RNA–Protein interactions for RNA: ENST00000518720.5

TSNARE1-202, Transcript of t-SNARE domain containing 1, humanhuman

TSL 4

Gene TSNARE1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-202ENST00000518720 SHANK3Q9BYB0 1731 aa22.87■■□□□ 1.25
TSNARE1-202ENST00000518720 TATP17735 454 aaPredicted RBP22.86■■□□□ 1.25
TSNARE1-202ENST00000518720 OVOS2A0A0G2JMS6 1433 aa22.85■■□□□ 1.25
TSNARE1-202ENST00000518720 RGS12O14924 1447 aa22.84■■□□□ 1.25
TSNARE1-202ENST00000518720 TNS2Q63HR2 1409 aa22.83■■□□□ 1.25
TSNARE1-202ENST00000518720 CDCA7Q9BWT1 371 aaPredicted RBP22.83■■□□□ 1.25
TSNARE1-202ENST00000518720 RSPH6AQ9H0K4 717 aa22.83■■□□□ 1.25
TSNARE1-202ENST00000518720 PRKAR2BP31323 418 aa22.82■■□□□ 1.24
TSNARE1-202ENST00000518720 SEPT12Q8IYM1 358 aa22.81■■□□□ 1.24
TSNARE1-202ENST00000518720 PNISRQ8TF01 805 aaKnown RBP22.8■■□□□ 1.24
TSNARE1-202ENST00000518720 DDB1Q16531 1140 aa22.79■■□□□ 1.24
TSNARE1-202ENST00000518720 FAM9BQ8IZU0 186 aa22.79■■□□□ 1.24
TSNARE1-202ENST00000518720 ADAMTS8Q9UP79 889 aa22.79■■□□□ 1.24
TSNARE1-202ENST00000518720 FCHSD2O94868 740 aa22.78■■□□□ 1.24
TSNARE1-202ENST00000518720 CCDC146Q8IYE0 955 aa22.78■■□□□ 1.24
TSNARE1-202ENST00000518720 VIRMAQ69YN4 1812 aaKnown RBP22.77■■□□□ 1.24
TSNARE1-202ENST00000518720 MAPK8IP3Q9UPT6 1336 aa22.77■■□□□ 1.24
TSNARE1-202ENST00000518720 EXOC5O00471 708 aa22.76■■□□□ 1.23
TSNARE1-202ENST00000518720 ONECUT3O60422 494 aaPredicted RBP22.76■■□□□ 1.23
TSNARE1-202ENST00000518720 NEFMP07197 916 aa22.76■■□□□ 1.23
TSNARE1-202ENST00000518720 ZCRB1Q8TBF4 217 aaKnown RBP22.76■■□□□ 1.23
TSNARE1-202ENST00000518720 SPG7Q9UQ90 795 aa22.76■■□□□ 1.23
TSNARE1-202ENST00000518720 DLG5Q8TDM6 1919 aa22.76■■□□□ 1.23
TSNARE1-202ENST00000518720 PLEKHO1Q53GL0 409 aaPredicted RBP22.75■■□□□ 1.23
TSNARE1-202ENST00000518720 PNNQ9H307 717 aaKnown RBP22.75■■□□□ 1.23
TSNARE1-202ENST00000518720 PLEKHG2Q9H7P9 1386 aa22.75■■□□□ 1.23
TSNARE1-202ENST00000518720 PCDH11XQ9BZA7 1347 aa22.74■■□□□ 1.23
TSNARE1-202ENST00000518720 PCDH11YQ9BZA8 1340 aa22.74■■□□□ 1.23
TSNARE1-202ENST00000518720 PDE3BQ13370 1112 aa22.73■■□□□ 1.23
TSNARE1-202ENST00000518720 ZNF530Q6P9A1 599 aaPredicted RBP22.73■■□□□ 1.23
TSNARE1-202ENST00000518720 DDX54Q8TDD1 881 aaKnown RBP22.73■■□□□ 1.23
TSNARE1-202ENST00000518720 KAT6BQ8WYB5 2073 aa22.72■■□□□ 1.23
TSNARE1-202ENST00000518720 AMOTQ4VCS5 1084 aa22.72■■□□□ 1.23
TSNARE1-202ENST00000518720 PHACTR3Q96KR7 559 aa22.72■■□□□ 1.23
TSNARE1-202ENST00000518720 PLEKHF1Q96S99 279 aa22.72■■□□□ 1.23
TSNARE1-202ENST00000518720 DOT1LQ8TEK3 1739 aa22.71■■□□□ 1.23
TSNARE1-202ENST00000518720 KRT27Q7Z3Y8 459 aa22.71■■□□□ 1.23
TSNARE1-202ENST00000518720 RUNDC1Q96C34 613 aa22.71■■□□□ 1.23
TSNARE1-202ENST00000518720 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.71■■□□□ 1.23
TSNARE1-202ENST00000518720 MTHFSDQ2M296 383 aaKnown RBP22.7■■□□□ 1.22
TSNARE1-202ENST00000518720 C1orf141Q5JVX7 400 aa22.69■■□□□ 1.22
TSNARE1-202ENST00000518720 FAM182BQ5T319 152 aa22.69■■□□□ 1.22
TSNARE1-202ENST00000518720 GAS2L2Q8NHY3 880 aa22.69■■□□□ 1.22
TSNARE1-202ENST00000518720 TOGARAM1Q9Y4F4 1720 aa22.68■■□□□ 1.22
TSNARE1-202ENST00000518720 CYP27B1O15528 508 aa22.68■■□□□ 1.22
TSNARE1-202ENST00000518720 MARCH10Q8NA82 808 aaPredicted RBP22.68■■□□□ 1.22
TSNARE1-202ENST00000518720 SCN11AQ9UI33 1791 aa22.68■■□□□ 1.22
TSNARE1-202ENST00000518720 SBF2Q86WG5 1849 aa22.66■■□□□ 1.22
TSNARE1-202ENST00000518720 MAP3K5Q99683 1374 aa22.66■■□□□ 1.22
TSNARE1-202ENST00000518720 SENP3-EIF4A1A0A087X0R7 540 aa22.66■■□□□ 1.22
TSNARE1-202ENST00000518720 PHKG2P15735 406 aa22.66■■□□□ 1.22
TSNARE1-202ENST00000518720 IFNL2Q8IZJ0 200 aa22.66■■□□□ 1.22
TSNARE1-202ENST00000518720 NFE2L2Q16236 605 aa22.65■■□□□ 1.22
TSNARE1-202ENST00000518720 RRP7AQ9Y3A4 280 aaKnown RBP22.65■■□□□ 1.22
TSNARE1-202ENST00000518720 AKAP4Q5JQC9 854 aa22.64■■□□□ 1.21
TSNARE1-202ENST00000518720 ITGB4P16144 1822 aa22.64■■□□□ 1.21
TSNARE1-202ENST00000518720 APAF1O14727 1248 aa22.63■■□□□ 1.21
TSNARE1-202ENST00000518720 NEUROD2Q15784 382 aa22.63■■□□□ 1.21
TSNARE1-202ENST00000518720 TMPOP42166 694 aaKnown RBP22.62■■□□□ 1.21
TSNARE1-202ENST00000518720 KDM6AO15550 1401 aaPredicted RBP22.62■■□□□ 1.21
TSNARE1-202ENST00000518720 NHSQ6T4R5 1651 aa22.62■■□□□ 1.21
TSNARE1-202ENST00000518720 ADAMTS7Q9UKP4 1686 aa22.62■■□□□ 1.21
TSNARE1-202ENST00000518720 GNAT3A8MTJ3 354 aa22.6■■□□□ 1.21
TSNARE1-202ENST00000518720 HSP90AB1P08238 724 aaKnown RBP22.6■■□□□ 1.21
TSNARE1-202ENST00000518720 MPRIPQ6WCQ1 1025 aa22.6■■□□□ 1.21
TSNARE1-202ENST00000518720 RIPK4P57078 832 aa22.59■■□□□ 1.21
TSNARE1-202ENST00000518720 RTF1Q92541 710 aaKnown RBP22.59■■□□□ 1.21
TSNARE1-202ENST00000518720 ACSBG1Q96GR2 724 aa22.59■■□□□ 1.21
TSNARE1-202ENST00000518720 FAM196AQ6ZSG2 479 aa22.58■■□□□ 1.21
TSNARE1-202ENST00000518720 NKX1-1Q15270 411 aaPredicted RBP22.57■■□□□ 1.2
TSNARE1-202ENST00000518720 DCAF5Q96JK2 942 aa22.57■■□□□ 1.2
TSNARE1-202ENST00000518720 BTAF1O14981 1849 aa22.57■■□□□ 1.2
TSNARE1-202ENST00000518720 SIPA1L3O60292 1781 aaPredicted RBP22.56■■□□□ 1.2
TSNARE1-202ENST00000518720 DCTN1Q14203 1278 aa22.56■■□□□ 1.2
TSNARE1-202ENST00000518720 MCM10Q7L590 875 aa22.56■■□□□ 1.2
TSNARE1-202ENST00000518720 SYTL4Q96C24 671 aaPredicted RBP22.56■■□□□ 1.2
TSNARE1-202ENST00000518720 SALL2Q9Y467 1007 aaPredicted RBP22.56■■□□□ 1.2
TSNARE1-202ENST00000518720 BCL9O00512 1426 aa22.56■■□□□ 1.2
TSNARE1-202ENST00000518720 MRC1P22897 1456 aa22.55■■□□□ 1.2
TSNARE1-202ENST00000518720 TNS1Q9HBL0 1735 aaKnown RBP22.55■■□□□ 1.2
TSNARE1-202ENST00000518720 RNMTO43148 476 aaKnown RBP22.55■■□□□ 1.2
TSNARE1-202ENST00000518720 LMOD3Q0VAK6 560 aa22.55■■□□□ 1.2
TSNARE1-202ENST00000518720 LGR6Q9HBX8 967 aa22.55■■□□□ 1.2
TSNARE1-202ENST00000518720 THUMPD2Q9BTF0 503 aaKnown RBP22.53■■□□□ 1.2
TSNARE1-202ENST00000518720 EP400Q96L91 3159 aa22.52■■□□□ 1.2
TSNARE1-202ENST00000518720 IL17REQ8NFR9 667 aa22.52■■□□□ 1.2
TSNARE1-202ENST00000518720 HTATSF1O43719 755 aaKnown RBP22.51■■□□□ 1.19
TSNARE1-202ENST00000518720 PRIM1P49642 420 aaKnown RBP22.51■■□□□ 1.19
TSNARE1-202ENST00000518720 TRIM35Q9UPQ4 493 aa22.51■■□□□ 1.19
TSNARE1-202ENST00000518720 CEMIPQ8WUJ3 1361 aa22.5■■□□□ 1.19
TSNARE1-202ENST00000518720 KCNQ2O43526 872 aa22.5■■□□□ 1.19
TSNARE1-202ENST00000518720 TRIM37O94972 964 aa22.5■■□□□ 1.19
TSNARE1-202ENST00000518720 CABP4P57796 275 aa22.5■■□□□ 1.19
TSNARE1-202ENST00000518720 TEFQ10587 303 aa22.5■■□□□ 1.19
TSNARE1-202ENST00000518720 TMOD3Q9NYL9 352 aa22.5■■□□□ 1.19
TSNARE1-202ENST00000518720 ERVV-2B6SEH9 535 aa22.49■■□□□ 1.19
TSNARE1-202ENST00000518720 HNRNPUQ00839 825 aaKnown RBP eCLIP22.48■■□□□ 1.19
TSNARE1-202ENST00000518720 PTF1AQ7RTS3 328 aa22.48■■□□□ 1.19
TSNARE1-202ENST00000518720 SLC52A2Q9HAB3 445 aa22.48■■□□□ 1.19
TSNARE1-202ENST00000518720 PAPPAQ13219 1627 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms