RNA–Protein interactions for RNA: ENST00000516428.1

RNU4-54P-201, Transcript of RNA, U4 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU4-54P, Length 129 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-54P-201ENST00000516428 NANOS1Q8WY41 292 aaKnown RBP1.03□□□□□ -2.24
RNU4-54P-201ENST00000516428 KCTD15Q96SI1 283 aaPredicted RBP1.03□□□□□ -2.24
RNU4-54P-201ENST00000516428 CARD14Q9BXL6 1004 aa1.03□□□□□ -2.24
RNU4-54P-201ENST00000516428 CFHR5Q9BXR6 569 aa1.03□□□□□ -2.24
RNU4-54P-201ENST00000516428 EFCC1Q9HA90 598 aa1.03□□□□□ -2.24
RNU4-54P-201ENST00000516428 RRAGCQ9HB90 399 aa1.03□□□□□ -2.24
RNU4-54P-201ENST00000516428 GOPCQ9HD26 462 aa1.03□□□□□ -2.24
RNU4-54P-201ENST00000516428 MBIPQ9NS73 344 aa1.03□□□□□ -2.24
RNU4-54P-201ENST00000516428 ANKIB1Q9P2G1 1089 aa1.03□□□□□ -2.24
RNU4-54P-201ENST00000516428 PRR12Q9ULL5 1215 aa1.03□□□□□ -2.24
RNU4-54P-201ENST00000516428 SCO2A0A1W2PP80 73 aa1.02□□□□□ -2.25
RNU4-54P-201ENST00000516428 MOXD2PA6NHM9 499 aa1.02□□□□□ -2.25
RNU4-54P-201ENST00000516428 MEN1O00255 615 aa1.02□□□□□ -2.25
RNU4-54P-201ENST00000516428 GNB5O14775 395 aa1.02□□□□□ -2.25
RNU4-54P-201ENST00000516428 GSC2O15499 205 aa1.02□□□□□ -2.25
RNU4-54P-201ENST00000516428 SIAH2O43255 324 aa1.02□□□□□ -2.25
RNU4-54P-201ENST00000516428 SPINT1O43278 529 aa1.02□□□□□ -2.25
RNU4-54P-201ENST00000516428 RAD21O60216 631 aa1.02□□□□□ -2.25
RNU4-54P-201ENST00000516428 PTCD1O75127 700 aaKnown RBP1.02□□□□□ -2.25
RNU4-54P-201ENST00000516428 PPFIA3O75145 1194 aa1.02□□□□□ -2.25
RNU4-54P-201ENST00000516428 ZMYND10O75800 440 aa1.02□□□□□ -2.25
RNU4-54P-201ENST00000516428 GNRH1P01148 92 aa1.02□□□□□ -2.25
RNU4-54P-201ENST00000516428 F11P03951 625 aa1.02□□□□□ -2.25
RNU4-54P-201ENST00000516428 ADH1AP07327 375 aa1.02□□□□□ -2.25
RNU4-54P-201ENST00000516428 BCRP11274 1271 aa1.02□□□□□ -2.25
RNU4-54P-201ENST00000516428 BMP4P12644 408 aa1.02□□□□□ -2.25
RNU4-54P-201ENST00000516428 SNRPBP14678 240 aaKnown RBP1.02□□□□□ -2.25
RNU4-54P-201ENST00000516428 TIMP2P16035 220 aa1.02□□□□□ -2.25
RNU4-54P-201ENST00000516428 EPB42P16452 691 aa1.02□□□□□ -2.25
RNU4-54P-201ENST00000516428 HRCP23327 699 aa1.02□□□□□ -2.25
RNU4-54P-201ENST00000516428 GMPRP36959 345 aa1.02□□□□□ -2.25
RNU4-54P-201ENST00000516428 TXKP42681 527 aa1.02□□□□□ -2.25
RNU4-54P-201ENST00000516428 RELBQ01201 579 aa1.02□□□□□ -2.25
RNU4-54P-201ENST00000516428 NRG1Q02297 640 aaPredicted RBP1.02□□□□□ -2.25
RNU4-54P-201ENST00000516428 PTSQ03393 145 aa1.02□□□□□ -2.25
RNU4-54P-201ENST00000516428 SOS2Q07890 1332 aaPredicted RBP1.02□□□□□ -2.25
RNU4-54P-201ENST00000516428 SKIV2LQ15477 1246 aaKnown RBP1.02□□□□□ -2.25
RNU4-54P-201ENST00000516428 RTN1Q16799 776 aa1.02□□□□□ -2.25
RNU4-54P-201ENST00000516428 WASHC4Q2M389 1173 aa1.02□□□□□ -2.25
RNU4-54P-201ENST00000516428 SLFNL1Q499Z3 407 aa1.02□□□□□ -2.25
RNU4-54P-201ENST00000516428 PPP1R26Q5T8A7 1209 aaPredicted RBP1.02□□□□□ -2.25
RNU4-54P-201ENST00000516428 CC2D2BQ6DHV5 1058 aa1.02□□□□□ -2.25
RNU4-54P-201ENST00000516428 GPAT2Q6NUI2 795 aa1.02□□□□□ -2.25
RNU4-54P-201ENST00000516428 TBC1D9Q6ZT07 1266 aa1.02□□□□□ -2.25
RNU4-54P-201ENST00000516428 DHX30Q7L2E3 1194 aaKnown RBP eCLIP1.02□□□□□ -2.25
RNU4-54P-201ENST00000516428 TRIM22Q8IYM9 498 aa1.02□□□□□ -2.25
RNU4-54P-201ENST00000516428 CCDC155Q8N6L0 562 aa1.02□□□□□ -2.25
RNU4-54P-201ENST00000516428 TTC16Q8NEE8 873 aa1.02□□□□□ -2.25
RNU4-54P-201ENST00000516428 GIMAP7Q8NHV1 300 aa1.02□□□□□ -2.25
RNU4-54P-201ENST00000516428 RBSNQ9H1K0 784 aa1.02□□□□□ -2.25
RNU4-54P-201ENST00000516428 TIMMDC1Q9NPL8 285 aa1.02□□□□□ -2.25
RNU4-54P-201ENST00000516428 AVENQ9NQS1 362 aaPredicted RBP1.02□□□□□ -2.25
RNU4-54P-201ENST00000516428 PRDM9Q9NQV7 894 aa1.02□□□□□ -2.25
RNU4-54P-201ENST00000516428 MAP10Q9P2G4 905 aa1.02□□□□□ -2.25
RNU4-54P-201ENST00000516428 ZNF777Q9ULD5 760 aaPredicted RBP1.02□□□□□ -2.25
RNU4-54P-201ENST00000516428 ATXN7L1Q9ULK2 861 aaPredicted RBP1.02□□□□□ -2.25
RNU4-54P-201ENST00000516428 ADAMTS8Q9UP79 889 aa1.02□□□□□ -2.25
RNU4-54P-201ENST00000516428 DYRK1BQ9Y463 629 aa1.02□□□□□ -2.25
RNU4-54P-201ENST00000516428 GPC6Q9Y625 555 aaPredicted RBP1.02□□□□□ -2.25
RNU4-54P-201ENST00000516428 FIGNL2A6NMB9 653 aa1.01□□□□□ -2.25
RNU4-54P-201ENST00000516428 ZBBXA8MT70 800 aa1.01□□□□□ -2.25
RNU4-54P-201ENST00000516428 K7ELQ4 463 aaPredicted RBP1.01□□□□□ -2.25
RNU4-54P-201ENST00000516428 SOCS7O14512 581 aa1.01□□□□□ -2.25
RNU4-54P-201ENST00000516428 TRIM66O15016 1216 aa1.01□□□□□ -2.25
RNU4-54P-201ENST00000516428 PAX4O43316 350 aa1.01□□□□□ -2.25
RNU4-54P-201ENST00000516428 AP1G2O75843 785 aa1.01□□□□□ -2.25
RNU4-54P-201ENST00000516428 ADAMTS2O95450 1211 aa1.01□□□□□ -2.25
RNU4-54P-201ENST00000516428 SPATA31C1P0DKV0 1188 aa1.01□□□□□ -2.25
RNU4-54P-201ENST00000516428 SLURP2P0DP57 97 aa1.01□□□□□ -2.25
RNU4-54P-201ENST00000516428 BMP1P13497 986 aa1.01□□□□□ -2.25
RNU4-54P-201ENST00000516428 ADH6P28332 368 aa1.01□□□□□ -2.25
RNU4-54P-201ENST00000516428 IRS1P35568 1242 aa1.01□□□□□ -2.25
RNU4-54P-201ENST00000516428 GRIK1P39086 918 aa1.01□□□□□ -2.25
RNU4-54P-201ENST00000516428 PTGIRP43119 386 aa1.01□□□□□ -2.25
RNU4-54P-201ENST00000516428 PRIM1P49642 420 aaKnown RBP1.01□□□□□ -2.25
RNU4-54P-201ENST00000516428 RNF144AP50876 292 aaPredicted RBP1.01□□□□□ -2.25
RNU4-54P-201ENST00000516428 ATP1A2P50993 1020 aa1.01□□□□□ -2.25
RNU4-54P-201ENST00000516428 RAC1P63000 192 aa1.01□□□□□ -2.25
RNU4-54P-201ENST00000516428 SKOR1P84550 965 aa1.01□□□□□ -2.25
RNU4-54P-201ENST00000516428 PDE4DQ08499 809 aa1.01□□□□□ -2.25
RNU4-54P-201ENST00000516428 TRIM28Q13263 835 aaKnown RBP1.01□□□□□ -2.25
RNU4-54P-201ENST00000516428 SEMA3FQ13275 785 aa1.01□□□□□ -2.25
RNU4-54P-201ENST00000516428 LAMC2Q13753 1193 aa1.01□□□□□ -2.25
RNU4-54P-201ENST00000516428 MAP7D1Q3KQU3 841 aa1.01□□□□□ -2.25
RNU4-54P-201ENST00000516428 ERFEQ4G0M1 354 aa1.01□□□□□ -2.25
RNU4-54P-201ENST00000516428 SH3D19Q5HYK7 790 aa1.01□□□□□ -2.25
RNU4-54P-201ENST00000516428 PLA2G2CQ5R387 149 aa1.01□□□□□ -2.25
RNU4-54P-201ENST00000516428 DIEXFQ68CQ4 756 aaKnown RBP1.01□□□□□ -2.25
RNU4-54P-201ENST00000516428 BICDL1Q6ZP65 573 aa1.01□□□□□ -2.25
RNU4-54P-201ENST00000516428 Q6ZVU0 165 aa1.01□□□□□ -2.25
RNU4-54P-201ENST00000516428 NLRP8Q86W28 1048 aa1.01□□□□□ -2.25
RNU4-54P-201ENST00000516428 TRIM50Q86XT4 487 aa1.01□□□□□ -2.25
RNU4-54P-201ENST00000516428 CACTIN-AS1Q8N1I8 211 aa1.01□□□□□ -2.25
RNU4-54P-201ENST00000516428 BANK1Q8NDB2 785 aa1.01□□□□□ -2.25
RNU4-54P-201ENST00000516428 ZC3H15Q8WU90 426 aaKnown RBP1.01□□□□□ -2.25
RNU4-54P-201ENST00000516428 ITPKCQ96DU7 683 aa1.01□□□□□ -2.25
RNU4-54P-201ENST00000516428 CNTNAP3BQ96NU0 1288 aa1.01□□□□□ -2.25
RNU4-54P-201ENST00000516428 PNMA5Q96PV4 448 aa1.01□□□□□ -2.25
RNU4-54P-201ENST00000516428 ZSCAN10Q96SZ4 725 aaPredicted RBP1.01□□□□□ -2.25
RNU4-54P-201ENST00000516428 GAS2L1Q99501 681 aaPredicted RBP1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms