RNA–Protein interactions for RNA: ENST00000517671.5

NPM1-204, Transcript of nucleophosmin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPM1, Length 1,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-204ENST00000517671 RSBN1LQ6PCB5 846 aaPredicted RBP12.27□□□□□ -0.45
NPM1-204ENST00000517671 LRRC7Q96NW7 1537 aa12.26□□□□□ -0.45
NPM1-204ENST00000517671 NCOA2Q15596 1464 aa12.26□□□□□ -0.45
NPM1-204ENST00000517671 C6orf229H3BNL8 230 aa12.26□□□□□ -0.45
NPM1-204ENST00000517671 ADH1BP00325 375 aa12.26□□□□□ -0.45
NPM1-204ENST00000517671 NKX2-3Q8TAU0 364 aa12.26□□□□□ -0.45
NPM1-204ENST00000517671 POLR1AO95602 1720 aaPredicted RBP12.25□□□□□ -0.45
NPM1-204ENST00000517671 CAMSAP2Q08AD1 1489 aa12.25□□□□□ -0.45
NPM1-204ENST00000517671 FAM135BQ49AJ0 1406 aa12.25□□□□□ -0.45
NPM1-204ENST00000517671 GFRA3O60609 400 aa12.25□□□□□ -0.45
NPM1-204ENST00000517671 GGCXP38435 758 aa12.25□□□□□ -0.45
NPM1-204ENST00000517671 CLK2P49760 499 aaKnown RBP12.25□□□□□ -0.45
NPM1-204ENST00000517671 SH3D19Q5HYK7 790 aa12.25□□□□□ -0.45
NPM1-204ENST00000517671 BRICD5Q6PL45 260 aa12.25□□□□□ -0.45
NPM1-204ENST00000517671 ARHGEF5Q12774 1597 aa12.25□□□□□ -0.45
NPM1-204ENST00000517671 TLL1O43897 1013 aa12.24□□□□□ -0.45
NPM1-204ENST00000517671 CSPP1Q1MSJ5 1256 aa12.24□□□□□ -0.45
NPM1-204ENST00000517671 SCAF11Q99590 1463 aaKnown RBP12.24□□□□□ -0.45
NPM1-204ENST00000517671 ARHGAP31Q2M1Z3 1444 aa12.23□□□□□ -0.45
NPM1-204ENST00000517671 RNF19BQ6ZMZ0 732 aa12.23□□□□□ -0.45
NPM1-204ENST00000517671 THAP11Q96EK4 314 aa12.23□□□□□ -0.45
NPM1-204ENST00000517671 USB1Q9BQ65 265 aaKnown RBP12.23□□□□□ -0.45
NPM1-204ENST00000517671 PCDHGC3Q9UN70 934 aa12.23□□□□□ -0.45
NPM1-204ENST00000517671 LCE2BO14633 110 aa12.22□□□□□ -0.45
NPM1-204ENST00000517671 MTMR2Q13614 643 aa12.22□□□□□ -0.45
NPM1-204ENST00000517671 TRAF7Q6Q0C0 670 aa12.22□□□□□ -0.45
NPM1-204ENST00000517671 PCMTD1Q96MG8 357 aaPredicted RBP12.22□□□□□ -0.45
NPM1-204ENST00000517671 SLC6A16Q9GZN6 736 aa12.22□□□□□ -0.45
NPM1-204ENST00000517671 ERVK-7P63135 1459 aa12.22□□□□□ -0.45
NPM1-204ENST00000517671 KANK1Q14678 1352 aa12.22□□□□□ -0.45
NPM1-204ENST00000517671 SYNMO15061 1565 aa12.21□□□□□ -0.45
NPM1-204ENST00000517671 SPDYE5A6NIY4 337 aa12.21□□□□□ -0.45
NPM1-204ENST00000517671 NUTM2BA6NNL0 878 aaPredicted RBP12.21□□□□□ -0.45
NPM1-204ENST00000517671 NUTM2EB1AL46 878 aaPredicted RBP12.21□□□□□ -0.45
NPM1-204ENST00000517671 KCNA6P17658 529 aa12.21□□□□□ -0.45
NPM1-204ENST00000517671 LTKP29376 864 aa12.21□□□□□ -0.45
NPM1-204ENST00000517671 TUSC1Q2TAM9 212 aa12.21□□□□□ -0.45
NPM1-204ENST00000517671 NUTM2DQ5VT03 806 aaPredicted RBP12.21□□□□□ -0.45
NPM1-204ENST00000517671 NUTM2AQ8IVF1 878 aaPredicted RBP12.21□□□□□ -0.45
NPM1-204ENST00000517671 ZBTB3Q9H5J0 574 aa12.21□□□□□ -0.45
NPM1-204ENST00000517671 GOPCQ9HD26 462 aa12.21□□□□□ -0.45
NPM1-204ENST00000517671 IQGAP1P46940 1657 aa12.21□□□□□ -0.45
NPM1-204ENST00000517671 MYOM3Q5VTT5 1437 aa12.21□□□□□ -0.46
NPM1-204ENST00000517671 ABCC3O15438 1527 aa12.2□□□□□ -0.46
NPM1-204ENST00000517671 RETREG3Q86VR2 466 aa12.2□□□□□ -0.46
NPM1-204ENST00000517671 SYMPKQ92797 1274 aaKnown RBP12.2□□□□□ -0.46
NPM1-204ENST00000517671 LIMD1Q9UGP4 676 aa12.2□□□□□ -0.46
NPM1-204ENST00000517671 PCDHB15Q9Y5E8 787 aa12.2□□□□□ -0.46
NPM1-204ENST00000517671 RNF17Q9BXT8 1623 aaKnown RBP12.2□□□□□ -0.46
NPM1-204ENST00000517671 ZC3H13Q5T200 1668 aaKnown RBP12.2□□□□□ -0.46
NPM1-204ENST00000517671 PRPF38BQ5VTL8 546 aaKnown RBP12.19□□□□□ -0.46
NPM1-204ENST00000517671 SLC52A1Q9NWF4 448 aa12.19□□□□□ -0.46
NPM1-204ENST00000517671 TMEM2Q9UHN6 1383 aa12.19□□□□□ -0.46
NPM1-204ENST00000517671 SLIT1O75093 1534 aa12.19□□□□□ -0.46
NPM1-204ENST00000517671 ARHGAP23Q9P227 1491 aa12.19□□□□□ -0.46
NPM1-204ENST00000517671 MAST1Q9Y2H9 1570 aa12.18□□□□□ -0.46
NPM1-204ENST00000517671 PRKD2Q9BZL6 878 aa12.18□□□□□ -0.46
NPM1-204ENST00000517671 RGS17Q9UGC6 210 aaPredicted RBP12.18□□□□□ -0.46
NPM1-204ENST00000517671 DUOX2Q9NRD8 1548 aa12.18□□□□□ -0.46
NPM1-204ENST00000517671 PPP1R18Q6NYC8 613 aa12.17□□□□□ -0.46
NPM1-204ENST00000517671 PROSER2Q86WR7 435 aaPredicted RBP12.17□□□□□ -0.46
NPM1-204ENST00000517671 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.17□□□□□ -0.46
NPM1-204ENST00000517671 EIF2AK4Q9P2K8 1649 aaKnown RBP12.17□□□□□ -0.46
NPM1-204ENST00000517671 ERBINQ96RT1 1412 aa12.17□□□□□ -0.46
NPM1-204ENST00000517671 ALKQ9UM73 1620 aa12.16□□□□□ -0.46
NPM1-204ENST00000517671 S1PR4O95977 384 aa12.16□□□□□ -0.46
NPM1-204ENST00000517671 HRCP23327 699 aa12.16□□□□□ -0.46
NPM1-204ENST00000517671 MSS51Q4VC12 460 aa12.16□□□□□ -0.46
NPM1-204ENST00000517671 FAM160A2Q8N612 972 aaPredicted RBP12.16□□□□□ -0.46
NPM1-204ENST00000517671 LRRC9Q6ZRR7 1453 aa12.16□□□□□ -0.46
NPM1-204ENST00000517671 PROCA1Q8NCQ7 364 aaPredicted RBP12.15□□□□□ -0.46
NPM1-204ENST00000517671 MAP3K1Q13233 1512 aa12.15□□□□□ -0.46
NPM1-204ENST00000517671 TMEM94Q12767 1356 aa12.14□□□□□ -0.47
NPM1-204ENST00000517671 KIF15Q9NS87 1388 aa12.14□□□□□ -0.47
NPM1-204ENST00000517671 MSH6P52701 1360 aa12.14□□□□□ -0.47
NPM1-204ENST00000517671 NRG2O14511 850 aaPredicted RBP12.13□□□□□ -0.47
NPM1-204ENST00000517671 LILRB3O75022 631 aa12.13□□□□□ -0.47
NPM1-204ENST00000517671 IDI1Q13907 227 aa12.13□□□□□ -0.47
NPM1-204ENST00000517671 QPCTQ16769 361 aa12.13□□□□□ -0.47
NPM1-204ENST00000517671 PRR7Q8TB68 274 aa12.13□□□□□ -0.47
NPM1-204ENST00000517671 CABLES1Q8TDN4 633 aa12.13□□□□□ -0.47
NPM1-204ENST00000517671 RRP7BPQ9NSQ0 103 aa12.13□□□□□ -0.47
NPM1-204ENST00000517671 SLAIN2Q9P270 581 aa12.13□□□□□ -0.47
NPM1-204ENST00000517671 V9GY48 417 aaPredicted RBP12.12□□□□□ -0.47
NPM1-204ENST00000517671 NCOA3Q9Y6Q9 1424 aa12.12□□□□□ -0.47
NPM1-204ENST00000517671 JCADQ9P266 1359 aa12.12□□□□□ -0.47
NPM1-204ENST00000517671 ZNF772Q68DY9 489 aaPredicted RBP12.11□□□□□ -0.47
NPM1-204ENST00000517671 POTEAQ6S8J7 498 aa12.11□□□□□ -0.47
NPM1-204ENST00000517671 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.11□□□□□ -0.47
NPM1-204ENST00000517671 TSC1Q92574 1164 aa12.11□□□□□ -0.47
NPM1-204ENST00000517671 VPS8Q8N3P4 1428 aa12.11□□□□□ -0.47
NPM1-204ENST00000517671 ANKRD30AQ9BXX3 1397 aa12.11□□□□□ -0.47
NPM1-204ENST00000517671 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.11□□□□□ -0.47
NPM1-204ENST00000517671 SPATA31A6Q5VVP1 1343 aa12.1□□□□□ -0.47
NPM1-204ENST00000517671 RNF223E7ERA6 249 aa12.1□□□□□ -0.47
NPM1-204ENST00000517671 JUNDP17535 347 aa12.1□□□□□ -0.47
NPM1-204ENST00000517671 SLC26A8Q96RN1 970 aa12.1□□□□□ -0.47
NPM1-204ENST00000517671 PRDM9Q9NQV7 894 aa12.1□□□□□ -0.47
NPM1-204ENST00000517671 NKTRP30414 1462 aaKnown RBP12.09□□□□□ -0.47
NPM1-204ENST00000517671 UBR1Q8IWV7 1749 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms