RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 NUP188Q5SRE5 1749 aa18.21■□□□□ 0.51
VEGFA-219ENST00000518824 BCL11BQ9C0K0 894 aaPredicted RBP18.21■□□□□ 0.51
VEGFA-219ENST00000518824 NCAPD2Q15021 1401 aa18.21■□□□□ 0.51
VEGFA-219ENST00000518824 NHSQ6T4R5 1651 aa18.21■□□□□ 0.51
VEGFA-219ENST00000518824 PSDA5PKW4 1024 aaPredicted RBP18.2■□□□□ 0.5
VEGFA-219ENST00000518824 ZCRB1Q8TBF4 217 aaKnown RBP18.2■□□□□ 0.5
VEGFA-219ENST00000518824 KAT6BQ8WYB5 2073 aa18.19■□□□□ 0.5
VEGFA-219ENST00000518824 PROM2Q8N271 834 aa18.18■□□□□ 0.5
VEGFA-219ENST00000518824 RAPGEF4Q8WZA2 1011 aa18.18■□□□□ 0.5
VEGFA-219ENST00000518824 BTAF1O14981 1849 aa18.18■□□□□ 0.5
VEGFA-219ENST00000518824 DOT1LQ8TEK3 1739 aa18.18■□□□□ 0.5
VEGFA-219ENST00000518824 TATP17735 454 aaPredicted RBP18.17■□□□□ 0.5
VEGFA-219ENST00000518824 PKD1L3Q7Z443 1732 aa18.16■□□□□ 0.5
VEGFA-219ENST00000518824 RGPD3A6NKT7 1758 aaPredicted RBP18.15■□□□□ 0.5
VEGFA-219ENST00000518824 RGPD4Q7Z3J3 1758 aa18.15■□□□□ 0.5
VEGFA-219ENST00000518824 PLSCR1O15162 318 aa18.15■□□□□ 0.5
VEGFA-219ENST00000518824 CYP27B1O15528 508 aa18.15■□□□□ 0.5
VEGFA-219ENST00000518824 MTHFSP49914 203 aa18.14■□□□□ 0.49
VEGFA-219ENST00000518824 R3HDM1Q15032 1099 aaKnown RBP18.14■□□□□ 0.49
VEGFA-219ENST00000518824 IGSF1Q8N6C5 1336 aa18.14■□□□□ 0.49
VEGFA-219ENST00000518824 PARD3Q8TEW0 1356 aa18.14■□□□□ 0.49
VEGFA-219ENST00000518824 TOGARAM1Q9Y4F4 1720 aa18.13■□□□□ 0.49
VEGFA-219ENST00000518824 PRIM1P49642 420 aaKnown RBP18.13■□□□□ 0.49
VEGFA-219ENST00000518824 AEBP1Q8IUX7 1158 aa18.13■□□□□ 0.49
VEGFA-219ENST00000518824 NPC1L1Q9UHC9 1359 aa18.13■□□□□ 0.49
VEGFA-219ENST00000518824 IL13P35225 146 aa18.12■□□□□ 0.49
VEGFA-219ENST00000518824 ANO8Q9HCE9 1232 aaPredicted RBP18.12■□□□□ 0.49
VEGFA-219ENST00000518824 SYTL4Q96C24 671 aaPredicted RBP18.11■□□□□ 0.49
VEGFA-219ENST00000518824 TXNRD1Q16881 649 aa18.1■□□□□ 0.49
VEGFA-219ENST00000518824 PCDH11XQ9BZA7 1347 aa18.09■□□□□ 0.49
VEGFA-219ENST00000518824 PCDH11YQ9BZA8 1340 aa18.09■□□□□ 0.49
VEGFA-219ENST00000518824 COL3A1P02461 1466 aaPredicted RBP18.07■□□□□ 0.48
VEGFA-219ENST00000518824 ITGB4P16144 1822 aa18.07■□□□□ 0.48
VEGFA-219ENST00000518824 KCNQ4P56696 695 aa18.07■□□□□ 0.48
VEGFA-219ENST00000518824 LRRC4BQ9NT99 713 aa18.07■□□□□ 0.48
VEGFA-219ENST00000518824 SULT6B1Q6IMI4 303 aa18.06■□□□□ 0.48
VEGFA-219ENST00000518824 PDGFDQ9GZP0 370 aaPredicted RBP18.05■□□□□ 0.48
VEGFA-219ENST00000518824 SPG7Q9UQ90 795 aa18.05■□□□□ 0.48
VEGFA-219ENST00000518824 PAPPAQ13219 1627 aa18.05■□□□□ 0.48
VEGFA-219ENST00000518824 HMOX1P09601 288 aa18.04■□□□□ 0.48
VEGFA-219ENST00000518824 PHKG2P15735 406 aa18.04■□□□□ 0.48
VEGFA-219ENST00000518824 NKX1-1Q15270 411 aaPredicted RBP18.04■□□□□ 0.48
VEGFA-219ENST00000518824 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.04■□□□□ 0.482e-31■□□□□ 9.6
VEGFA-219ENST00000518824 KDRP35968 1356 aa18.04■□□□□ 0.48
VEGFA-219ENST00000518824 LY75O60449 1722 aa18.03■□□□□ 0.48
VEGFA-219ENST00000518824 NBPF14Q5TI25 921 aa18.03■□□□□ 0.48
VEGFA-219ENST00000518824 DIAPH1O60610 1272 aaKnown RBP18.02■□□□□ 0.48
VEGFA-219ENST00000518824 PPP2R1AP30153 589 aa18.02■□□□□ 0.48
VEGFA-219ENST00000518824 MPRIPQ6WCQ1 1025 aa18.02■□□□□ 0.48
VEGFA-219ENST00000518824 IFNL2Q8IZJ0 200 aa18.01■□□□□ 0.47
VEGFA-219ENST00000518824 CASZ1Q86V15 1759 aa18■□□□□ 0.47
VEGFA-219ENST00000518824 DDX10Q13206 875 aaKnown RBP18■□□□□ 0.47
VEGFA-219ENST00000518824 ZNF827Q17R98 1081 aa18■□□□□ 0.47
VEGFA-219ENST00000518824 PIGBQ92521 554 aa18■□□□□ 0.47
VEGFA-219ENST00000518824 KDM6AO15550 1401 aaPredicted RBP17.99■□□□□ 0.47
VEGFA-219ENST00000518824 LRP5O75197 1615 aa17.99■□□□□ 0.47
VEGFA-219ENST00000518824 PLEKHO1Q53GL0 409 aaPredicted RBP17.99■□□□□ 0.47
VEGFA-219ENST00000518824 ZNF530Q6P9A1 599 aaPredicted RBP17.99■□□□□ 0.47
VEGFA-219ENST00000518824 SRCAPQ6ZRS2 3230 aa17.99■□□□□ 0.47
VEGFA-219ENST00000518824 SLC15A2Q16348 729 aa17.98■□□□□ 0.47
VEGFA-219ENST00000518824 TUBGCP6Q96RT7 1819 aa17.97■□□□□ 0.47
VEGFA-219ENST00000518824 U2SURPO15042 1029 aaKnown RBP17.96■□□□□ 0.47
VEGFA-219ENST00000518824 STK32BQ9NY57 414 aa17.96■□□□□ 0.47
VEGFA-219ENST00000518824 PALLDQ8WX93 1383 aa17.95■□□□□ 0.46
VEGFA-219ENST00000518824 PLEKHG2Q9H7P9 1386 aa17.95■□□□□ 0.46
VEGFA-219ENST00000518824 AMOTQ4VCS5 1084 aa17.95■□□□□ 0.46
VEGFA-219ENST00000518824 AKT1S1Q96B36 256 aa17.95■□□□□ 0.46
VEGFA-219ENST00000518824 CCNL1Q9UK58 526 aaPredicted RBP17.95■□□□□ 0.46
VEGFA-219ENST00000518824 ASAP1Q9ULH1 1129 aa17.95■□□□□ 0.46
VEGFA-219ENST00000518824 SLC27A3Q5K4L6 730 aa17.94■□□□□ 0.46
VEGFA-219ENST00000518824 TMOD3Q9NYL9 352 aa17.94■□□□□ 0.46
VEGFA-219ENST00000518824 TAF1LQ8IZX4 1826 aa17.93■□□□□ 0.46
VEGFA-219ENST00000518824 MTHFSDQ2M296 383 aaKnown RBP17.93■□□□□ 0.46
VEGFA-219ENST00000518824 VIRMAQ69YN4 1812 aaKnown RBP17.93■□□□□ 0.46
VEGFA-219ENST00000518824 SCN11AQ9UI33 1791 aa17.92■□□□□ 0.46
VEGFA-219ENST00000518824 ZBTB7AO95365 584 aa17.92■□□□□ 0.46
VEGFA-219ENST00000518824 DCAF5Q96JK2 942 aa17.92■□□□□ 0.46
VEGFA-219ENST00000518824 LGR6Q9HBX8 967 aa17.92■□□□□ 0.46
VEGFA-219ENST00000518824 ATG3Q9NT62 314 aa17.92■□□□□ 0.46
VEGFA-219ENST00000518824 C5P01031 1676 aa17.92■□□□□ 0.46
VEGFA-219ENST00000518824 ZEB1P37275 1124 aaPredicted RBP17.91■□□□□ 0.46
VEGFA-219ENST00000518824 C1orf141Q5JVX7 400 aa17.91■□□□□ 0.46
VEGFA-219ENST00000518824 SMIM5Q71RC9 77 aa17.9■□□□□ 0.46
VEGFA-219ENST00000518824 CFAP53Q96M91 514 aa17.9■□□□□ 0.46
VEGFA-219ENST00000518824 ERVV-2B6SEH9 535 aa17.89■□□□□ 0.45
VEGFA-219ENST00000518824 HSP90AB1P08238 724 aaKnown RBP17.89■□□□□ 0.45
VEGFA-219ENST00000518824 AMIGO3Q86WK7 504 aa17.89■□□□□ 0.45
VEGFA-219ENST00000518824 PHACTR3Q96KR7 559 aa17.89■□□□□ 0.45
VEGFA-219ENST00000518824 SLC4A9Q96Q91 983 aa17.89■□□□□ 0.45
VEGFA-219ENST00000518824 RSPH6AQ9H0K4 717 aa17.89■□□□□ 0.45
VEGFA-219ENST00000518824 ATF5Q9Y2D1 282 aaPredicted RBP17.89■□□□□ 0.45
VEGFA-219ENST00000518824 PNPLA7Q6ZV29 1317 aa17.89■□□□□ 0.45
VEGFA-219ENST00000518824 CABP4P57796 275 aa17.88■□□□□ 0.45
VEGFA-219ENST00000518824 ITPK1Q13572 414 aa17.88■□□□□ 0.45
VEGFA-219ENST00000518824 AKAP4Q5JQC9 854 aa17.88■□□□□ 0.45
VEGFA-219ENST00000518824 NFATC2IPQ8NCF5 419 aa17.88■□□□□ 0.45
VEGFA-219ENST00000518824 SMARCC1Q92922 1105 aaPredicted RBP17.88■□□□□ 0.45
VEGFA-219ENST00000518824 QSER1Q2KHR3 1735 aa17.88■□□□□ 0.45
VEGFA-219ENST00000518824 LOC102724428A0A0B4J2F2 783 aa17.87■□□□□ 0.45
VEGFA-219ENST00000518824 PRKAR2BP31323 418 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms