RNA–Protein interactions for RNA: ENST00000518442.5

EIF3E-204, Transcript of eukaryotic translation initiation factor 3 subunit E, humanhuman

TSL 1 (best)

Gene EIF3E, Length 1,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3E-204ENST00000518442 ERBB3P21860 1342 aa12.14□□□□□ -0.47
EIF3E-204ENST00000518442 MAP2P11137 1827 aaKnown RBP12.14□□□□□ -0.47
EIF3E-204ENST00000518442 GABBR2O75899 941 aa12.14□□□□□ -0.47
EIF3E-204ENST00000518442 TCP11L2Q8N4U5 519 aa12.14□□□□□ -0.47
EIF3E-204ENST00000518442 NSD2O96028 1365 aa12.14□□□□□ -0.47
EIF3E-204ENST00000518442 CRB1P82279 1406 aa12.13□□□□□ -0.47
EIF3E-204ENST00000518442 ZNF316A6NFI3 1004 aaPredicted RBP12.13□□□□□ -0.47
EIF3E-204ENST00000518442 VASPP50552 380 aaPredicted RBP12.12□□□□□ -0.47
EIF3E-204ENST00000518442 CREBZFQ9NS37 354 aa12.12□□□□□ -0.47
EIF3E-204ENST00000518442 FLT4P35916 1363 aa12.12□□□□□ -0.47
EIF3E-204ENST00000518442 BLMP54132 1417 aaPredicted RBP12.11□□□□□ -0.47
EIF3E-204ENST00000518442 RGPD2P0DJD1 1756 aa12.11□□□□□ -0.47
EIF3E-204ENST00000518442 CD44P16070 742 aaKnown RBP12.11□□□□□ -0.47
EIF3E-204ENST00000518442 CARD10Q9BWT7 1032 aa12.11□□□□□ -0.47
EIF3E-204ENST00000518442 BRWD3Q6RI45 1802 aa12.11□□□□□ -0.47
EIF3E-204ENST00000518442 RTL1A6NKG5 1358 aa12.1□□□□□ -0.47
EIF3E-204ENST00000518442 MTHFSP49914 203 aa12.1□□□□□ -0.47
EIF3E-204ENST00000518442 NBPF6Q5VWK0 638 aa12.1□□□□□ -0.47
EIF3E-204ENST00000518442 NBPF4Q96M43 638 aa12.1□□□□□ -0.47
EIF3E-204ENST00000518442 CDK12Q9NYV4 1490 aaPredicted RBP12.09□□□□□ -0.47
EIF3E-204ENST00000518442 INSRP06213 1382 aa12.09□□□□□ -0.47
EIF3E-204ENST00000518442 KRT27Q7Z3Y8 459 aa12.09□□□□□ -0.47
EIF3E-204ENST00000518442 ABCC6O95255 1503 aa12.09□□□□□ -0.47
EIF3E-204ENST00000518442 SMG6Q86US8 1419 aaKnown RBP12.09□□□□□ -0.47
EIF3E-204ENST00000518442 ONECUT3O60422 494 aaPredicted RBP12.08□□□□□ -0.48
EIF3E-204ENST00000518442 EIF4A2Q14240 407 aaKnown RBP12.08□□□□□ -0.48
EIF3E-204ENST00000518442 BARGINQ6ZT62 677 aa12.08□□□□□ -0.48
EIF3E-204ENST00000518442 PDE3BQ13370 1112 aa12.07□□□□□ -0.48
EIF3E-204ENST00000518442 THRAP3Q9Y2W1 955 aaKnown RBP12.07□□□□□ -0.48
EIF3E-204ENST00000518442 EP400Q96L91 3159 aa12.07□□□□□ -0.48
EIF3E-204ENST00000518442 THSD7AQ9UPZ6 1657 aa12.06□□□□□ -0.48
EIF3E-204ENST00000518442 NPC1L1Q9UHC9 1359 aa12.06□□□□□ -0.48
EIF3E-204ENST00000518442 SOCS7O14512 581 aa12.06□□□□□ -0.48
EIF3E-204ENST00000518442 IL2RBP14784 551 aa12.06□□□□□ -0.48
EIF3E-204ENST00000518442 DDB1Q16531 1140 aa12.06□□□□□ -0.48
EIF3E-204ENST00000518442 EYA1Q99502 592 aa12.06□□□□□ -0.48
EIF3E-204ENST00000518442 PPP2R1AP30153 589 aa12.05□□□□□ -0.48
EIF3E-204ENST00000518442 KIF24Q5T7B8 1368 aa12.05□□□□□ -0.48
EIF3E-204ENST00000518442 DISP2A7MBM2 1401 aa12.04□□□□□ -0.48
EIF3E-204ENST00000518442 EXOC5O00471 708 aa12.04□□□□□ -0.48
EIF3E-204ENST00000518442 AEBP1Q8IUX7 1158 aa12.04□□□□□ -0.48
EIF3E-204ENST00000518442 DDX54Q8TDD1 881 aaKnown RBP12.04□□□□□ -0.48
EIF3E-204ENST00000518442 MEGF6O75095 1541 aa12.04□□□□□ -0.48
EIF3E-204ENST00000518442 WNK3Q9BYP7 1800 aa12.04□□□□□ -0.48
EIF3E-204ENST00000518442 LRRC37A3O60309 1634 aa12.04□□□□□ -0.48
EIF3E-204ENST00000518442 FAM208AQ9UK61 1670 aaKnown RBP12.03□□□□□ -0.48
EIF3E-204ENST00000518442 U2SURPO15042 1029 aaKnown RBP12.03□□□□□ -0.48
EIF3E-204ENST00000518442 HMOX1P09601 288 aa12.03□□□□□ -0.48
EIF3E-204ENST00000518442 MARCH10Q8NA82 808 aaPredicted RBP12.03□□□□□ -0.48
EIF3E-204ENST00000518442 RAPGEF4Q8WZA2 1011 aa12.03□□□□□ -0.48
EIF3E-204ENST00000518442 UPF1Q92900 1129 aaKnown RBP eCLIP12.03□□□□□ -0.48
EIF3E-204ENST00000518442 TATP17735 454 aaPredicted RBP12.02□□□□□ -0.49
EIF3E-204ENST00000518442 IL13P35225 146 aa12.02□□□□□ -0.49
EIF3E-204ENST00000518442 PLCD3Q8N3E9 789 aa12.02□□□□□ -0.49
EIF3E-204ENST00000518442 KAT6BQ8WYB5 2073 aa12.02□□□□□ -0.49
EIF3E-204ENST00000518442 PARP4Q9UKK3 1724 aaKnown RBP12.01□□□□□ -0.49
EIF3E-204ENST00000518442 DIAPH1O60610 1272 aaKnown RBP12.01□□□□□ -0.49
EIF3E-204ENST00000518442 TRIM37O94972 964 aa12.01□□□□□ -0.49
EIF3E-204ENST00000518442 SULT6B1Q6IMI4 303 aa12.01□□□□□ -0.49
EIF3E-204ENST00000518442 MIER1Q8N108 512 aa12.01□□□□□ -0.49
EIF3E-204ENST00000518442 ACSBG1Q96GR2 724 aa12.01□□□□□ -0.49
EIF3E-204ENST00000518442 CDCA7Q9BWT1 371 aaPredicted RBP12.01□□□□□ -0.49
EIF3E-204ENST00000518442 PARD3Q8TEW0 1356 aa12.01□□□□□ -0.49
EIF3E-204ENST00000518442 PTF1AQ7RTS3 328 aa12□□□□□ -0.49
EIF3E-204ENST00000518442 ZCRB1Q8TBF4 217 aaKnown RBP12□□□□□ -0.49
EIF3E-204ENST00000518442 TNS2Q63HR2 1409 aa12□□□□□ -0.49
EIF3E-204ENST00000518442 CFAP53Q96M91 514 aa11.99□□□□□ -0.49
EIF3E-204ENST00000518442 IGSF1Q8N6C5 1336 aa11.99□□□□□ -0.49
EIF3E-204ENST00000518442 COL3A1P02461 1466 aaPredicted RBP11.98□□□□□ -0.49
EIF3E-204ENST00000518442 OVOS2A0A0G2JMS6 1433 aa11.98□□□□□ -0.49
EIF3E-204ENST00000518442 CLCN6P51797 869 aa11.98□□□□□ -0.49
EIF3E-204ENST00000518442 FAM196AQ6ZSG2 479 aa11.98□□□□□ -0.49
EIF3E-204ENST00000518442 DEFB132Q7Z7B7 95 aa11.98□□□□□ -0.49
EIF3E-204ENST00000518442 PRKRIP1Q9H875 184 aaPredicted RBP11.98□□□□□ -0.49
EIF3E-204ENST00000518442 KCNQ2O43526 872 aa11.97□□□□□ -0.49
EIF3E-204ENST00000518442 RALBP1Q15311 655 aa11.97□□□□□ -0.49
EIF3E-204ENST00000518442 MYBBP1AQ9BQG0 1328 aaKnown RBP11.96□□□□□ -0.49
EIF3E-204ENST00000518442 U2AF1L5P0DN76 240 aaPredicted RBP11.96□□□□□ -0.49
EIF3E-204ENST00000518442 U2AF1Q01081 240 aaKnown RBP eCLIP11.96□□□□□ -0.49
EIF3E-204ENST00000518442 SF3B2Q13435 895 aaKnown RBP11.96□□□□□ -0.49
EIF3E-204ENST00000518442 SYTL4Q96C24 671 aaPredicted RBP11.96□□□□□ -0.49
EIF3E-204ENST00000518442 CYP27B1O15528 508 aa11.95□□□□□ -0.5
EIF3E-204ENST00000518442 NCAPD2Q15021 1401 aa11.94□□□□□ -0.5
EIF3E-204ENST00000518442 RGPD1P0DJD0 1748 aa11.94□□□□□ -0.5
EIF3E-204ENST00000518442 SHANK3Q9BYB0 1731 aa11.94□□□□□ -0.5
EIF3E-204ENST00000518442 APBA3O96018 575 aa11.94□□□□□ -0.5
EIF3E-204ENST00000518442 EN1Q05925 392 aaPredicted RBP11.94□□□□□ -0.5
EIF3E-204ENST00000518442 ZNF530Q6P9A1 599 aaPredicted RBP11.94□□□□□ -0.5
EIF3E-204ENST00000518442 SPG7Q9UQ90 795 aa11.94□□□□□ -0.5
EIF3E-204ENST00000518442 NUDCQ9Y266 331 aa11.94□□□□□ -0.5
EIF3E-204ENST00000518442 PCDH11XQ9BZA7 1347 aa11.93□□□□□ -0.5
EIF3E-204ENST00000518442 PCDH11YQ9BZA8 1340 aa11.93□□□□□ -0.5
EIF3E-204ENST00000518442 ANP32CO43423 234 aa11.93□□□□□ -0.5
EIF3E-204ENST00000518442 PRIM1P49642 420 aaKnown RBP11.93□□□□□ -0.5
EIF3E-204ENST00000518442 CCDC184Q52MB2 194 aa11.93□□□□□ -0.5
EIF3E-204ENST00000518442 IFNLR1Q8IU57 520 aaPredicted RBP11.93□□□□□ -0.5
EIF3E-204ENST00000518442 PRKAR2BP31323 418 aa11.92□□□□□ -0.5
EIF3E-204ENST00000518442 PLEKHO1Q53GL0 409 aaPredicted RBP11.92□□□□□ -0.5
EIF3E-204ENST00000518442 ZNF579Q8NAF0 562 aaKnown RBP11.92□□□□□ -0.5
EIF3E-204ENST00000518442 KDRP35968 1356 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms