RNA–Protein interactions for RNA: ENST00000515499.5

TRIM41-208, Transcript of tripartite motif containing 41, humanhuman

TSL 3

Gene TRIM41, Length 914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-208ENST00000515499 AEBP1Q8IUX7 1158 aa27.9■■■□□ 2.06
TRIM41-208ENST00000515499 PLEKHG2Q9H7P9 1386 aa27.89■■■□□ 2.06
TRIM41-208ENST00000515499 MARCH10Q8NA82 808 aaPredicted RBP27.89■■■□□ 2.06
TRIM41-208ENST00000515499 FAM182BQ5T319 152 aa27.88■■■□□ 2.05
TRIM41-208ENST00000515499 FAM196AQ6ZSG2 479 aa27.88■■■□□ 2.05
TRIM41-208ENST00000515499 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.88■■■□□ 2.05
TRIM41-208ENST00000515499 HMOX1P09601 288 aa27.85■■■□□ 2.05
TRIM41-208ENST00000515499 DDX54Q8TDD1 881 aaKnown RBP27.85■■■□□ 2.05
TRIM41-208ENST00000515499 SPG7Q9UQ90 795 aa27.85■■■□□ 2.05
TRIM41-208ENST00000515499 SOCS7O14512 581 aa27.84■■■□□ 2.05
TRIM41-208ENST00000515499 PKD1L3Q7Z443 1732 aa27.83■■■□□ 2.05
TRIM41-208ENST00000515499 BCL9O00512 1426 aa27.83■■■□□ 2.05
TRIM41-208ENST00000515499 U2AF1L5P0DN76 240 aaPredicted RBP27.82■■■□□ 2.04
TRIM41-208ENST00000515499 U2AF1Q01081 240 aaKnown RBP eCLIP27.82■■■□□ 2.04
TRIM41-208ENST00000515499 AMOTQ4VCS5 1084 aa27.82■■■□□ 2.04
TRIM41-208ENST00000515499 PLEKHO1Q53GL0 409 aaPredicted RBP27.82■■■□□ 2.04
TRIM41-208ENST00000515499 PCDH11XQ9BZA7 1347 aa27.82■■■□□ 2.04
TRIM41-208ENST00000515499 PCDH11YQ9BZA8 1340 aa27.82■■■□□ 2.04
TRIM41-208ENST00000515499 SHANK3Q9BYB0 1731 aa27.81■■■□□ 2.04
TRIM41-208ENST00000515499 UPF1Q92900 1129 aaKnown RBP eCLIP27.79■■■□□ 2.044e-6■■■■□ 26.2
TRIM41-208ENST00000515499 EP400Q96L91 3159 aa27.79■■■□□ 2.04
TRIM41-208ENST00000515499 CYP27B1O15528 508 aa27.78■■■□□ 2.04
TRIM41-208ENST00000515499 FCHSD2O94868 740 aa27.78■■■□□ 2.04
TRIM41-208ENST00000515499 CCDC125Q86Z20 511 aa27.78■■■□□ 2.04
TRIM41-208ENST00000515499 RSPH6AQ9H0K4 717 aa27.77■■■□□ 2.04
TRIM41-208ENST00000515499 IFNL2Q8IZJ0 200 aa27.75■■■□□ 2.03
TRIM41-208ENST00000515499 PRKAR2BP31323 418 aa27.74■■■□□ 2.03
TRIM41-208ENST00000515499 PHKG2P15735 406 aa27.73■■■□□ 2.03
TRIM41-208ENST00000515499 NKX1-1Q15270 411 aaPredicted RBP27.73■■■□□ 2.03
TRIM41-208ENST00000515499 SBF2Q86WG5 1849 aa27.72■■■□□ 2.03
TRIM41-208ENST00000515499 TRIM37O94972 964 aa27.72■■■□□ 2.03
TRIM41-208ENST00000515499 ZNF530Q6P9A1 599 aaPredicted RBP27.72■■■□□ 2.03
TRIM41-208ENST00000515499 DIEXFQ68CQ4 756 aaKnown RBP27.71■■■□□ 2.03
TRIM41-208ENST00000515499 PNNQ9H307 717 aaKnown RBP27.71■■■□□ 2.03
TRIM41-208ENST00000515499 SF3B2Q13435 895 aaKnown RBP27.7■■■□□ 2.02
TRIM41-208ENST00000515499 WDR43Q15061 677 aaKnown RBP eCLIP27.7■■■□□ 2.02
TRIM41-208ENST00000515499 MTHFSDQ2M296 383 aaKnown RBP27.69■■■□□ 2.02
TRIM41-208ENST00000515499 CCDC184Q52MB2 194 aa27.69■■■□□ 2.02
TRIM41-208ENST00000515499 C1orf141Q5JVX7 400 aa27.69■■■□□ 2.02
TRIM41-208ENST00000515499 BCL11BQ9C0K0 894 aaPredicted RBP27.69■■■□□ 2.02
TRIM41-208ENST00000515499 HSP90AB1P08238 724 aaKnown RBP27.68■■■□□ 2.02
TRIM41-208ENST00000515499 ACSBG1Q96GR2 724 aa27.68■■■□□ 2.02
TRIM41-208ENST00000515499 PHACTR3Q96KR7 559 aa27.68■■■□□ 2.02
TRIM41-208ENST00000515499 AKAP4Q5JQC9 854 aa27.67■■■□□ 2.02
TRIM41-208ENST00000515499 GAS2L2Q8NHY3 880 aa27.67■■■□□ 2.02
TRIM41-208ENST00000515499 PLEKHF1Q96S99 279 aa27.66■■■□□ 2.02
TRIM41-208ENST00000515499 MRS2Q9HD23 443 aa27.66■■■□□ 2.02
TRIM41-208ENST00000515499 KAT6BQ8WYB5 2073 aa27.65■■■□□ 2.02
TRIM41-208ENST00000515499 KCNQ2O43526 872 aa27.65■■■□□ 2.02
TRIM41-208ENST00000515499 NEFMP07197 916 aa27.65■■■□□ 2.02
TRIM41-208ENST00000515499 NHSQ6T4R5 1651 aa27.65■■■□□ 2.02
TRIM41-208ENST00000515499 PRIM1P49642 420 aaKnown RBP27.64■■■□□ 2.02
TRIM41-208ENST00000515499 DCAF5Q96JK2 942 aa27.64■■■□□ 2.02
TRIM41-208ENST00000515499 ADAMTS8Q9UP79 889 aa27.64■■■□□ 2.02
TRIM41-208ENST00000515499 PTF1AQ7RTS3 328 aa27.63■■■□□ 2.01
TRIM41-208ENST00000515499 TNS1Q9HBL0 1735 aaKnown RBP27.63■■■□□ 2.01
TRIM41-208ENST00000515499 DOT1LQ8TEK3 1739 aa27.62■■■□□ 2.01
TRIM41-208ENST00000515499 APBA3O96018 575 aa27.62■■■□□ 2.01
TRIM41-208ENST00000515499 BAG6P46379 1132 aa27.61■■■□□ 2.01
TRIM41-208ENST00000515499 SYTL4Q96C24 671 aaPredicted RBP27.61■■■□□ 2.01
TRIM41-208ENST00000515499 PNISRQ8TF01 805 aaKnown RBP27.6■■■□□ 2.01
TRIM41-208ENST00000515499 MAPK8IP3Q9UPT6 1336 aa27.6■■■□□ 2.01
TRIM41-208ENST00000515499 ERVV-2B6SEH9 535 aa27.59■■■□□ 2.01
TRIM41-208ENST00000515499 MPRIPQ6WCQ1 1025 aa27.59■■■□□ 2.01
TRIM41-208ENST00000515499 TOGARAM1Q9Y4F4 1720 aa27.58■■■□□ 2.01
TRIM41-208ENST00000515499 GNAT3A8MTJ3 354 aa27.58■■■□□ 2.01
TRIM41-208ENST00000515499 KDM6AO15550 1401 aaPredicted RBP27.58■■■□□ 2
TRIM41-208ENST00000515499 DEFB132Q7Z7B7 95 aa27.57■■■□□ 2
TRIM41-208ENST00000515499 MAP3K5Q99683 1374 aa27.57■■■□□ 2
TRIM41-208ENST00000515499 PLSCR1O15162 318 aa27.56■■■□□ 2
TRIM41-208ENST00000515499 RUNDC1Q96C34 613 aa27.56■■■□□ 2
TRIM41-208ENST00000515499 BTAF1O14981 1849 aa27.55■■■□□ 2
TRIM41-208ENST00000515499 ITGB4P16144 1822 aa27.55■■■□□ 2
TRIM41-208ENST00000515499 CCER2I3L3R5 266 aa27.54■■■□□ 2
TRIM41-208ENST00000515499 RNMTO43148 476 aaKnown RBP27.54■■■□□ 2
TRIM41-208ENST00000515499 EN1Q05925 392 aaPredicted RBP27.54■■■□□ 2
TRIM41-208ENST00000515499 NFE2L2Q16236 605 aa27.54■■■□□ 2
TRIM41-208ENST00000515499 LGR6Q9HBX8 967 aa27.54■■■□□ 2
TRIM41-208ENST00000515499 TMOD3Q9NYL9 352 aa27.54■■■□□ 2
TRIM41-208ENST00000515499 SCN11AQ9UI33 1791 aa27.53■■■□□ 2
TRIM41-208ENST00000515499 CCDC146Q8IYE0 955 aa27.53■■■□□ 2
TRIM41-208ENST00000515499 PIGBQ92521 554 aa27.53■■■□□ 2
TRIM41-208ENST00000515499 HTATSF1O43719 755 aaKnown RBP27.52■■■□□ 2
TRIM41-208ENST00000515499 CABP4P57796 275 aa27.52■■■□□ 2
TRIM41-208ENST00000515499 CAMKK2Q96RR4 588 aa27.52■■■□□ 2
TRIM41-208ENST00000515499 ADAMTS7Q9UKP4 1686 aa27.52■■■□□ 2
TRIM41-208ENST00000515499 IL17REQ8NFR9 667 aa27.5■■□□□ 1.99
TRIM41-208ENST00000515499 RTF1Q92541 710 aaKnown RBP27.5■■□□□ 1.99
TRIM41-208ENST00000515499 NFATC2IPQ8NCF5 419 aa27.49■■□□□ 1.99
TRIM41-208ENST00000515499 RGPD3A6NKT7 1758 aaPredicted RBP27.48■■□□□ 1.99
TRIM41-208ENST00000515499 RGPD4Q7Z3J3 1758 aa27.48■■□□□ 1.99
TRIM41-208ENST00000515499 EZH2Q15910 746 aaKnown RBP27.48■■□□□ 1.99
TRIM41-208ENST00000515499 MIER1Q8N108 512 aa27.48■■□□□ 1.99
TRIM41-208ENST00000515499 SLC52A2Q9HAB3 445 aa27.48■■□□□ 1.99
TRIM41-208ENST00000515499 VIRMAQ69YN4 1812 aaKnown RBP27.48■■□□□ 1.99
TRIM41-208ENST00000515499 TMPOP42166 694 aaKnown RBP27.47■■□□□ 1.99
TRIM41-208ENST00000515499 CEMIPQ8WUJ3 1361 aa27.47■■□□□ 1.99
TRIM41-208ENST00000515499 DLG5Q8TDM6 1919 aa27.46■■□□□ 1.99
TRIM41-208ENST00000515499 RIPK4P57078 832 aa27.46■■□□□ 1.99
TRIM41-208ENST00000515499 SMARCC1Q92922 1105 aaPredicted RBP27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms