RNA–Protein interactions for RNA: ENST00000519207.5

SH2D4A-204, Transcript of SH2 domain containing 4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SH2D4A, Length 1,984 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-204ENST00000519207 ITSN1Q15811 1721 aa12.69□□□□□ -0.38
SH2D4A-204ENST00000519207 MEX3CQ5U5Q3 659 aaKnown RBP12.69□□□□□ -0.38
SH2D4A-204ENST00000519207 NME9Q86XW9 330 aa12.69□□□□□ -0.38
SH2D4A-204ENST00000519207 SMC5Q8IY18 1101 aa12.69□□□□□ -0.38
SH2D4A-204ENST00000519207 TMEM57Q8N5G2 664 aa12.69□□□□□ -0.38
SH2D4A-204ENST00000519207 DDX17Q92841 729 aaKnown RBP12.69□□□□□ -0.38
SH2D4A-204ENST00000519207 PDCL3Q9H2J4 239 aa12.69□□□□□ -0.38
SH2D4A-204ENST00000519207 IFT57Q9NWB7 429 aa12.69□□□□□ -0.38
SH2D4A-204ENST00000519207 GNAI1P63096 354 aa12.68□□□□□ -0.38
SH2D4A-204ENST00000519207 LMOD3Q0VAK6 560 aa12.68□□□□□ -0.38
SH2D4A-204ENST00000519207 ARHGAP45Q92619 1136 aa12.68□□□□□ -0.38
SH2D4A-204ENST00000519207 PHACTR3Q96KR7 559 aa12.68□□□□□ -0.38
SH2D4A-204ENST00000519207 TBC1D32Q96NH3 1257 aa12.68□□□□□ -0.38
SH2D4A-204ENST00000519207 CHMP4BQ9H444 224 aaKnown RBP12.68□□□□□ -0.38
SH2D4A-204ENST00000519207 EMILIN1Q9Y6C2 1016 aa12.68□□□□□ -0.38
SH2D4A-204ENST00000519207 ADGRL3Q9HAR2 1447 aa12.68□□□□□ -0.38
SH2D4A-204ENST00000519207 NUTM2BA6NNL0 878 aaPredicted RBP12.67□□□□□ -0.38
SH2D4A-204ENST00000519207 NUTM2EB1AL46 878 aaPredicted RBP12.67□□□□□ -0.38
SH2D4A-204ENST00000519207 FBLN1P23142 703 aa12.67□□□□□ -0.38
SH2D4A-204ENST00000519207 NUTM2AQ8IVF1 878 aaPredicted RBP12.67□□□□□ -0.38
SH2D4A-204ENST00000519207 TPM2P07951 284 aa12.67□□□□□ -0.38
SH2D4A-204ENST00000519207 ZNF853P0CG23 659 aa12.67□□□□□ -0.38
SH2D4A-204ENST00000519207 ROBO2Q9HCK4 1378 aa12.66□□□□□ -0.38
SH2D4A-204ENST00000519207 HMOX1P09601 288 aa12.66□□□□□ -0.38
SH2D4A-204ENST00000519207 ZNF772Q68DY9 489 aaPredicted RBP12.66□□□□□ -0.38
SH2D4A-204ENST00000519207 LRRC59Q96AG4 307 aaKnown RBP12.66□□□□□ -0.38
SH2D4A-204ENST00000519207 VAMP4O75379 141 aa12.65□□□□□ -0.38
SH2D4A-204ENST00000519207 DLG5Q8TDM6 1919 aa12.65□□□□□ -0.38
SH2D4A-204ENST00000519207 PTCH1Q13635 1447 aa12.65□□□□□ -0.38
SH2D4A-204ENST00000519207 MRPL50Q8N5N7 158 aaKnown RBP12.64□□□□□ -0.39
SH2D4A-204ENST00000519207 CFAP44Q96MT7 982 aa12.64□□□□□ -0.39
SH2D4A-204ENST00000519207 ZRANB1Q9UGI0 708 aa12.64□□□□□ -0.39
SH2D4A-204ENST00000519207 NALCNQ8IZF0 1738 aa12.64□□□□□ -0.39
SH2D4A-204ENST00000519207 NRKQ7Z2Y5 1582 aa12.64□□□□□ -0.39
SH2D4A-204ENST00000519207 PRR36Q9H6K5 1346 aa12.64□□□□□ -0.39
SH2D4A-204ENST00000519207 C1orf167Q5SNV9 1468 aa12.63□□□□□ -0.39
SH2D4A-204ENST00000519207 GOLGA6L3A6NEY3 463 aa12.63□□□□□ -0.39
SH2D4A-204ENST00000519207 ORAI2Q96SN7 254 aa12.63□□□□□ -0.39
SH2D4A-204ENST00000519207 ISY1Q9ULR0 285 aaKnown RBP12.63□□□□□ -0.39
SH2D4A-204ENST00000519207 NHSL1Q5SYE7 1610 aa12.63□□□□□ -0.39
SH2D4A-204ENST00000519207 NUCB1Q02818 461 aa12.63□□□□□ -0.39
SH2D4A-204ENST00000519207 MBIPQ9NS73 344 aa12.63□□□□□ -0.39
SH2D4A-204ENST00000519207 TOPAZ1Q8N9V7 1692 aa12.62□□□□□ -0.39
SH2D4A-204ENST00000519207 PLEKHG3A1L390 1219 aa12.62□□□□□ -0.39
SH2D4A-204ENST00000519207 ZBTB7BO15156 539 aaPredicted RBP12.61□□□□□ -0.39
SH2D4A-204ENST00000519207 RRS1Q15050 365 aaKnown RBP12.61□□□□□ -0.39
SH2D4A-204ENST00000519207 THUMPD2Q9BTF0 503 aaKnown RBP12.61□□□□□ -0.39
SH2D4A-204ENST00000519207 PANK2Q9BZ23 570 aa12.61□□□□□ -0.39
SH2D4A-204ENST00000519207 ABCC4O15439 1325 aa12.61□□□□□ -0.39
SH2D4A-204ENST00000519207 ERBB4Q15303 1308 aa12.61□□□□□ -0.39
SH2D4A-204ENST00000519207 ESPNB1AK53 854 aa12.61□□□□□ -0.39
SH2D4A-204ENST00000519207 RXRBP28702 533 aa12.61□□□□□ -0.39
SH2D4A-204ENST00000519207 MRE11P49959 708 aa12.61□□□□□ -0.39
SH2D4A-204ENST00000519207 TSPYL6Q8N831 410 aa12.61□□□□□ -0.39
SH2D4A-204ENST00000519207 AFF2P51816 1311 aa12.6□□□□□ -0.39
SH2D4A-204ENST00000519207 TTC21BQ7Z4L5 1316 aa12.6□□□□□ -0.39
SH2D4A-204ENST00000519207 TWISTNBQ3B726 338 aaPredicted RBP12.6□□□□□ -0.39
SH2D4A-204ENST00000519207 CNKSR2Q8WXI2 1034 aa12.6□□□□□ -0.39
SH2D4A-204ENST00000519207 GCC1Q96CN9 775 aa12.6□□□□□ -0.39
SH2D4A-204ENST00000519207 C8orf37Q96NL8 207 aa12.6□□□□□ -0.39
SH2D4A-204ENST00000519207 KIF24Q5T7B8 1368 aa12.6□□□□□ -0.39
SH2D4A-204ENST00000519207 OVOS2A0A0J9YW53 1432 aa12.6□□□□□ -0.39
SH2D4A-204ENST00000519207 OVOS2Q6IE36 1432 aa12.6□□□□□ -0.39
SH2D4A-204ENST00000519207 TERF1P54274 439 aa12.6□□□□□ -0.39
SH2D4A-204ENST00000519207 SOS2Q07890 1332 aaPredicted RBP12.59□□□□□ -0.39
SH2D4A-204ENST00000519207 HAP1P54257 671 aaPredicted RBP12.59□□□□□ -0.39
SH2D4A-204ENST00000519207 API5Q9BZZ5 524 aaKnown RBP12.59□□□□□ -0.39
SH2D4A-204ENST00000519207 USP6P35125 1406 aa12.59□□□□□ -0.39
SH2D4A-204ENST00000519207 USP31Q70CQ4 1352 aa12.58□□□□□ -0.4
SH2D4A-204ENST00000519207 RBM10P98175 930 aaKnown RBP12.58□□□□□ -0.4
SH2D4A-204ENST00000519207 EIF4A2Q14240 407 aaKnown RBP12.58□□□□□ -0.4
SH2D4A-204ENST00000519207 CHD1LQ86WJ1 897 aa12.58□□□□□ -0.4
SH2D4A-204ENST00000519207 TBC1D2Q9BYX2 928 aa12.58□□□□□ -0.4
SH2D4A-204ENST00000519207 C22orf23Q9BZE7 217 aa12.58□□□□□ -0.4
SH2D4A-204ENST00000519207 ACEP12821 1306 aa12.58□□□□□ -0.4
SH2D4A-204ENST00000519207 ADAMTS2O95450 1211 aa12.58□□□□□ -0.4
SH2D4A-204ENST00000519207 MCM4P33991 863 aa12.57□□□□□ -0.4
SH2D4A-204ENST00000519207 C8orf58Q8NAV2 365 aa12.57□□□□□ -0.4
SH2D4A-204ENST00000519207 UPF1Q92900 1129 aaKnown RBP eCLIP12.57□□□□□ -0.4
SH2D4A-204ENST00000519207 RGPD1P0DJD0 1748 aa12.56□□□□□ -0.4
SH2D4A-204ENST00000519207 SSH2Q76I76 1423 aa12.56□□□□□ -0.4
SH2D4A-204ENST00000519207 ESCO1Q5FWF5 840 aa12.56□□□□□ -0.4
SH2D4A-204ENST00000519207 BMP2KLQ5H9B9 411 aa12.56□□□□□ -0.4
SH2D4A-204ENST00000519207 QTRT2Q9H974 415 aaKnown RBP12.56□□□□□ -0.4
SH2D4A-204ENST00000519207 NGLY1Q96IV0 654 aa12.56□□□□□ -0.4
SH2D4A-204ENST00000519207 LNPKQ9C0E8 428 aa12.56□□□□□ -0.4
SH2D4A-204ENST00000519207 TTC21AQ8NDW8 1320 aa12.55□□□□□ -0.4
SH2D4A-204ENST00000519207 KIAA0232Q92628 1395 aa12.55□□□□□ -0.4
SH2D4A-204ENST00000519207 NUTM2FA1L443 756 aa12.55□□□□□ -0.4
SH2D4A-204ENST00000519207 FAM83GA6ND36 823 aa12.55□□□□□ -0.4
SH2D4A-204ENST00000519207 ELL2O00472 640 aaPredicted RBP12.55□□□□□ -0.4
SH2D4A-204ENST00000519207 MFAP1P55081 439 aaKnown RBP12.55□□□□□ -0.4
SH2D4A-204ENST00000519207 SULT6B1Q6IMI4 303 aa12.55□□□□□ -0.4
SH2D4A-204ENST00000519207 CHL1O00533 1208 aa12.54□□□□□ -0.4
SH2D4A-204ENST00000519207 FOXO3O43524 673 aa12.54□□□□□ -0.4
SH2D4A-204ENST00000519207 PEAK1Q9H792 1746 aa12.54□□□□□ -0.4
SH2D4A-204ENST00000519207 RBM25P49756 843 aaKnown RBP12.54□□□□□ -0.4
SH2D4A-204ENST00000519207 RBM6P78332 1123 aaKnown RBP12.53□□□□□ -0.4
SH2D4A-204ENST00000519207 FGD1P98174 961 aa12.53□□□□□ -0.4
SH2D4A-204ENST00000519207 XPCQ01831 940 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 1241.3 ms