RNA–Protein interactions for RNA: ENST00000517730.5

PCM1-204, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 2,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-204ENST00000517730 ATP10DQ9P241 1426 aa18.55■□□□□ 0.56
PCM1-204ENST00000517730 ELL2O00472 640 aaPredicted RBP18.54■□□□□ 0.56
PCM1-204ENST00000517730 BRD1O95696 1058 aa18.54■□□□□ 0.56
PCM1-204ENST00000517730 MYRIPQ8NFW9 859 aa18.54■□□□□ 0.56
PCM1-204ENST00000517730 CCDC94Q9BW85 323 aaPredicted RBP18.54■□□□□ 0.56
PCM1-204ENST00000517730 NSFL1CQ9UNZ2 370 aaKnown RBP18.54■□□□□ 0.56
PCM1-204ENST00000517730 CFAP65Q6ZU64 1925 aaKnown RBP18.54■□□□□ 0.56
PCM1-204ENST00000517730 PTPRMP28827 1452 aa18.54■□□□□ 0.56
PCM1-204ENST00000517730 PRIMPOLQ96LW4 560 aa18.54■□□□□ 0.56
PCM1-204ENST00000517730 HAP1P54257 671 aaPredicted RBP18.53■□□□□ 0.56
PCM1-204ENST00000517730 UVSSAQ2YD98 709 aa18.53■□□□□ 0.56
PCM1-204ENST00000517730 FAM184AQ8NB25 1140 aa18.53■□□□□ 0.56
PCM1-204ENST00000517730 ARID3AQ99856 593 aa18.53■□□□□ 0.56
PCM1-204ENST00000517730 POLKQ9UBT6 870 aa18.53■□□□□ 0.56
PCM1-204ENST00000517730 HMGN5P82970 282 aaKnown RBP18.53■□□□□ 0.56
PCM1-204ENST00000517730 C8orf58Q8NAV2 365 aa18.53■□□□□ 0.56
PCM1-204ENST00000517730 RNF214Q8ND24 703 aa18.52■□□□□ 0.56
PCM1-204ENST00000517730 TMX3Q96JJ7 454 aa18.52■□□□□ 0.56
PCM1-204ENST00000517730 CEP85Q6P2H3 762 aa18.52■□□□□ 0.55
PCM1-204ENST00000517730 INTS4Q96HW7 963 aaKnown RBP18.52■□□□□ 0.55
PCM1-204ENST00000517730 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.52■□□□□ 0.55
PCM1-204ENST00000517730 CUL4AQ13619 759 aa18.51■□□□□ 0.55
PCM1-204ENST00000517730 NUTM2DQ5VT03 806 aaPredicted RBP18.51■□□□□ 0.55
PCM1-204ENST00000517730 GGT6Q6P531 493 aa18.51■□□□□ 0.55
PCM1-204ENST00000517730 OTUD7AQ8TE49 926 aaPredicted RBP18.51■□□□□ 0.55
PCM1-204ENST00000517730 STK26Q9P289 416 aa18.51■□□□□ 0.55
PCM1-204ENST00000517730 CPSF1Q10570 1443 aaKnown RBP18.51■□□□□ 0.55
PCM1-204ENST00000517730 MINK1Q8N4C8 1332 aaPredicted RBP18.5■□□□□ 0.55
PCM1-204ENST00000517730 HMOX1P09601 288 aa18.5■□□□□ 0.55
PCM1-204ENST00000517730 UTP14CQ5TAP6 766 aaKnown RBP18.5■□□□□ 0.55
PCM1-204ENST00000517730 YTHDC2Q9H6S0 1430 aaKnown RBP18.5■□□□□ 0.55
PCM1-204ENST00000517730 NEK4P51957 841 aa18.5■□□□□ 0.55
PCM1-204ENST00000517730 OSBPL3Q9H4L5 887 aa18.5■□□□□ 0.55
PCM1-204ENST00000517730 RIMS2Q9UQ26 1411 aa18.49■□□□□ 0.55
PCM1-204ENST00000517730 MCCP23508 829 aa18.49■□□□□ 0.55
PCM1-204ENST00000517730 GTF2F1P35269 517 aaKnown RBP eCLIP18.49■□□□□ 0.55
PCM1-204ENST00000517730 PIBF1Q8WXW3 757 aa18.49■□□□□ 0.55
PCM1-204ENST00000517730 MLH3Q9UHC1 1453 aa18.49■□□□□ 0.55
PCM1-204ENST00000517730 DNTTIP2Q5QJE6 756 aaKnown RBP18.48■□□□□ 0.55
PCM1-204ENST00000517730 PRAM1Q96QH2 718 aa18.48■□□□□ 0.55
PCM1-204ENST00000517730 RTL1A6NKG5 1358 aa18.48■□□□□ 0.55
PCM1-204ENST00000517730 ANAPC15P60006 121 aa18.48■□□□□ 0.55
PCM1-204ENST00000517730 HMMRO75330 724 aa18.47■□□□□ 0.55
PCM1-204ENST00000517730 IL13P35225 146 aa18.47■□□□□ 0.55
PCM1-204ENST00000517730 CHAMP1Q96JM3 812 aa18.47■□□□□ 0.55
PCM1-204ENST00000517730 SIGLEC1Q9BZZ2 1709 aa18.47■□□□□ 0.55
PCM1-204ENST00000517730 CDK12Q9NYV4 1490 aaPredicted RBP18.46■□□□□ 0.55
PCM1-204ENST00000517730 FOXD4L5Q5VV16 416 aaPredicted RBP18.46■□□□□ 0.55
PCM1-204ENST00000517730 FOXD4L4Q8WXT5 416 aaPredicted RBP18.46■□□□□ 0.55
PCM1-204ENST00000517730 CDK19Q9BWU1 502 aa18.46■□□□□ 0.55
PCM1-204ENST00000517730 CABP1Q9NZU7 370 aa18.46■□□□□ 0.55
PCM1-204ENST00000517730 RGS12O14924 1447 aa18.46■□□□□ 0.55
PCM1-204ENST00000517730 PTPRCP08575 1304 aa18.46■□□□□ 0.55
PCM1-204ENST00000517730 SMARCA5O60264 1052 aaPredicted RBP18.46■□□□□ 0.55
PCM1-204ENST00000517730 KLHL34Q8N239 644 aa18.46■□□□□ 0.55
PCM1-204ENST00000517730 ATP7BP35670 1465 aa18.45■□□□□ 0.54
PCM1-204ENST00000517730 ARHGEF40Q8TER5 1519 aa18.45■□□□□ 0.54
PCM1-204ENST00000517730 DMTNQ08495 405 aa18.45■□□□□ 0.54
PCM1-204ENST00000517730 LETM1O95202 739 aaPredicted RBP18.45■□□□□ 0.54
PCM1-204ENST00000517730 NOLC1Q14978 699 aaKnown RBP eCLIP18.45■□□□□ 0.54
PCM1-204ENST00000517730 POGZQ7Z3K3 1410 aa18.44■□□□□ 0.54
PCM1-204ENST00000517730 PLEKHG5O94827 1062 aa18.44■□□□□ 0.54
PCM1-204ENST00000517730 PDE1AP54750 535 aa18.44■□□□□ 0.54
PCM1-204ENST00000517730 IL17RAQ96F46 866 aa18.44■□□□□ 0.54
PCM1-204ENST00000517730 WDR33Q9C0J8 1336 aaKnown RBP18.43■□□□□ 0.54
PCM1-204ENST00000517730 MSH6P52701 1360 aa18.43■□□□□ 0.54
PCM1-204ENST00000517730 ESYT1Q9BSJ8 1104 aa18.43■□□□□ 0.54
PCM1-204ENST00000517730 SLC52A1Q9NWF4 448 aa18.43■□□□□ 0.54
PCM1-204ENST00000517730 MAP2P11137 1827 aaKnown RBP18.43■□□□□ 0.54
PCM1-204ENST00000517730 DLG5Q8TDM6 1919 aa18.42■□□□□ 0.54
PCM1-204ENST00000517730 SSH2Q76I76 1423 aa18.42■□□□□ 0.54
PCM1-204ENST00000517730 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.42■□□□□ 0.542e-9■■□□□ 14.3
PCM1-204ENST00000517730 TMEM87AQ8NBN3 555 aa18.42■□□□□ 0.54
PCM1-204ENST00000517730 SPTLC3Q9NUV7 552 aa18.42■□□□□ 0.54
PCM1-204ENST00000517730 APBB1O00213 710 aa18.42■□□□□ 0.54
PCM1-204ENST00000517730 AATKQ6ZMQ8 1374 aa18.42■□□□□ 0.54
PCM1-204ENST00000517730 KIAA0232Q92628 1395 aa18.41■□□□□ 0.54
PCM1-204ENST00000517730 CCDC183Q5T5S1 534 aa18.41■□□□□ 0.54
PCM1-204ENST00000517730 IDI1Q13907 227 aa18.41■□□□□ 0.54
PCM1-204ENST00000517730 KIF3AQ9Y496 699 aa18.41■□□□□ 0.54
PCM1-204ENST00000517730 FKBP5Q13451 457 aaPredicted RBP18.4■□□□□ 0.54
PCM1-204ENST00000517730 MEIS3Q99687 375 aa18.4■□□□□ 0.54
PCM1-204ENST00000517730 EPB41L2O43491 1005 aaKnown RBP18.4■□□□□ 0.54
PCM1-204ENST00000517730 USP48Q86UV5 1035 aa18.4■□□□□ 0.54
PCM1-204ENST00000517730 GTPBP4Q9BZE4 634 aaKnown RBP18.4■□□□□ 0.54
PCM1-204ENST00000517730 EMILIN1Q9Y6C2 1016 aa18.4■□□□□ 0.54
PCM1-204ENST00000517730 ZSCAN20P17040 1043 aaPredicted RBP18.39■□□□□ 0.53
PCM1-204ENST00000517730 FBLN1P23142 703 aa18.39■□□□□ 0.53
PCM1-204ENST00000517730 ZNF710Q8N1W2 664 aa18.39■□□□□ 0.53
PCM1-204ENST00000517730 ADCY5O95622 1261 aa18.39■□□□□ 0.53
PCM1-204ENST00000517730 USP25Q9UHP3 1055 aa18.39■□□□□ 0.53
PCM1-204ENST00000517730 GADD45BO75293 160 aaPredicted RBP18.38■□□□□ 0.53
PCM1-204ENST00000517730 PRDM10Q9NQV6 1147 aa18.38■□□□□ 0.53
PCM1-204ENST00000517730 FAM83GA6ND36 823 aa18.38■□□□□ 0.53
PCM1-204ENST00000517730 TPM3P06753 285 aa18.38■□□□□ 0.53
PCM1-204ENST00000517730 MX1P20591 662 aa18.37■□□□□ 0.53
PCM1-204ENST00000517730 EDC4Q6P2E9 1401 aaKnown RBP18.37■□□□□ 0.53
PCM1-204ENST00000517730 CHL1O00533 1208 aa18.36■□□□□ 0.53
PCM1-204ENST00000517730 PODXL2Q9NZ53 605 aa18.36■□□□□ 0.53
PCM1-204ENST00000517730 SALL3Q9BXA9 1300 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms