RNA–Protein interactions for RNA: ENST00000516052.1

SCARNA20.2-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 116 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.2-201ENST00000516052 HOXD3P31249 432 aaPredicted RBP-0.34□□□□□ -2.46
SCARNA20.2-201ENST00000516052 CEBPAP49715 358 aaPredicted RBP-0.34□□□□□ -2.46
SCARNA20.2-201ENST00000516052 HOXA4Q00056 320 aaPredicted RBP-0.34□□□□□ -2.46
SCARNA20.2-201ENST00000516052 HNRNPUQ00839 825 aaKnown RBP eCLIP-0.34□□□□□ -2.46
SCARNA20.2-201ENST00000516052 SRSF2Q01130 221 aaKnown RBP-0.34□□□□□ -2.46
SCARNA20.2-201ENST00000516052 PTPN13Q12923 2485 aa-0.34□□□□□ -2.46
SCARNA20.2-201ENST00000516052 NFE2Q16621 373 aaPredicted RBP-0.34□□□□□ -2.46
SCARNA20.2-201ENST00000516052 SPRED3Q2MJR0 410 aa-0.34□□□□□ -2.46
SCARNA20.2-201ENST00000516052 KLHL22Q53GT1 634 aa-0.34□□□□□ -2.46
SCARNA20.2-201ENST00000516052 SPDYCQ5MJ68 293 aa-0.34□□□□□ -2.46
SCARNA20.2-201ENST00000516052 ZNF648Q5T619 568 aaPredicted RBP-0.34□□□□□ -2.46
SCARNA20.2-201ENST00000516052 ATXN7L2Q5T6C5 722 aaPredicted RBP-0.34□□□□□ -2.46
SCARNA20.2-201ENST00000516052 TRIM65Q6PJ69 517 aa-0.34□□□□□ -2.46
SCARNA20.2-201ENST00000516052 OLFM4Q6UX06 510 aa-0.34□□□□□ -2.46
SCARNA20.2-201ENST00000516052 NPNTQ6UXI9 565 aa-0.34□□□□□ -2.46
SCARNA20.2-201ENST00000516052 KRTAP13-1Q8IUC0 172 aa-0.34□□□□□ -2.46
SCARNA20.2-201ENST00000516052 ZSCAN29Q8IWY8 852 aaPredicted RBP-0.34□□□□□ -2.46
SCARNA20.2-201ENST00000516052 ZFPM1Q8IX07 1006 aa-0.34□□□□□ -2.46
SCARNA20.2-201ENST00000516052 COL27A1Q8IZC6 1860 aaPredicted RBP-0.34□□□□□ -2.46
SCARNA20.2-201ENST00000516052 PELP1Q8IZL8 1130 aaKnown RBP-0.34□□□□□ -2.46
SCARNA20.2-201ENST00000516052 SIMC1Q8NDZ2 872 aa-0.34□□□□□ -2.46
SCARNA20.2-201ENST00000516052 SMARCC1Q92922 1105 aaPredicted RBP-0.34□□□□□ -2.46
SCARNA20.2-201ENST00000516052 RELTQ969Z4 430 aa-0.34□□□□□ -2.46
SCARNA20.2-201ENST00000516052 SHISA4Q96DD7 197 aa-0.34□□□□□ -2.46
SCARNA20.2-201ENST00000516052 AJUBAQ96IF1 538 aa-0.34□□□□□ -2.46
SCARNA20.2-201ENST00000516052 C20orf173Q96LM9 149 aa-0.34□□□□□ -2.46
SCARNA20.2-201ENST00000516052 BBC3Q96PG8 261 aaPredicted RBP-0.34□□□□□ -2.46
SCARNA20.2-201ENST00000516052 PHOX2BQ99453 314 aa-0.34□□□□□ -2.46
SCARNA20.2-201ENST00000516052 MLXIPLQ9NP71 852 aa-0.34□□□□□ -2.46
SCARNA20.2-201ENST00000516052 MTMR4Q9NYA4 1195 aa-0.34□□□□□ -2.46
SCARNA20.2-201ENST00000516052 MDFICQ9P1T7 246 aa-0.34□□□□□ -2.46
SCARNA20.2-201ENST00000516052 C11orf21Q9P2W6 132 aa-0.34□□□□□ -2.46
SCARNA20.2-201ENST00000516052 PRO0461Q9UI25 63 aa-0.34□□□□□ -2.46
SCARNA20.2-201ENST00000516052 DACH1Q9UI36 760 aa-0.34□□□□□ -2.46
SCARNA20.2-201ENST00000516052 NCOR1O75376 2440 aa-0.34□□□□□ -2.46
SCARNA20.2-201ENST00000516052 WNK2Q9Y3S1 2297 aa-0.34□□□□□ -2.46
SCARNA20.2-201ENST00000516052 DHX57Q6P158 1386 aaKnown RBP-0.34□□□□□ -2.46
SCARNA20.2-201ENST00000516052 GCN1Q92616 2671 aaKnown RBP-0.34□□□□□ -2.46
SCARNA20.2-201ENST00000516052 PIEZO2Q9H5I5 2752 aa-0.34□□□□□ -2.46
SCARNA20.2-201ENST00000516052 COL22A1Q8NFW1 1626 aaPredicted RBP-0.35□□□□□ -2.46
SCARNA20.2-201ENST00000516052 CHD9Q3L8U1 2897 aa-0.35□□□□□ -2.46
SCARNA20.2-201ENST00000516052 ERBB4Q15303 1308 aa-0.35□□□□□ -2.46
SCARNA20.2-201ENST00000516052 PCNX2A6NKB5 2137 aa-0.35□□□□□ -2.47
SCARNA20.2-201ENST00000516052 JMJD1CQ15652 2540 aa-0.35□□□□□ -2.47
SCARNA20.2-201ENST00000516052 CACNA1CQ13936 2221 aa-0.35□□□□□ -2.47
SCARNA20.2-201ENST00000516052 ERI2A8K979 691 aaKnown RBP-0.35□□□□□ -2.47
SCARNA20.2-201ENST00000516052 KRTAP16-1A8MUX0 517 aa-0.35□□□□□ -2.47
SCARNA20.2-201ENST00000516052 KRT86O43790 486 aa-0.35□□□□□ -2.47
SCARNA20.2-201ENST00000516052 PLEKHG5O94827 1062 aa-0.35□□□□□ -2.47
SCARNA20.2-201ENST00000516052 DDNO94850 711 aaPredicted RBP-0.35□□□□□ -2.47
SCARNA20.2-201ENST00000516052 WNT11O96014 354 aa-0.35□□□□□ -2.47
SCARNA20.2-201ENST00000516052 GLI1P08151 1106 aa-0.35□□□□□ -2.47
SCARNA20.2-201ENST00000516052 ARL14EPLP0DKL9 152 aa-0.35□□□□□ -2.47
SCARNA20.2-201ENST00000516052 KRT3P12035 628 aa-0.35□□□□□ -2.47
SCARNA20.2-201ENST00000516052 NID1P14543 1247 aa-0.35□□□□□ -2.47
SCARNA20.2-201ENST00000516052 HNRNPLP14866 589 aaKnown RBP eCLIP-0.35□□□□□ -2.47
SCARNA20.2-201ENST00000516052 TNFRSF1AP19438 455 aa-0.35□□□□□ -2.47
SCARNA20.2-201ENST00000516052 BMP6P22004 513 aa-0.35□□□□□ -2.47
SCARNA20.2-201ENST00000516052 CBLP22681 906 aa-0.35□□□□□ -2.47
SCARNA20.2-201ENST00000516052 PTGS2P35354 604 aa-0.35□□□□□ -2.47
SCARNA20.2-201ENST00000516052 HILS1P60008 231 aa-0.35□□□□□ -2.47
SCARNA20.2-201ENST00000516052 NANOS3P60323 173 aaKnown RBP-0.35□□□□□ -2.47
SCARNA20.2-201ENST00000516052 SKOR1P84550 965 aa-0.35□□□□□ -2.47
SCARNA20.2-201ENST00000516052 MAPK7Q13164 816 aa-0.35□□□□□ -2.47
SCARNA20.2-201ENST00000516052 SF3B4Q15427 424 aaKnown RBP eCLIP-0.35□□□□□ -2.47
SCARNA20.2-201ENST00000516052 ECM1Q16610 540 aa-0.35□□□□□ -2.47
SCARNA20.2-201ENST00000516052 SMN1Q16637 294 aaKnown RBP-0.35□□□□□ -2.47
SCARNA20.2-201ENST00000516052 NBPF20Q3BBV1 942 aa-0.35□□□□□ -2.47
SCARNA20.2-201ENST00000516052 KRTAP13-2Q52LG2 175 aa-0.35□□□□□ -2.47
SCARNA20.2-201ENST00000516052 CYB5RLQ6IPT4 315 aa-0.35□□□□□ -2.47
SCARNA20.2-201ENST00000516052 NBPF10Q6P3W6 841 aaKnown RBP-0.35□□□□□ -2.47
SCARNA20.2-201ENST00000516052 LMOD2Q6P5Q4 547 aa-0.35□□□□□ -2.47
SCARNA20.2-201ENST00000516052 CRELD2Q6UXH1 353 aaPredicted RBP-0.35□□□□□ -2.47
SCARNA20.2-201ENST00000516052 MPRIPQ6WCQ1 1025 aa-0.35□□□□□ -2.47
SCARNA20.2-201ENST00000516052 RAPH1Q70E73 1250 aa-0.35□□□□□ -2.47
SCARNA20.2-201ENST00000516052 TMPRSS7Q7RTY8 843 aa-0.35□□□□□ -2.47
SCARNA20.2-201ENST00000516052 C9orf106Q8NAJ2 232 aa-0.35□□□□□ -2.47
SCARNA20.2-201ENST00000516052 DNERQ8NFT8 737 aa-0.35□□□□□ -2.47
SCARNA20.2-201ENST00000516052 IRF7Q92985 503 aa-0.35□□□□□ -2.47
SCARNA20.2-201ENST00000516052 MAP6Q96JE9 813 aa-0.35□□□□□ -2.47
SCARNA20.2-201ENST00000516052 TRIM47Q96LD4 638 aa-0.35□□□□□ -2.47
SCARNA20.2-201ENST00000516052 UHRF2Q96PU4 802 aa-0.35□□□□□ -2.47
SCARNA20.2-201ENST00000516052 CRAMP1Q96RY5 1269 aa-0.35□□□□□ -2.47
SCARNA20.2-201ENST00000516052 HERPUD2Q9BSE4 406 aa-0.35□□□□□ -2.47
SCARNA20.2-201ENST00000516052 ADGRE3Q9BY15 652 aa-0.35□□□□□ -2.47
SCARNA20.2-201ENST00000516052 FZD8Q9H461 694 aa-0.35□□□□□ -2.47
SCARNA20.2-201ENST00000516052 SGK2Q9HBY8 427 aa-0.35□□□□□ -2.47
SCARNA20.2-201ENST00000516052 GMPR2Q9P2T1 348 aaKnown RBP-0.35□□□□□ -2.47
SCARNA20.2-201ENST00000516052 DKK2Q9UBU2 259 aa-0.35□□□□□ -2.47
SCARNA20.2-201ENST00000516052 METRNQ9UJH8 293 aa-0.35□□□□□ -2.47
SCARNA20.2-201ENST00000516052 PDZRN3Q9UPQ7 1066 aa-0.35□□□□□ -2.47
SCARNA20.2-201ENST00000516052 MUC4Q99102 2169 aa-0.35□□□□□ -2.47
SCARNA20.2-201ENST00000516052 CROCCQ5TZA2 2017 aa-0.35□□□□□ -2.47
SCARNA20.2-201ENST00000516052 SVEP1Q4LDE5 3571 aa-0.35□□□□□ -2.47
SCARNA20.2-201ENST00000516052 NBEAQ8NFP9 2946 aa-0.35□□□□□ -2.47
SCARNA20.2-201ENST00000516052 FASNP49327 2511 aaKnown RBP-0.35□□□□□ -2.47
SCARNA20.2-201ENST00000516052 ITPR1Q14643 2758 aa-0.35□□□□□ -2.47
SCARNA20.2-201ENST00000516052 ZFC3H1O60293 1989 aaKnown RBP-0.36□□□□□ -2.47
SCARNA20.2-201ENST00000516052 EYSQ5T1H1 3165 aa-0.36□□□□□ -2.47
SCARNA20.2-201ENST00000516052 TEX15Q9BXT5 2789 aa-0.36□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms