RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 K7ELQ4 463 aaPredicted RBP18.94■□□□□ 0.62
TRIM41-207ENST00000515223 ZNF287Q9HBT7 754 aa18.94■□□□□ 0.62
TRIM41-207ENST00000515223 ESPNB1AK53 854 aa18.94■□□□□ 0.62
TRIM41-207ENST00000515223 TMOD3Q9NYL9 352 aa18.94■□□□□ 0.62
TRIM41-207ENST00000515223 ABCC5O15440 1437 aa18.94■□□□□ 0.62
TRIM41-207ENST00000515223 TROQ12816 1431 aaPredicted RBP18.94■□□□□ 0.62
TRIM41-207ENST00000515223 ZNF76P36508 570 aa18.93■□□□□ 0.62
TRIM41-207ENST00000515223 AACSQ86V21 672 aa18.93■□□□□ 0.62
TRIM41-207ENST00000515223 FMNL2Q96PY5 1086 aa18.93■□□□□ 0.62
TRIM41-207ENST00000515223 BRPF1P55201 1214 aaPredicted RBP18.93■□□□□ 0.62
TRIM41-207ENST00000515223 SRGAP3O43295 1099 aa18.93■□□□□ 0.62
TRIM41-207ENST00000515223 SMC2O95347 1197 aa18.93■□□□□ 0.62
TRIM41-207ENST00000515223 TRIM5Q9C035 493 aa18.93■□□□□ 0.62
TRIM41-207ENST00000515223 RPRD2Q5VT52 1461 aaKnown RBP18.93■□□□□ 0.62
TRIM41-207ENST00000515223 TTLL5Q6EMB2 1281 aa18.92■□□□□ 0.62
TRIM41-207ENST00000515223 WDR63Q8IWG1 891 aa18.92■□□□□ 0.62
TRIM41-207ENST00000515223 DACH1Q9UI36 760 aa18.92■□□□□ 0.62
TRIM41-207ENST00000515223 ATF7IPQ6VMQ6 1270 aa18.92■□□□□ 0.62
TRIM41-207ENST00000515223 NUDT16Q96DE0 195 aaKnown RBP18.92■□□□□ 0.62
TRIM41-207ENST00000515223 RRS1Q15050 365 aaKnown RBP18.91■□□□□ 0.62
TRIM41-207ENST00000515223 ERCC4Q92889 916 aaPredicted RBP18.91■□□□□ 0.62
TRIM41-207ENST00000515223 CHD1LQ86WJ1 897 aa18.91■□□□□ 0.62
TRIM41-207ENST00000515223 AEBP1Q8IUX7 1158 aa18.91■□□□□ 0.62
TRIM41-207ENST00000515223 DUSP27Q5VZP5 1158 aa18.91■□□□□ 0.62
TRIM41-207ENST00000515223 TBC1D2Q9BYX2 928 aa18.91■□□□□ 0.62
TRIM41-207ENST00000515223 GNAT3A8MTJ3 354 aa18.9■□□□□ 0.62
TRIM41-207ENST00000515223 DESP17661 470 aa18.9■□□□□ 0.62
TRIM41-207ENST00000515223 ZNF428Q96B54 188 aa18.9■□□□□ 0.62
TRIM41-207ENST00000515223 TSPY26PQ9H489 355 aa18.9■□□□□ 0.62
TRIM41-207ENST00000515223 ABCF2Q9UG63 623 aa18.9■□□□□ 0.62
TRIM41-207ENST00000515223 CCP110O43303 1012 aa18.9■□□□□ 0.62
TRIM41-207ENST00000515223 FCHSD2O94868 740 aa18.9■□□□□ 0.62
TRIM41-207ENST00000515223 NGLY1Q96IV0 654 aa18.9■□□□□ 0.62
TRIM41-207ENST00000515223 IDH1O75874 414 aaKnown RBP18.89■□□□□ 0.62
TRIM41-207ENST00000515223 CEBPZQ03701 1054 aaKnown RBP18.89■□□□□ 0.62
TRIM41-207ENST00000515223 DCTN1Q14203 1278 aa18.89■□□□□ 0.62
TRIM41-207ENST00000515223 CAVIN4Q5BKX8 364 aa18.89■□□□□ 0.62
TRIM41-207ENST00000515223 DMRT2Q9Y5R5 561 aa18.89■□□□□ 0.61
TRIM41-207ENST00000515223 IGHDP01880 384 aa18.89■□□□□ 0.61
TRIM41-207ENST00000515223 SSBP05455 408 aaKnown RBP eCLIP18.89■□□□□ 0.61
TRIM41-207ENST00000515223 HMGXB3Q12766 1538 aa18.89■□□□□ 0.61
TRIM41-207ENST00000515223 PTCD1O75127 700 aaKnown RBP18.89■□□□□ 0.61
TRIM41-207ENST00000515223 TXLNBQ8N3L3 684 aa18.89■□□□□ 0.61
TRIM41-207ENST00000515223 TRIM21P19474 475 aaKnown RBP18.89■□□□□ 0.61
TRIM41-207ENST00000515223 METTL24Q5JXM2 366 aa18.89■□□□□ 0.61
TRIM41-207ENST00000515223 TANGO6Q9C0B7 1094 aa18.89■□□□□ 0.61
TRIM41-207ENST00000515223 FIBPO43427 364 aa18.88■□□□□ 0.61
TRIM41-207ENST00000515223 ADAMTS2O95450 1211 aa18.88■□□□□ 0.61
TRIM41-207ENST00000515223 BLOC1S2Q6QNY1 142 aa18.88■□□□□ 0.61
TRIM41-207ENST00000515223 AIDAQ96BJ3 306 aa18.88■□□□□ 0.61
TRIM41-207ENST00000515223 IFIT1P09914 478 aaKnown RBP18.88■□□□□ 0.61
TRIM41-207ENST00000515223 CRACR2BQ8N4Y2 399 aaPredicted RBP18.88■□□□□ 0.61
TRIM41-207ENST00000515223 NKTRP30414 1462 aaKnown RBP18.88■□□□□ 0.61
TRIM41-207ENST00000515223 AKAP2Q9Y2D5 859 aa18.88■□□□□ 0.61
TRIM41-207ENST00000515223 STK3Q13188 491 aa18.88■□□□□ 0.61
TRIM41-207ENST00000515223 KRT32Q14532 448 aa18.88■□□□□ 0.61
TRIM41-207ENST00000515223 CAMSAP2Q08AD1 1489 aa18.87■□□□□ 0.61
TRIM41-207ENST00000515223 ME1P48163 572 aa18.87■□□□□ 0.61
TRIM41-207ENST00000515223 TMEM57Q8N5G2 664 aa18.87■□□□□ 0.61
TRIM41-207ENST00000515223 WASF1Q92558 559 aa18.87■□□□□ 0.61
TRIM41-207ENST00000515223 CCDC85AQ96PX6 553 aaPredicted RBP18.87■□□□□ 0.61
TRIM41-207ENST00000515223 BIVM-ERCC5R4GMW8 1640 aa18.86■□□□□ 0.61
TRIM41-207ENST00000515223 DEF6Q9H4E7 631 aa18.86■□□□□ 0.61
TRIM41-207ENST00000515223 ERLIN2O94905 339 aa18.86■□□□□ 0.61
TRIM41-207ENST00000515223 DHX8Q14562 1220 aaKnown RBP18.86■□□□□ 0.61
TRIM41-207ENST00000515223 TNIP1Q15025 636 aa18.86■□□□□ 0.61
TRIM41-207ENST00000515223 USP5P45974 858 aa18.86■□□□□ 0.61
TRIM41-207ENST00000515223 MATR3P43243 847 aaKnown RBP eCLIP18.86■□□□□ 0.61
TRIM41-207ENST00000515223 RARSP54136 660 aaKnown RBP18.86■□□□□ 0.61
TRIM41-207ENST00000515223 AMOTQ4VCS5 1084 aa18.85■□□□□ 0.61
TRIM41-207ENST00000515223 HSP90AB3PQ58FF7 597 aa18.85■□□□□ 0.61
TRIM41-207ENST00000515223 UQCRHLA0A096LP55 91 aa18.85■□□□□ 0.61
TRIM41-207ENST00000515223 UQCRHP07919 91 aa18.85■□□□□ 0.61
TRIM41-207ENST00000515223 LARP1Q6PKG0 1096 aaKnown RBP18.85■□□□□ 0.61
TRIM41-207ENST00000515223 DNAI2Q9GZS0 605 aa18.85■□□□□ 0.61
TRIM41-207ENST00000515223 LRPPRCP42704 1394 aaKnown RBP18.84■□□□□ 0.61
TRIM41-207ENST00000515223 DNMBPQ6XZF7 1577 aa18.84■□□□□ 0.61
TRIM41-207ENST00000515223 SERPINC1P01008 464 aa18.84■□□□□ 0.61
TRIM41-207ENST00000515223 POLR3DP05423 398 aaPredicted RBP18.84■□□□□ 0.61
TRIM41-207ENST00000515223 PPFIBP1Q86W92 1011 aa18.84■□□□□ 0.61
TRIM41-207ENST00000515223 ANKIB1Q9P2G1 1089 aa18.84■□□□□ 0.61
TRIM41-207ENST00000515223 NEFHP12036 1026 aa18.84■□□□□ 0.61
TRIM41-207ENST00000515223 PAXIP1Q6ZW49 1069 aaPredicted RBP18.84■□□□□ 0.61
TRIM41-207ENST00000515223 NFE2L2Q16236 605 aa18.84■□□□□ 0.61
TRIM41-207ENST00000515223 IMMTQ16891 758 aaKnown RBP18.84■□□□□ 0.61
TRIM41-207ENST00000515223 MAP7D2Q96T17 732 aa18.84■□□□□ 0.61
TRIM41-207ENST00000515223 KRT85P78386 507 aa18.83■□□□□ 0.61
TRIM41-207ENST00000515223 TTLL12Q14166 644 aaPredicted RBP18.83■□□□□ 0.61
TRIM41-207ENST00000515223 SPC24Q8NBT2 197 aa18.83■□□□□ 0.6
TRIM41-207ENST00000515223 DISP3Q9P2K9 1392 aa18.83■□□□□ 0.6
TRIM41-207ENST00000515223 MAP4K4O95819 1239 aaPredicted RBP18.83■□□□□ 0.6
TRIM41-207ENST00000515223 ZRSR2Q15696 482 aaKnown RBP18.83■□□□□ 0.6
TRIM41-207ENST00000515223 RPAP2Q8IXW5 612 aaPredicted RBP18.83■□□□□ 0.6
TRIM41-207ENST00000515223 LARP1BQ659C4 914 aaKnown RBP18.82■□□□□ 0.6
TRIM41-207ENST00000515223 WDR33Q9C0J8 1336 aaKnown RBP18.82■□□□□ 0.6
TRIM41-207ENST00000515223 RRP9O43818 475 aaKnown RBP18.82■□□□□ 0.6
TRIM41-207ENST00000515223 NEBLO76041 1014 aa18.82■□□□□ 0.6
TRIM41-207ENST00000515223 RPGRQ92834 1020 aaKnown RBP18.82■□□□□ 0.6
TRIM41-207ENST00000515223 NSD3Q9BZ95 1437 aa18.82■□□□□ 0.6
TRIM41-207ENST00000515223 EXOC5O00471 708 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms