC16A10Q8TF71 515 aa16.48■□□□□ 0.23
POLB-208ENST00000520008 SYTL4Q96C24 671 aaPredicted RBP16.48■□□□□ 0.23
POLB-208ENST00000520008 C5P01031 1676 aa16.48■□□□□ 0.23
POLB-208ENST00000520008 KCNQ4P56696 695 aa16.47■□□□□ 0.23
POLB-208ENST00000520008 TIMELESSQ9UNS1 1208 aa16.46■□□□□ 0.23
POLB-208ENST00000520008 TAF1LQ8IZX4 1826 aa16.46■□□□□ 0.23
POLB-208ENST00000520008 CHD4Q14839 1912 aa16.46■□□□□ 0.23
POLB-208ENST00000520008 RAPGEF4Q8WZA2 1011 aa16.45■□□□□ 0.22
POLB-208ENST00000520008 ITGB4P16144 1822 aa16.45■□□□□ 0.22
POLB-208ENST00000520008 PCDH11XQ9BZA7 1347 aa16.45■□□□□ 0.22
POLB-208ENST00000520008 PCDH11YQ9BZA8 1340 aa16.45■□□□□ 0.22
POLB-208ENST00000520008 CCNL1Q9UK58 526 aaPredicted RBP16.44■□□□□ 0.22
POLB-208ENST00000520008 EMILIN1Q9Y6C2 1016 aa16.44■□□□□ 0.22
POLB-208ENST00000520008 TATP17735 454 aaPredicted RBP16.43■□□□□ 0.22
POLB-208ENST00000520008 TFCP2L1Q9NZI6 479 aa16.43■□□□□ 0.22
POLB-208ENST00000520008 GOLGB1Q14789 3259 aaKnown RBP16.43■□□□□ 0.22
POLB-208ENST00000520008 CLSPNQ9HAW4 1339 aa16.43■□□□□ 0.22
POLB-208ENST00000520008 CYP27B1O15528 508 aa16.42■□□□□ 0.22
POLB-208ENST00000520008 MAP2P11137 1827 aaKnown RBP16.42■□□□□ 0.22
POLB-208ENST00000520008 C4BP0C0L5 1744 aa16.4■□□□□ 0.22
POLB-208ENST00000520008 ZNF784Q8NCA9 323 aaPredicted RBP16.4■□□□□ 0.22
POLB-208ENST00000520008 WASHC2AQ641Q2 1341 aa16.4■□□□□ 0.22
POLB-208ENST00000520008 PALLDQ8WX93 1383 aa16.39■□□□□ 0.21
POLB-208ENST00000520008 POLD1P28340 1107 aa16.39■□□□□ 0.21
POLB-208ENST00000520008 NKX1-1Q15270 411 aaPredicted RBP16.38■□□□□ 0.21
POLB-208ENST00000520008 COL23A1Q86Y22 540 aaPredicted RBP16.38■□□□□ 0.21
POLB-208ENST00000520008 UBR3Q6ZT12 1888 aa16.37■□□□□ 0.21
POLB-208ENST00000520008 PLEKHG2Q9H7P9 1386 aa16.37■□□□□ 0.21
POLB-208ENST00000520008 NLGN2Q8NFZ4 835 aa16.36■□□□□ 0.21
POLB-208ENST00000520008 MPRIPQ6WCQ1 1025 aa16.35■□□□□ 0.21
POLB-208ENST00000520008 EYA1Q99502 592 aa16.35■□□□□ 0.21
POLB-208ENST00000520008 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.35■□□□□ 0.21
POLB-208ENST00000520008 POLKQ9UBT6 870 aa16.35■□□□□ 0.21
POLB-208ENST00000520008 PIGBQ92521 554 aa16.33■□□□□ 0.2
POLB-208ENST00000520008 PPM1GO15355 546 aaPredicted RBP16.32■□□□□ 0.2
POLB-208ENST00000520008 HMGB2P26583 209 aaKnown RBP16.32■□□□□ 0.2
POLB-208ENST00000520008 GPR162Q16538 588 aa16.32■□□□□ 0.2
POLB-208ENST00000520008 AMIGO3Q86WK7 504 aa16.32■□□□□ 0.2
POLB-208ENST00000520008 KLHL34Q8N239 644 aa16.32■□□□□ 0.2
POLB-208ENST00000520008 SMARCC1Q92922 1105 aaPredicted RBP16.32■□□□□ 0.2
POLB-208ENST00000520008 SPG7Q9UQ90 795 aa16.32■□□□□ 0.2
POLB-208ENST00000520008 ZNF831Q5JPB2 1677 aa16.31■□□□□ 0.2
POLB-208ENST00000520008 FLAD1Q8NFF5 587 aa16.31■□□□□ 0.2
POLB-208ENST00000520008 IGSF1Q8N6C5 1336 aa16.3■□□□□ 0.2
POLB-208ENST00000520008 PHKG2P15735 406 aa16.3■□□□□ 0.2
POLB-208ENST00000520008 EIF4A2Q14240 407 aaKnown RBP16.3■□□□□ 0.2
POLB-208ENST00000520008 MSL1Q68DK7 614 aa16.3■□□□□ 0.2
POLB-208ENST00000520008 YBX3P16989 372 aaKnown RBP eCLIP16.29■□□□□ 0.2
POLB-208ENST00000520008 KDRP35968 1356 aa16.28■□□□□ 0.2
POLB-208ENST00000520008 IFNL2Q8IZJ0 200 aa16.28■□□□□ 0.2
POLB-208ENST00000520008 COL5A3P25940 1745 aaPredicted RBP16.28■□□□□ 0.2
POLB-208ENST00000520008 LOC102724428A0A0B4J2F2 783 aa16.27■□□□□ 0.2
POLB-208ENST00000520008 HSPA5P11021 654 aaKnown RBP16.27■□□□□ 0.2
POLB-208ENST00000520008 SIK1P57059 783 aa16.27■□□□□ 0.2
POLB-208ENST00000520008 EIF4G2P78344 907 aaKnown RBP eCLIP16.27■□□□□ 0.2
POLB-208ENST00000520008 LINC00116Q8NCU8 138 aa16.27■□□□□ 0.2
POLB-208ENST00000520008 AK7Q96M32 723 aa16.27■□□□□ 0.2
POLB-208ENST00000520008 PCGF6Q9BYE7 350 aa16.27■□□□□ 0.2
POLB-208ENST00000520008 TMOD3Q9NYL9 352 aa16.27■□□□□ 0.2
POLB-208ENST00000520008 CD2APQ9Y5K6 639 aa16.27■□□□□ 0.2
POLB-208ENST00000520008 SSFA2P28290 1259 aa16.26■□□□□ 0.19
POLB-208ENST00000520008 ASAP1Q9ULH1 1129 aa16.26■□□□□ 0.19
POLB-208ENST00000520008 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.25■□□□□ 0.19
POLB-208ENST00000520008 TNNT2P45379 298 aaPredicted RBP16.25■□□□□ 0.19
POLB-208ENST00000520008 ITPK1Q13572 414 aa16.25■□□□□ 0.19
POLB-208ENST00000520008 PELP1Q8IZL8 1130 aaKnown RBP16.25■□□□□ 0.19
POLB-208ENST00000520008 PANK3Q9H999 370 aa16.25■□□□□ 0.19
POLB-208ENST00000520008 KDM6AO15550 1401 aaPredicted RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms