RNA–Protein interactions for RNA: ENST00000516201.1

SCARNA5-201, small Cajal body-specific RNA 5, humanhuman

BASIC

Gene SCARNA5, Length 276 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA5-201ENST00000516201 PNNQ9H307 717 aaKnown RBP8.76□□□□□ -1.01
SCARNA5-201ENST00000516201 BCL9O00512 1426 aa8.76□□□□□ -1.01
SCARNA5-201ENST00000516201 SCN11AQ9UI33 1791 aa8.76□□□□□ -1.01
SCARNA5-201ENST00000516201 BRWD3Q6RI45 1802 aa8.75□□□□□ -1.01
SCARNA5-201ENST00000516201 IL2RBP14784 551 aa8.75□□□□□ -1.01
SCARNA5-201ENST00000516201 PRKAR2BP31323 418 aa8.75□□□□□ -1.01
SCARNA5-201ENST00000516201 NGEFQ8N5V2 710 aa8.75□□□□□ -1.01
SCARNA5-201ENST00000516201 USHBP1Q8N6Y0 703 aa8.75□□□□□ -1.01
SCARNA5-201ENST00000516201 MRC1P22897 1456 aa8.75□□□□□ -1.01
SCARNA5-201ENST00000516201 SIPA1L3O60292 1781 aaPredicted RBP8.74□□□□□ -1.01
SCARNA5-201ENST00000516201 HMOX1P09601 288 aa8.74□□□□□ -1.01
SCARNA5-201ENST00000516201 AMOTQ4VCS5 1084 aa8.74□□□□□ -1.01
SCARNA5-201ENST00000516201 RAPGEF4Q8WZA2 1011 aa8.74□□□□□ -1.01
SCARNA5-201ENST00000516201 RUNDC1Q96C34 613 aa8.74□□□□□ -1.01
SCARNA5-201ENST00000516201 SBF2Q86WG5 1849 aa8.73□□□□□ -1.01
SCARNA5-201ENST00000516201 KAT6BQ8WYB5 2073 aa8.73□□□□□ -1.01
SCARNA5-201ENST00000516201 TATP17735 454 aaPredicted RBP8.73□□□□□ -1.01
SCARNA5-201ENST00000516201 RBM6P78332 1123 aaKnown RBP8.73□□□□□ -1.01
SCARNA5-201ENST00000516201 PHACTR3Q96KR7 559 aa8.73□□□□□ -1.01
SCARNA5-201ENST00000516201 QTRT2Q9H974 415 aaKnown RBP8.73□□□□□ -1.01
SCARNA5-201ENST00000516201 TOGARAM1Q9Y4F4 1720 aa8.73□□□□□ -1.01
SCARNA5-201ENST00000516201 NKX1-1Q15270 411 aaPredicted RBP8.72□□□□□ -1.01
SCARNA5-201ENST00000516201 NFE2L2Q16236 605 aa8.72□□□□□ -1.01
SCARNA5-201ENST00000516201 CCDC27Q2M243 656 aa8.72□□□□□ -1.01
SCARNA5-201ENST00000516201 GAS2L2Q8NHY3 880 aa8.72□□□□□ -1.01
SCARNA5-201ENST00000516201 ITGB4P16144 1822 aa8.72□□□□□ -1.01
SCARNA5-201ENST00000516201 ZNF521Q96K83 1311 aa8.72□□□□□ -1.01
SCARNA5-201ENST00000516201 PCDH11XQ9BZA7 1347 aa8.72□□□□□ -1.01
SCARNA5-201ENST00000516201 PCDH11YQ9BZA8 1340 aa8.72□□□□□ -1.01
SCARNA5-201ENST00000516201 CEMIPQ8WUJ3 1361 aa8.72□□□□□ -1.01
SCARNA5-201ENST00000516201 MAP3K5Q99683 1374 aa8.72□□□□□ -1.01
SCARNA5-201ENST00000516201 RGS12O14924 1447 aa8.71□□□□□ -1.01
SCARNA5-201ENST00000516201 CYP27B1O15528 508 aa8.71□□□□□ -1.02
SCARNA5-201ENST00000516201 HTATSF1O43719 755 aaKnown RBP8.71□□□□□ -1.02
SCARNA5-201ENST00000516201 TMPOP42166 694 aaKnown RBP8.71□□□□□ -1.02
SCARNA5-201ENST00000516201 MTHFSDQ2M296 383 aaKnown RBP8.71□□□□□ -1.02
SCARNA5-201ENST00000516201 PLEKHO1Q53GL0 409 aaPredicted RBP8.71□□□□□ -1.02
SCARNA5-201ENST00000516201 POTEAQ6S8J7 498 aa8.71□□□□□ -1.02
SCARNA5-201ENST00000516201 FAM9BQ8IZU0 186 aa8.71□□□□□ -1.02
SCARNA5-201ENST00000516201 ZCRB1Q8TBF4 217 aaKnown RBP8.71□□□□□ -1.02
SCARNA5-201ENST00000516201 KDM6AO15550 1401 aaPredicted RBP8.71□□□□□ -1.02
SCARNA5-201ENST00000516201 PHKG2P15735 406 aa8.7□□□□□ -1.02
SCARNA5-201ENST00000516201 FAM98CQ17RN3 349 aaKnown RBP8.7□□□□□ -1.02
SCARNA5-201ENST00000516201 AKAP4Q5JQC9 854 aa8.7□□□□□ -1.02
SCARNA5-201ENST00000516201 SPG7Q9UQ90 795 aa8.7□□□□□ -1.02
SCARNA5-201ENST00000516201 DOT1LQ8TEK3 1739 aa8.7□□□□□ -1.02
SCARNA5-201ENST00000516201 MAPK8IP3Q9UPT6 1336 aa8.7□□□□□ -1.02
SCARNA5-201ENST00000516201 PAPPAQ13219 1627 aa8.69□□□□□ -1.02
SCARNA5-201ENST00000516201 NHSQ6T4R5 1651 aa8.69□□□□□ -1.02
SCARNA5-201ENST00000516201 KDM3BQ7LBC6 1761 aa8.69□□□□□ -1.02
SCARNA5-201ENST00000516201 APAF1O14727 1248 aa8.69□□□□□ -1.02
SCARNA5-201ENST00000516201 RXRBP28702 533 aa8.69□□□□□ -1.02
SCARNA5-201ENST00000516201 ZNF530Q6P9A1 599 aaPredicted RBP8.69□□□□□ -1.02
SCARNA5-201ENST00000516201 CCDC146Q8IYE0 955 aa8.69□□□□□ -1.02
SCARNA5-201ENST00000516201 USP35Q9P2H5 1018 aa8.69□□□□□ -1.02
SCARNA5-201ENST00000516201 TRIM35Q9UPQ4 493 aa8.69□□□□□ -1.02
SCARNA5-201ENST00000516201 CCDC9Q9Y3X0 531 aaKnown RBP8.69□□□□□ -1.02
SCARNA5-201ENST00000516201 EXOC5O00471 708 aa8.68□□□□□ -1.02
SCARNA5-201ENST00000516201 NEFMP07197 916 aa8.68□□□□□ -1.02
SCARNA5-201ENST00000516201 HSP90AB1P08238 724 aaKnown RBP8.68□□□□□ -1.02
SCARNA5-201ENST00000516201 LMOD3Q0VAK6 560 aa8.68□□□□□ -1.02
SCARNA5-201ENST00000516201 DDB1Q16531 1140 aa8.68□□□□□ -1.02
SCARNA5-201ENST00000516201 SEPT12Q8IYM1 358 aa8.68□□□□□ -1.02
SCARNA5-201ENST00000516201 IFNL2Q8IZJ0 200 aa8.68□□□□□ -1.02
SCARNA5-201ENST00000516201 ZBED9Q6R2W3 1325 aa8.68□□□□□ -1.02
SCARNA5-201ENST00000516201 UBR2Q8IWV8 1755 aa8.68□□□□□ -1.02
SCARNA5-201ENST00000516201 GNAT3A8MTJ3 354 aa8.67□□□□□ -1.02
SCARNA5-201ENST00000516201 IL16Q14005 1332 aa8.67□□□□□ -1.02
SCARNA5-201ENST00000516201 MARCH10Q8NA82 808 aaPredicted RBP8.67□□□□□ -1.02
SCARNA5-201ENST00000516201 DCAF5Q96JK2 942 aa8.67□□□□□ -1.02
SCARNA5-201ENST00000516201 CICQ96RK0 1608 aaPredicted RBP8.67□□□□□ -1.02
SCARNA5-201ENST00000516201 RGPD3A6NKT7 1758 aaPredicted RBP8.66□□□□□ -1.02
SCARNA5-201ENST00000516201 RGPD4Q7Z3J3 1758 aa8.66□□□□□ -1.02
SCARNA5-201ENST00000516201 ZNF831Q5JPB2 1677 aa8.66□□□□□ -1.02
SCARNA5-201ENST00000516201 RNMTO43148 476 aaKnown RBP8.66□□□□□ -1.02
SCARNA5-201ENST00000516201 RIPK4P57078 832 aa8.66□□□□□ -1.02
SCARNA5-201ENST00000516201 C1orf141Q5JVX7 400 aa8.66□□□□□ -1.02
SCARNA5-201ENST00000516201 WWC1Q8IX03 1113 aa8.66□□□□□ -1.02
SCARNA5-201ENST00000516201 IL17REQ8NFR9 667 aa8.66□□□□□ -1.02
SCARNA5-201ENST00000516201 BTAF1O14981 1849 aa8.66□□□□□ -1.02
SCARNA5-201ENST00000516201 EP400Q96L91 3159 aa8.65□□□□□ -1.02
SCARNA5-201ENST00000516201 CACNA1FO60840 1977 aa8.65□□□□□ -1.02
SCARNA5-201ENST00000516201 ERVV-2B6SEH9 535 aa8.65□□□□□ -1.02
SCARNA5-201ENST00000516201 ZNF853P0CG23 659 aa8.65□□□□□ -1.02
SCARNA5-201ENST00000516201 WDR63Q8IWG1 891 aa8.65□□□□□ -1.02
SCARNA5-201ENST00000516201 BABAM1Q9NWV8 329 aa8.65□□□□□ -1.02
SCARNA5-201ENST00000516201 TNS1Q9HBL0 1735 aaKnown RBP8.65□□□□□ -1.03
SCARNA5-201ENST00000516201 KRT27Q7Z3Y8 459 aa8.64□□□□□ -1.03
SCARNA5-201ENST00000516201 RRP7AQ9Y3A4 280 aaKnown RBP8.64□□□□□ -1.03
SCARNA5-201ENST00000516201 LY75O60449 1722 aa8.63□□□□□ -1.03
SCARNA5-201ENST00000516201 HNRNPUQ00839 825 aaKnown RBP eCLIP8.63□□□□□ -1.03
SCARNA5-201ENST00000516201 CALD1Q05682 793 aaKnown RBP8.63□□□□□ -1.03
SCARNA5-201ENST00000516201 PDE3BQ13370 1112 aa8.63□□□□□ -1.03
SCARNA5-201ENST00000516201 MPRIPQ6WCQ1 1025 aa8.63□□□□□ -1.03
SCARNA5-201ENST00000516201 TRMT2AQ8IZ69 625 aaKnown RBP8.63□□□□□ -1.03
SCARNA5-201ENST00000516201 DDX54Q8TDD1 881 aaKnown RBP8.63□□□□□ -1.03
SCARNA5-201ENST00000516201 RTF1Q92541 710 aaKnown RBP8.63□□□□□ -1.03
SCARNA5-201ENST00000516201 SLC52A2Q9HAB3 445 aa8.63□□□□□ -1.03
SCARNA5-201ENST00000516201 LGR6Q9HBX8 967 aa8.63□□□□□ -1.03
SCARNA5-201ENST00000516201 IFT57Q9NWB7 429 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms