RNA–Protein interactions for RNA: ENST00000519596.5

PABPC1-211, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-211ENST00000519596 PODNQ7Z5L7 613 aa5.34□□□□□ -1.55
PABPC1-211ENST00000519596 NEDD1Q8NHV4 660 aa5.34□□□□□ -1.55
PABPC1-211ENST00000519596 LRRN4Q8WUT4 740 aa5.34□□□□□ -1.55
PABPC1-211ENST00000519596 TRIM52Q96A61 297 aa5.34□□□□□ -1.55
PABPC1-211ENST00000519596 ZNF395Q9H8N7 513 aaPredicted RBP5.34□□□□□ -1.55
PABPC1-211ENST00000519596 GPR25O00155 361 aa5.33□□□□□ -1.56
PABPC1-211ENST00000519596 NR6A1Q15406 480 aa5.33□□□□□ -1.56
PABPC1-211ENST00000519596 ACDQ96AP0 544 aa5.33□□□□□ -1.56
PABPC1-211ENST00000519596 KCTD15Q96SI1 283 aaPredicted RBP5.33□□□□□ -1.56
PABPC1-211ENST00000519596 GPBP1L1Q9HC44 474 aaPredicted RBP5.33□□□□□ -1.56
PABPC1-211ENST00000519596 MBIPQ9NS73 344 aa5.33□□□□□ -1.56
PABPC1-211ENST00000519596 FOXD4L5Q5VV16 416 aaPredicted RBP5.32□□□□□ -1.56
PABPC1-211ENST00000519596 PPP2R2DQ66LE6 453 aa5.32□□□□□ -1.56
PABPC1-211ENST00000519596 PROCA1Q8NCQ7 364 aaPredicted RBP5.32□□□□□ -1.56
PABPC1-211ENST00000519596 ZNF837Q96EG3 531 aaPredicted RBP5.32□□□□□ -1.56
PABPC1-211ENST00000519596 FAM117AQ9C073 453 aa5.32□□□□□ -1.56
PABPC1-211ENST00000519596 GPSM3Q9Y4H4 160 aa5.32□□□□□ -1.56
PABPC1-211ENST00000519596 NBPF20Q3BBV1 942 aa5.31□□□□□ -1.56
PABPC1-211ENST00000519596 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.31□□□□□ -1.56
PABPC1-211ENST00000519596 SNRPNP63162 240 aaKnown RBP5.3□□□□□ -1.56
PABPC1-211ENST00000519596 DZIP3Q86Y13 1208 aaKnown RBP5.3□□□□□ -1.56
PABPC1-211ENST00000519596 PCMTD1Q96MG8 357 aaPredicted RBP5.3□□□□□ -1.56
PABPC1-211ENST00000519596 LCE3BQ5TA77 95 aa5.29□□□□□ -1.56
PABPC1-211ENST00000519596 KDF1Q8NAX2 398 aaPredicted RBP5.29□□□□□ -1.56
PABPC1-211ENST00000519596 USP17L8P0C7I0 530 aa5.28□□□□□ -1.56
PABPC1-211ENST00000519596 PRKCSHP14314 528 aaPredicted RBP5.28□□□□□ -1.56
PABPC1-211ENST00000519596 RHOQP17081 205 aa5.28□□□□□ -1.56
PABPC1-211ENST00000519596 ITGB7P26010 798 aa5.28□□□□□ -1.56
PABPC1-211ENST00000519596 COL8A1P27658 744 aa5.28□□□□□ -1.56
PABPC1-211ENST00000519596 RAB15P59190 212 aa5.28□□□□□ -1.56
PABPC1-211ENST00000519596 DBN1Q16643 649 aa5.28□□□□□ -1.56
PABPC1-211ENST00000519596 TPRNQ4KMQ1 711 aa5.28□□□□□ -1.56
PABPC1-211ENST00000519596 INTS6LQ5JSJ4 861 aaKnown RBP5.28□□□□□ -1.56
PABPC1-211ENST00000519596 LYSMD3Q7Z3D4 306 aa5.28□□□□□ -1.56
PABPC1-211ENST00000519596 TRIM22Q8IYM9 498 aa5.28□□□□□ -1.56
PABPC1-211ENST00000519596 ADAM32Q8TC27 787 aa5.28□□□□□ -1.56
PABPC1-211ENST00000519596 KRTAP4-12Q9BQ66 201 aa5.28□□□□□ -1.56
PABPC1-211ENST00000519596 TMPRSS4Q9NRS4 437 aa5.28□□□□□ -1.56
PABPC1-211ENST00000519596 RFC5P40937 340 aa5.27□□□□□ -1.57
PABPC1-211ENST00000519596 TMEM259Q4ZIN3 620 aa5.27□□□□□ -1.57
PABPC1-211ENST00000519596 OIP5O43482 229 aa5.26□□□□□ -1.57
PABPC1-211ENST00000519596 ADH1AP07327 375 aa5.26□□□□□ -1.57
PABPC1-211ENST00000519596 ADD1P35611 737 aaKnown RBP5.26□□□□□ -1.57
PABPC1-211ENST00000519596 PRICKLE2Q7Z3G6 844 aa5.26□□□□□ -1.57
PABPC1-211ENST00000519596 ZNF784Q8NCA9 323 aaPredicted RBP5.26□□□□□ -1.57
PABPC1-211ENST00000519596 GTPBP3Q969Y2 492 aaKnown RBP5.26□□□□□ -1.57
PABPC1-211ENST00000519596 GOPCQ9HD26 462 aa5.26□□□□□ -1.57
PABPC1-211ENST00000519596 LRRC4BQ9NT99 713 aa5.26□□□□□ -1.57
PABPC1-211ENST00000519596 PTGIRP43119 386 aa5.25□□□□□ -1.57
PABPC1-211ENST00000519596 NEUROD2Q15784 382 aa5.25□□□□□ -1.57
PABPC1-211ENST00000519596 FOXR1Q6PIV2 292 aa5.25□□□□□ -1.57
PABPC1-211ENST00000519596 RIPOR1Q6ZS17 1223 aa5.25□□□□□ -1.57
PABPC1-211ENST00000519596 ZNF592Q92610 1267 aa5.25□□□□□ -1.57
PABPC1-211ENST00000519596 GMCL1Q96IK5 515 aa5.25□□□□□ -1.57
PABPC1-211ENST00000519596 SHISA8B8ZZ34 492 aa5.24□□□□□ -1.57
PABPC1-211ENST00000519596 LILRA1O75019 489 aa5.24□□□□□ -1.57
PABPC1-211ENST00000519596 FBXO31Q5XUX0 539 aaPredicted RBP5.24□□□□□ -1.57
PABPC1-211ENST00000519596 SEPT12Q8IYM1 358 aa5.24□□□□□ -1.57
PABPC1-211ENST00000519596 EPS8L1Q8TE68 723 aa5.24□□□□□ -1.57
PABPC1-211ENST00000519596 HMX1Q9NP08 348 aaPredicted RBP5.24□□□□□ -1.57
PABPC1-211ENST00000519596 ZNF330Q9Y3S2 320 aaPredicted RBP5.24□□□□□ -1.57
PABPC1-211ENST00000519596 ERVH48-1M5A8F1 160 aa5.23□□□□□ -1.57
PABPC1-211ENST00000519596 MX2P20592 715 aa5.23□□□□□ -1.57
PABPC1-211ENST00000519596 RNF144AP50876 292 aaPredicted RBP5.23□□□□□ -1.57
PABPC1-211ENST00000519596 C1orf229Q6ZS94 237 aaPredicted RBP5.23□□□□□ -1.57
PABPC1-211ENST00000519596 CCDC125Q86Z20 511 aa5.23□□□□□ -1.57
PABPC1-211ENST00000519596 OCSTAMPQ9BR26 566 aa5.23□□□□□ -1.57
PABPC1-211ENST00000519596 ESF1Q9H501 851 aaKnown RBP5.23□□□□□ -1.57
PABPC1-211ENST00000519596 MKL2Q9ULH7 1088 aa5.23□□□□□ -1.57
PABPC1-211ENST00000519596 PCDHB9Q9Y5E1 797 aa5.23□□□□□ -1.57
PABPC1-211ENST00000519596 ZBBXA8MT70 800 aa5.22□□□□□ -1.57
PABPC1-211ENST00000519596 C1QTNF9BB2RNN3 333 aa5.22□□□□□ -1.57
PABPC1-211ENST00000519596 APBB1O00213 710 aa5.22□□□□□ -1.57
PABPC1-211ENST00000519596 RNF20Q5VTR2 975 aa5.22□□□□□ -1.57
PABPC1-211ENST00000519596 ALYREFQ86V81 257 aaKnown RBP5.22□□□□□ -1.57
PABPC1-211ENST00000519596 IL27Q8NEV9 243 aa5.22□□□□□ -1.57
PABPC1-211ENST00000519596 TRERF1Q96PN7 1200 aa5.22□□□□□ -1.57
PABPC1-211ENST00000519596 OXCT2Q9BYC2 517 aaPredicted RBP5.22□□□□□ -1.57
PABPC1-211ENST00000519596 KRTAP9-9Q9BYP9 154 aa5.22□□□□□ -1.57
PABPC1-211ENST00000519596 KRTAP9-4Q9BYQ2 154 aa5.22□□□□□ -1.57
PABPC1-211ENST00000519596 SUV39H2Q9H5I1 410 aa5.22□□□□□ -1.57
PABPC1-211ENST00000519596 MCCD1P59942 119 aaPredicted RBP5.21□□□□□ -1.58
PABPC1-211ENST00000519596 GRIN2CQ14957 1233 aa5.21□□□□□ -1.58
PABPC1-211ENST00000519596 GAS2L1Q99501 681 aaPredicted RBP5.21□□□□□ -1.58
PABPC1-211ENST00000519596 CYLDQ9NQC7 956 aa5.21□□□□□ -1.58
PABPC1-211ENST00000519596 ESPNB1AK53 854 aa5.2□□□□□ -1.58
PABPC1-211ENST00000519596 ATP5J2-PTCD1G3V325 749 aa5.2□□□□□ -1.58
PABPC1-211ENST00000519596 H7C1W4 665 aa5.2□□□□□ -1.58
PABPC1-211ENST00000519596 HOXB4P17483 251 aaPredicted RBP5.2□□□□□ -1.58
PABPC1-211ENST00000519596 ZMYM1Q5SVZ6 1142 aa5.2□□□□□ -1.58
PABPC1-211ENST00000519596 CD163Q86VB7 1156 aa5.2□□□□□ -1.58
PABPC1-211ENST00000519596 SEMA6BQ9H3T3 888 aa5.2□□□□□ -1.58
PABPC1-211ENST00000519596 RRAGCQ9HB90 399 aa5.2□□□□□ -1.58
PABPC1-211ENST00000519596 NSFL1CQ9UNZ2 370 aaKnown RBP5.2□□□□□ -1.58
PABPC1-211ENST00000519596 DYRK1BQ9Y463 629 aa5.2□□□□□ -1.58
PABPC1-211ENST00000519596 CHRNA4P43681 627 aa5.19□□□□□ -1.58
PABPC1-211ENST00000519596 LINC00114Q6XXX2 140 aa5.19□□□□□ -1.58
PABPC1-211ENST00000519596 NLRP3Q96P20 1036 aa5.19□□□□□ -1.58
PABPC1-211ENST00000519596 TRIM34Q9BYJ4 488 aa5.19□□□□□ -1.58
PABPC1-211ENST00000519596 MEN1O00255 615 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms